Experiment set5IT024 for Klebsiella michiganensis M5al

Compare to:

Cytidine carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS17975 +1.6 5.4 tail-specific protease compare
BWI76_RS09150 +1.5 6.4 DNA-binding transcriptional repressor DeoR compare
BWI76_RS08275 +1.2 2.5 LexA regulated protein compare
BWI76_RS19770 +1.2 3.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS24575 +1.1 1.6 hypothetical protein compare
BWI76_RS16965 +1.1 3.7 murein lipoprotein compare
BWI76_RS18770 +1.1 1.6 DNA gyrase inhibitor compare
BWI76_RS10060 +1.0 2.2 acylphosphatase compare
BWI76_RS24080 +1.0 2.0 DUF179 domain-containing protein compare
BWI76_RS11440 +1.0 1.7 hypothetical protein compare
BWI76_RS09335 +1.0 1.6 baseplate assembly protein W compare
BWI76_RS11520 +0.9 1.4 hypothetical protein compare
BWI76_RS17045 +0.9 1.5 hypothetical protein compare
BWI76_RS18125 +0.9 2.0 murein DD-endopeptidase MepM compare
BWI76_RS25485 +0.9 1.8 septum formation protein Maf compare
BWI76_RS07475 +0.9 1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS01540 +0.9 2.1 thiamine biosynthesis protein ThiS compare
BWI76_RS25285 +0.8 1.1 HPr family phosphocarrier protein compare
BWI76_RS18360 +0.8 1.6 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS16935 +0.8 1.3 shikimate dehydrogenase compare
BWI76_RS07885 +0.8 1.6 sugar ABC transporter permease compare
BWI76_RS16260 +0.8 2.2 two-component sensor histidine kinase compare
BWI76_RS23015 +0.8 1.6 cobalt transporter ATP-binding subunit compare
BWI76_RS27670 +0.8 2.5 LysR family transcriptional regulator compare
BWI76_RS18780 +0.8 2.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS22935 +0.8 1.7 L-fucose mutarotase compare
BWI76_RS25935 +0.8 2.1 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS11700 +0.8 1.3 hypothetical protein compare
BWI76_RS23040 +0.8 2.8 sirohydrochlorin cobaltochelatase compare
BWI76_RS23900 +0.8 2.1 hypothetical protein compare
BWI76_RS06665 +0.8 0.9 membrane protein compare
BWI76_RS06805 +0.8 1.9 primosomal replication protein N'' compare
BWI76_RS24385 +0.8 5.3 phosphodiesterase compare
BWI76_RS11250 +0.7 1.2 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS12040 +0.7 1.2 hypothetical protein compare
BWI76_RS15150 +0.7 3.0 outer membrane efflux protein compare
BWI76_RS10745 +0.7 1.3 hypothetical protein compare
BWI76_RS24885 +0.7 1.4 PTS galactitol transporter subunit IIB compare
BWI76_RS21565 +0.7 1.2 outer membrane protein assembly factor BamE compare
BWI76_RS26660 +0.7 2.5 transcription elongation factor GreB compare
BWI76_RS09080 +0.7 2.5 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS23690 +0.7 1.2 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS20050 +0.7 1.5 hypothetical protein compare
BWI76_RS23005 +0.7 1.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS04305 +0.7 0.7 molecular chaperone DnaJ compare
BWI76_RS14680 +0.7 2.7 SefF compare
BWI76_RS00715 +0.7 1.6 two-component sensor histidine kinase compare
BWI76_RS14770 +0.7 1.3 PTS IIA 2 domain protein compare
BWI76_RS02680 +0.7 2.3 EamA family transporter compare
BWI76_RS23255 +0.7 2.7 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS16900 +0.7 1.0 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS18240 +0.7 1.6 L-arabinose ABC transporter permease AraH compare
BWI76_RS20900 +0.7 0.9 outer membrane protein assembly factor BamC compare
BWI76_RS02875 +0.7 3.9 membrane protein compare
BWI76_RS04565 +0.7 2.5 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS00765 +0.7 3.8 DNA-binding transcriptional regulator CytR compare
BWI76_RS06405 +0.7 1.6 2-dehydropantoate 2-reductase compare
BWI76_RS18175 +0.7 3.1 hydrolase compare
BWI76_RS01815 +0.7 2.3 phosphate-starvation-inducible protein PsiE compare
BWI76_RS12780 +0.7 2.2 hypothetical protein compare
BWI76_RS05410 +0.7 3.5 2,5-didehydrogluconate reductase B compare
BWI76_RS02880 +0.7 2.5 membrane protein compare
BWI76_RS24925 +0.7 1.3 DnaA initiator-associating protein DiaA compare
BWI76_RS14610 +0.6 2.1 putative hydrolase compare
BWI76_RS15035 +0.6 1.0 metal ABC transporter permease compare
BWI76_RS07165 +0.6 2.5 hypothetical protein compare
BWI76_RS25480 +0.6 1.6 ribonuclease E/G compare
BWI76_RS23125 +0.6 1.1 propanediol dehydratase small subunit compare
BWI76_RS00725 +0.6 1.9 periplasmic repressor CpxP compare
BWI76_RS01190 +0.6 1.3 iron donor protein CyaY compare
BWI76_RS11890 +0.6 1.8 glycosyl hydrolase compare
BWI76_RS17570 +0.6 1.5 iron-sulfur-binding protein compare
BWI76_RS26945 +0.6 2.0 hypothetical protein compare
BWI76_RS22090 +0.6 1.8 transcriptional regulator compare
BWI76_RS26575 +0.6 2.2 universal stress protein B compare
BWI76_RS23140 +0.6 1.0 carboxysome shell protein compare
BWI76_RS20360 +0.6 0.8 cell division protein DedD compare
BWI76_RS04990 +0.6 2.4 pantoate--beta-alanine ligase compare
BWI76_RS08750 +0.6 1.1 kinase inhibitor compare
BWI76_RS16075 +0.6 1.0 oxidoreductase compare
BWI76_RS05555 +0.6 1.5 Crl family RNA polymerase assembly factor compare
BWI76_RS16460 +0.6 1.8 oxidoreductase compare
BWI76_RS15605 +0.6 1.1 hypothetical protein compare
BWI76_RS15970 +0.6 1.7 carboxypeptidase M32 compare
BWI76_RS01585 +0.6 2.3 transcriptional regulator compare
BWI76_RS16795 +0.6 1.7 amino acid ABC transporter ATPase compare
BWI76_RS20025 +0.6 2.4 HAMP domain-containing histidine kinase compare
BWI76_RS18070 +0.6 2.0 DNA polymerase III subunit epsilon compare
BWI76_RS15775 +0.6 1.6 replication protein compare
BWI76_RS19870 +0.6 1.7 malate:quinone oxidoreductase compare
BWI76_RS25915 +0.5 1.2 protein SlyX compare
BWI76_RS18650 +0.5 2.3 fimbrial protein compare
BWI76_RS11435 +0.5 1.3 hypothetical protein compare
BWI76_RS23000 +0.5 2.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
BWI76_RS13195 +0.5 1.1 glutamate dehydrogenase compare
BWI76_RS06475 +0.5 0.6 protoheme IX farnesyltransferase compare
BWI76_RS00335 +0.5 1.6 hypothetical protein compare
BWI76_RS13405 +0.5 1.8 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS17350 +0.5 2.0 DNA-binding response regulator compare
BWI76_RS15260 +0.5 1.2 hypothetical protein compare
BWI76_RS10955 +0.5 1.3 hypothetical protein compare
BWI76_RS23320 +0.5 1.0 hypothetical protein compare
BWI76_RS07640 +0.5 1.1 short chain dehydrogenase compare
BWI76_RS06570 +0.5 2.2 thiamin pyrimidine pyrophosphate hydrolase compare
BWI76_RS13400 +0.5 1.3 GntR family transcriptional regulator compare
BWI76_RS27675 +0.5 2.2 EmrB/QacA family drug resistance transporter compare
BWI76_RS16015 +0.5 1.2 pheromone autoinducer 2 transporter compare
BWI76_RS12485 +0.5 1.8 TyrR family transcriptional regulator compare
BWI76_RS18225 +0.5 1.3 universal stress protein C compare
BWI76_RS16175 +0.5 2.3 p-aminobenzoyl-glutamate transporter compare
BWI76_RS16040 +0.5 1.7 biotin-independent malonate decarboxylase subunit gamma compare
BWI76_RS27835 +0.5 1.1 acyltransferase compare
BWI76_RS27200 +0.5 1.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS08840 +0.5 2.5 hypothetical protein compare
BWI76_RS16930 +0.5 3.5 transcriptional regulator compare
BWI76_RS22070 +0.5 2.0 proline/betaine ABC transporter permease ProW compare
BWI76_RS13980 +0.5 1.0 hypothetical protein compare
BWI76_RS13415 +0.5 2.0 spermidine/putrescine ABC transporter permease compare
BWI76_RS06410 +0.5 2.4 YajQ family cyclic di-GMP-binding protein compare
BWI76_RS02870 +0.5 1.1 hypothetical protein compare
BWI76_RS00720 +0.5 1.0 DNA-binding response regulator compare
BWI76_RS09195 +0.5 0.6 N-acetyltransferase compare
BWI76_RS05465 +0.5 0.8 amidohydrolase compare
BWI76_RS19835 +0.5 1.9 nucleoid-associated protein YejK compare
BWI76_RS21685 +0.5 1.0 hypothetical protein compare
BWI76_RS22190 +0.5 2.7 hypothetical protein compare
BWI76_RS09895 +0.5 2.0 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS07985 +0.5 0.7 fluoride ion transporter CrcB compare
BWI76_RS21740 +0.5 1.3 transcriptional regulator, LysR family protein compare
BWI76_RS05735 +0.5 2.6 transcriptional regulator compare
BWI76_RS24470 +0.5 3.1 hypothetical protein compare
BWI76_RS13960 +0.5 1.1 urea ABC transporter periplasmic protein compare
BWI76_RS15925 +0.5 1.7 dimethyl sulfoxide reductase subunit A compare
BWI76_RS03015 +0.5 1.6 RNase E inhibitor protein compare
BWI76_RS08630 +0.5 2.6 molybdate ABC transporter ATP-binding protein ModF compare
BWI76_RS20230 +0.5 0.6 hypothetical protein compare
BWI76_RS24810 +0.5 1.3 hypothetical protein compare
BWI76_RS24270 +0.5 1.5 membrane protein compare
BWI76_RS13805 +0.5 1.8 inorganic diphosphatase compare
BWI76_RS16665 +0.5 2.2 ABC transporter permease compare
BWI76_RS07260 +0.5 1.6 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS23245 +0.5 2.3 hypothetical protein compare
BWI76_RS11935 +0.5 1.8 YmiA family putative membrane protein compare
BWI76_RS14810 +0.5 2.1 carboxymuconolactone decarboxylase compare
BWI76_RS04895 +0.5 1.3 hypothetical protein compare
BWI76_RS24920 +0.5 1.4 YraN family protein compare
BWI76_RS14095 +0.5 2.8 hypothetical protein compare
BWI76_RS24630 +0.5 2.2 putrescine aminotransferase compare
BWI76_RS14575 +0.5 1.6 TENA/THI-4 family protein compare
BWI76_RS12670 +0.5 1.3 DNA polymerase V subunit UmuD compare
BWI76_RS13065 +0.5 2.5 LysR family transcriptional regulator compare
BWI76_RS18410 +0.5 1.3 drug/metabolite exporter YedA compare
BWI76_RS16270 +0.5 2.2 fumarate hydratase, class II compare
BWI76_RS06130 +0.5 1.6 extensin family protein compare
BWI76_RS19140 +0.5 2.1 citrate (Si)-synthase compare
BWI76_RS10540 +0.5 2.4 allantoinase compare
BWI76_RS15215 +0.5 0.6 N-acetyltransferase compare
BWI76_RS26870 +0.5 1.6 dipeptide ABC transporter ATP-binding protein compare
BWI76_RS25035 +0.5 1.5 malonate transporter subunit MadM compare
BWI76_RS09155 +0.5 1.9 undecaprenyl-diphosphatase compare
BWI76_RS21130 +0.5 1.0 Fe-S assembly protein IscX compare
BWI76_RS10255 +0.5 1.2 dihydrodipicolinate synthase family protein compare
BWI76_RS16645 +0.5 1.1 DeoR family transcriptional regulator compare
BWI76_RS04060 +0.5 1.1 hypothetical protein compare
BWI76_RS26285 +0.5 2.0 glycerophosphodiester phosphodiesterase compare
BWI76_RS19585 +0.5 0.8 gentisate 1,2-dioxygenase compare
BWI76_RS11010 +0.5 1.8 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS26020 +0.5 2.4 peptidylprolyl isomerase A compare
BWI76_RS25195 +0.5 1.9 maltose metabolism regulator compare
BWI76_RS15235 +0.5 1.3 hypothetical protein compare
BWI76_RS09690 +0.5 0.6 dimethyl sulfoxide reductase compare
BWI76_RS08600 +0.5 1.6 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS02440 +0.5 1.1 fumarate reductase subunit D compare
BWI76_RS16915 +0.5 1.4 alpha/beta hydrolase fold protein compare
BWI76_RS01700 +0.5 2.0 dipeptidase E compare
BWI76_RS10755 +0.5 0.9 pyrimidine utilization flavin reductase protein F compare
BWI76_RS16790 +0.5 2.5 MFS transporter compare
BWI76_RS24485 +0.5 1.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS07255 +0.5 1.0 hypothetical protein compare
BWI76_RS11865 +0.5 2.3 phosphatase compare
BWI76_RS14510 +0.4 1.4 MFS transporter compare
BWI76_RS19515 +0.4 1.6 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS21170 +0.4 2.0 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ compare
BWI76_RS26300 +0.4 1.3 glycerol-3-phosphate transporter permease compare
BWI76_RS19530 +0.4 1.9 YIP1 family protein compare
BWI76_RS21675 +0.4 0.9 hypothetical protein compare
BWI76_RS13790 +0.4 1.7 peptide ABC transporter permease compare
BWI76_RS17380 +0.4 2.1 nitrate transporter component compare
BWI76_RS06530 +0.4 1.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS24350 +0.4 1.6 quinol monooxygenase compare
BWI76_RS14390 +0.4 0.7 hypothetical protein compare
BWI76_RS03295 +0.4 1.0 transposase compare
BWI76_RS21915 +0.4 3.0 short-chain dehydrogenase/reductase SDR compare
BWI76_RS06165 +0.4 2.2 phosphate starvation-inducible protein PsiF compare
BWI76_RS17500 +0.4 1.8 knotted carbamoyltransferase YgeW compare
BWI76_RS00790 +0.4 2.4 bifunctional aspartokinase II/homoserine dehydrogenase II compare
BWI76_RS13480 +0.4 1.1 XRE family transcriptional regulator compare
BWI76_RS16400 +0.4 1.4 pyridoxal kinase compare
BWI76_RS02800 +0.4 1.6 ABC transporter compare
BWI76_RS05985 +0.4 1.7 branched-chain amino acid ABC transporter permease compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source Cytidine in Klebsiella michiganensis M5al

For carbon source Cytidine across organisms