Experiment set5IT022 for Dechlorosoma suillum PS

Compare to:

ALP with Sodium nitrate 75 mM

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -6.4 -14.9 phosphotransferase system HPr (HPr) family protein compare
Dsui_0742 -5.7 -18.1 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -5.6 -9.3 putative permease compare
Dsui_3392 -5.2 -11.5 carboxylate-amine ligase, YbdK family compare
Dsui_3393 -4.9 -8.4 Kef-type K+ transport system, membrane component compare
Dsui_2816 -4.8 -6.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1970 -4.8 -8.6 metalloendopeptidase-like membrane protein compare
Dsui_3524 -4.4 -12.5 signal transduction histidine kinase compare
Dsui_0520 -4.2 -18.1 transcriptional regulator compare
Dsui_3523 -4.2 -8.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3139 -4.2 -4.9 outer membrane assembly lipoprotein YfgL compare
Dsui_1529 -4.1 -7.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2717 -4.0 -8.2 RNA polymerase-binding protein DksA compare
Dsui_3054 -3.9 -3.3 phosphate ABC transporter, permease protein PstA compare
Dsui_1978 -3.8 -3.4 putative lipoprotein compare
Dsui_1061 -3.7 -14.6 membrane-bound lytic murein transglycosylase compare
Dsui_2651 -3.7 -1.9 ankyrin repeat-containing protein compare
Dsui_0007 -3.6 -2.9 cold shock protein compare
Dsui_2295 -3.6 -1.1 transcriptional regulator compare
Dsui_1553 -3.4 -1.8 regulator of competence-specific genes compare
Dsui_2797 -3.2 -24.0 LysM repeat-containing protein compare
Dsui_1398 -3.2 -9.6 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_3158 -3.1 -4.2 Na+/H+ dicarboxylate symporter compare
Dsui_1855 -3.1 -1.8 hypothetical protein compare
Dsui_1321 -3.0 -8.8 ABC-type uncharacterized transport system, permease component compare
Dsui_1399 -3.0 -11.5 conserved hypothetical integral membrane protein compare
Dsui_0870 -2.9 -12.0 putative membrane protein compare
Dsui_1000 -2.9 -1.9 hypothetical protein compare
Dsui_0968 -2.9 -1.7 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_1599 -2.9 -15.8 putative enzyme of heme biosynthesis compare
Dsui_0487 -2.8 -1.7 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1401 -2.8 -6.4 surface lipoprotein compare
Dsui_1402 -2.8 -5.5 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1400 -2.8 -13.4 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_3272 -2.7 -1.9 putative threonine efflux protein compare
Dsui_2667 -2.7 -1.6 acetyltransferase compare
Dsui_3457 -2.7 -3.0 K+ transporter compare
Dsui_2342 -2.7 -1.8 multidrug resistance efflux pump compare
Dsui_0778 -2.6 -3.3 small protein A (tmRNA-binding) compare
Dsui_3171 -2.6 -1.6 putative protein-disulfide isomerase compare
Dsui_3007 -2.6 -0.8 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1620 -2.6 -1.6 PAP2 (acid phosphatase) superfamily protein compare
Dsui_1947 -2.6 -2.5 nucleotide sugar dehydrogenase compare
Dsui_3531 -2.6 -4.3 Protein of unknown function (DUF3619) compare
Dsui_2033 -2.6 -1.7 transcriptional regulator compare
Dsui_3527 -2.6 -0.7 ketol-acid reductoisomerase compare
Dsui_0477 -2.5 -4.1 tol-pal system protein YbgF compare
Dsui_1851 -2.5 -1.7 signal transduction histidine kinase compare
Dsui_1165 -2.5 -1.7 Ni,Fe-hydrogenase I large subunit compare
Dsui_2424 -2.5 -0.7 hypothetical protein compare
Dsui_3298 -2.5 -17.1 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1659 -2.5 -1.7 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2443 -2.4 -2.8 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_2032 -2.4 -1.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1610 -2.4 -1.6 Protein of unknown function (DUF3079) compare
Dsui_3270 -2.4 -2.2 2'-5' RNA ligase compare
Dsui_1198 -2.4 -7.2 apolipoprotein N-acyltransferase compare
Dsui_3069 -2.4 -5.2 putative membrane protein compare
Dsui_0200 -2.4 -1.4 hypothetical protein compare
Dsui_2740 -2.4 -1.6 putative integral membrane protein compare
Dsui_0620 -2.4 -2.8 Fe2+-dicitrate sensor, membrane component compare
Dsui_0515 -2.4 -1.2 hypothetical protein compare
Dsui_0865 -2.3 -2.2 hypothetical protein compare
Dsui_1600 -2.3 -16.2 putative enzyme of heme biosynthesis compare
Dsui_3520 -2.3 -19.5 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1242 -2.3 -1.6 hypothetical protein compare
Dsui_1819 -2.3 -1.0 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1403 -2.3 -2.5 putative NTP binding protein (contains STAS domain) compare
Dsui_1839 -2.3 -1.3 hypothetical protein compare
Dsui_2895 -2.3 -1.5 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1674 -2.3 -1.5 EAL domain-containing protein compare
Dsui_0558 -2.3 -1.5 tetratricopeptide repeat protein compare
Dsui_2123 -2.3 -1.2 EAL domain-containing protein compare
Dsui_0431 -2.3 -2.6 putative permease, DMT superfamily compare
Dsui_3352 -2.2 -1.5 cAMP-binding protein compare
Dsui_2969 -2.2 -2.1 uroporphyrin-III C-methyltransferase compare
Dsui_2687 -2.2 -8.3 RIP metalloprotease RseP compare
Dsui_0838 -2.2 -2.6 hypothetical protein compare
Dsui_0553 -2.2 -1.3 putative nitrogen fixation protein compare
Dsui_1607 -2.2 -1.8 putative membrane-associated protein compare
Dsui_2775 -2.2 -2.5 hypothetical protein compare
Dsui_0174 -2.2 -1.3 hypothetical protein compare
Dsui_1817 -2.2 -1.5 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_1370 -2.2 -1.5 putative permease, DMT superfamily compare
Dsui_0209 -2.2 -1.5 hypothetical protein compare
Dsui_3278 -2.2 -2.9 molybdenum cofactor biosynthesis protein A compare
Dsui_0033 -2.2 -2.2 Zn-dependent protease with chaperone function compare
Dsui_2966 -2.1 -1.8 cobalamin biosynthesis protein CbiG compare
Dsui_1140 -2.1 -1.5 arabinose efflux permease family protein compare
Dsui_3478 -2.1 -0.9 hypothetical protein compare
Dsui_0003 -2.1 -4.3 putative Zn-dependent protease compare
Dsui_2927 -2.1 -4.5 cell wall-associated hydrolase, invasion-associated protein compare
Dsui_3484 -2.1 -2.2 putative permease compare
Dsui_0252 -2.1 -1.0 TIGR00252 family protein compare
Dsui_0255 -2.1 -2.7 hypothetical protein compare
Dsui_2329 -2.1 -1.4 putative dehydrogenase compare
Dsui_1396 -2.1 -1.4 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_3521 -2.1 -11.9 membrane-fusion protein compare
Dsui_3377 -2.1 -1.4 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_3231 -2.1 -1.4 hypothetical protein compare
Dsui_0533 -2.1 -1.9 cobyrinic acid a,c-diamide synthase compare
Dsui_0878 -2.1 -1.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_2272 -2.1 -1.4 hypothetical protein compare
Dsui_1818 -2.1 -4.8 anthranilate phosphoribosyltransferase compare
Dsui_0412 -2.1 -1.4 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2330 -2.1 -1.4 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_0734 -2.1 -1.0 acetyltransferase compare
Dsui_3118 -2.1 -1.4 polyferredoxin compare
Dsui_1852 -2.1 -1.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0598 -2.1 -2.5 hypothetical protein compare
Dsui_3240 -2.1 -10.5 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3366 -2.0 -1.4 glycerophosphoryl diester phosphodiesterase compare
Dsui_0899 -2.0 -16.6 D-alanyl-D-alanine carboxypeptidase compare
Dsui_1149 -2.0 -1.4 Zn-dependent protease with chaperone function compare
Dsui_0945 -2.0 -1.0 Iron-sulfur cluster assembly accessory protein compare
Dsui_1669 -2.0 -1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0105 -2.0 -2.0 NAD-dependent aldehyde dehydrogenase compare
Dsui_2290 -2.0 -1.4 putative paraquat-inducible protein A compare
Dsui_3026 -2.0 -1.0 hydrogenase maturation protease compare
Dsui_0393 -2.0 -1.3 glycosyltransferase compare
Dsui_1045 -2.0 -1.3 hypothetical protein compare
Dsui_0764 -2.0 -1.3 nitrogen regulatory protein PII compare
Dsui_0871 -2.0 -0.6 hypothetical protein compare
Dsui_3006 -2.0 -0.8 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_0557 -2.0 -1.3 NifQ compare
Dsui_2893 -2.0 -2.6 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3318 -2.0 -1.9 cytochrome c, mono- and diheme variants family compare
Dsui_3178 -1.9 -1.3 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1360 -1.9 -1.8 hypothetical protein compare
Dsui_1615 -1.9 -1.0 hypothetical protein compare
Dsui_1453 -1.9 -4.2 metal-dependent hydrolase, beta-lactamase superfamily III compare
Dsui_0966 -1.9 -3.3 methyl-accepting chemotaxis protein compare
Dsui_2488 -1.9 -2.5 Protein of unknown function (DUF3293) compare
Dsui_1879 -1.9 -1.3 luciferase family oxidoreductase, group 1 compare
Dsui_1618 -1.9 -1.8 signal transduction histidine kinase compare
Dsui_1734 -1.9 -1.3 flagellar hook capping protein compare
Dsui_1619 -1.9 -1.3 putative membrane-associated, metal-dependent hydrolase compare
Dsui_2772 -1.9 -1.1 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_2935 -1.9 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2921 -1.9 -2.3 isochorismate synthase family protein compare
Dsui_2518 -1.9 -1.8 hypothetical protein compare
Dsui_2389 -1.9 -2.2 putative membrane protein compare
Dsui_1833 -1.9 -1.3 nitrate transport ATP-binding subunits C and D compare
Dsui_2238 -1.9 -2.4 ABC-type dipeptide transport system, periplasmic component compare
Dsui_0756 -1.9 -7.2 hypothetical protein compare
Dsui_3271 -1.9 -1.3 ATP-dependent protease Clp, ATPase subunit compare
Dsui_0940 -1.9 -1.3 Nif-specific regulatory protein compare
Dsui_2341 -1.9 -1.3 ABC-type multidrug transport system, ATPase component compare
Dsui_2164 -1.9 -2.7 signal transduction histidine kinase compare
Dsui_3330 -1.9 -0.9 hypothetical protein compare
Dsui_3351 -1.9 -1.3 cytochrome c peroxidase compare
Dsui_3125 -1.9 -1.3 cytochrome c, mono- and diheme variants family compare
Dsui_1105 -1.9 -2.2 methylmalonyl-CoA mutase family protein compare
Dsui_1931 -1.9 -1.7 transcriptional regulator compare
Dsui_2085 -1.9 -1.3 NADPH-dependent FMN reductase compare
Dsui_0654 -1.9 -1.3 hypothetical protein compare
Dsui_0513 -1.8 -3.4 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0418 -1.8 -1.8 putative Na+-dependent transporter compare
Dsui_0763 -1.8 -2.2 ammonium transporter compare
Dsui_1974 -1.8 -1.3 hypothetical protein compare
Dsui_3426 -1.8 -1.7 transcriptional regulator compare
Dsui_0573 -1.8 -0.8 ferredoxin-like protein compare
Dsui_1759 -1.8 -4.7 flagellar hook-basal body complex protein FliE compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_1926 -1.8 -2.5 acetolactate synthase, small (regulatory) subunit compare
Dsui_1353 -1.8 -1.2 flagellar capping protein compare
Dsui_0128 -1.8 -15.1 D-alanyl-D-alanine carboxypeptidase compare
Dsui_1676 -1.8 -1.2 biopolymer transport protein compare
Dsui_1015 -1.8 -4.5 hypothetical protein compare
Dsui_1992 -1.8 -3.2 ribosomal protein L9 compare
Dsui_3109 -1.8 -1.2 cytochrome c, mono- and diheme variants family compare
Dsui_1888 -1.8 -1.1 putative domain HDIG-containing protein compare
Dsui_0107 -1.8 -1.2 PDZ domain-containing protein compare
Dsui_1111 -1.8 -1.2 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_0881 -1.8 -1.2 cAMP-binding protein compare
Dsui_2094 -1.8 -1.2 putative autotransporter protein compare
Dsui_0618 -1.8 -1.2 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_0015 -1.8 -1.1 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_3150 -1.8 -1.2 electron transfer flavoprotein, beta subunit compare
Dsui_0955 -1.8 -1.2 nitrogenase iron protein compare
Dsui_3274 -1.8 -2.4 dihydrodipicolinate reductase compare
Dsui_2610 -1.8 -1.2 single-stranded DNA-binding protein compare
Dsui_3105 -1.8 -10.6 CBS domain-containing protein compare
Dsui_1446 -1.8 -5.4 succinyl-CoA synthetase, alpha subunit compare
Dsui_2866 -1.8 -1.2 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_2949 -1.8 -2.5 Fe2+-dicitrate sensor, membrane component compare
Dsui_2941 -1.8 -1.2 hypothetical protein compare
Dsui_2669 -1.8 -3.0 ankyrin repeat-containing protein compare
Dsui_0653 -1.8 -2.3 putative SAM-dependent methyltransferase compare
Dsui_0567 -1.7 -0.7 molybdenum-pterin binding domain protein compare
Dsui_1349 -1.7 -1.2 hypothetical protein compare
Dsui_1739 -1.7 -2.0 flagellar basal-body P-ring protein compare
Dsui_0692 -1.7 -3.0 hypothetical protein compare
Dsui_3408 -1.7 -2.0 hypothetical protein compare
Dsui_1864 -1.7 -1.6 hypothetical protein compare
Dsui_1537 -1.7 -1.2 DNA repair protein radc compare
Dsui_1133 -1.7 -1.1 hypothetical protein compare
Dsui_0708 -1.7 -4.4 PAS domain S-box compare
Dsui_3156 -1.7 -1.2 putative permease compare
Dsui_0969 -1.7 -2.3 putative AP superfamily protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium nitrate in Dechlorosoma suillum PS

For stress Sodium nitrate across organisms