Experiment set5IT021 for Pseudomonas fluorescens SBW25-INTG

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS28645 -5.8 -4.0 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS03645 -5.6 -5.4 tetratricopeptide repeat protein compare
PFLU_RS01645 -5.5 -3.8 S41 family peptidase compare
PFLU_RS29095 -5.5 -19.4 polyphosphate kinase 1 compare
PFLU_RS23920 -5.3 -3.1 septation protein A compare
PFLU_RS04385 -5.0 -3.5 RNase adapter RapZ compare
PFLU_RS27620 -4.9 -13.4 acyl-CoA dehydrogenase compare
PFLU_RS03970 -4.8 -3.3 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS14550 -4.8 -3.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS04715 -4.8 -5.7 D-alanine--D-alanine ligase compare
PFLU_RS01605 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS29880 -4.7 -4.6 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS07650 -4.7 -9.0 fatty acid oxidation complex subunit alpha FadB compare
PFLU_RS20580 -4.7 -4.6 3-isopropylmalate dehydratase large subunit compare
PFLU_RS29885 -4.7 -7.1 LysR family transcriptional regulator compare
PFLU_RS29875 -4.6 -4.5 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS24650 -4.6 -7.0 SIS domain-containing protein conserved
PFLU_RS20575 -4.6 -3.1 3-isopropylmalate dehydratase small subunit compare
PFLU_RS26735 -4.5 -5.4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS27365 -4.5 -6.2 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS06320 -4.5 -3.1 OmpH family outer membrane protein compare
PFLU_RS28695 -4.5 -4.4 phosphoglycerate dehydrogenase compare
PFLU_RS28535 -4.5 -5.3 dihydroxy-acid dehydratase compare
PFLU_RS24655 -4.4 -6.8 phosphoenolpyruvate--protein phosphotransferase conserved
PFLU_RS02370 -4.4 -9.0 glycosyltransferase compare
PFLU_RS28650 -4.4 -3.0 RNA pyrophosphohydrolase compare
PFLU_RS10325 -4.4 -3.0 MFS transporter compare
PFLU_RS23680 -4.4 -20.3 long-chain fatty acid--CoA ligase compare
PFLU_RS02490 -4.3 -7.8 phosphoserine phosphatase SerB compare
PFLU_RS07695 -4.3 -3.0 beta-N-acetylhexosaminidase compare
PFLU_RS24645 -4.3 -7.8 N-acetylglucosamine-6-phosphate deacetylase conserved
PFLU_RS28390 -4.3 -7.8 methionine biosynthesis protein MetW compare
PFLU_RS27370 -4.3 -6.6 anthranilate phosphoribosyltransferase compare
PFLU_RS22095 -4.3 -13.3 GTP diphosphokinase compare
PFLU_RS20540 -4.3 -5.1 phosphoribosylanthranilate isomerase compare
PFLU_RS24765 -4.2 -13.0 2-isopropylmalate synthase compare
PFLU_RS24660 -4.2 -10.8 PTS transporter subunit IIBC conserved
PFLU_RS25760 -4.2 -4.9 glucose-6-phosphate isomerase compare
PFLU_RS28385 -4.1 -9.6 homoserine O-acetyltransferase compare
PFLU_RS20565 -4.1 -7.4 3-isopropylmalate dehydrogenase compare
PFLU_RS25360 -4.1 -2.8 glutamate 5-kinase compare
PFLU_RS20625 -4.1 -3.2 TetR/AcrR family transcriptional regulator compare
PFLU_RS02365 -4.1 -14.4 glycosyltransferase compare
PFLU_RS27440 -4.1 -4.0 nucleotidyltransferase family protein compare
PFLU_RS26545 -4.1 -13.0 sel1 repeat family protein compare
PFLU_RS01620 -4.0 -4.8 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS25640 -4.0 -5.5 ketol-acid reductoisomerase compare
PFLU_RS00180 -4.0 -2.8 tryptophan synthase subunit beta compare
PFLU_RS28965 -4.0 -6.1 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS01895 -4.0 -5.4 phosphoribosyl-ATP diphosphatase compare
PFLU_RS22835 -3.9 -6.0 amidotransferase compare
PFLU_RS04660 -3.9 -4.6 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS04470 -3.9 -6.5 histidinol dehydrogenase compare
PFLU_RS02590 -3.9 -5.4 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS01900 -3.9 -3.8 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS20510 -3.9 -8.7 O-succinylhomoserine sulfhydrylase compare
PFLU_RS15065 -3.8 -2.6 IclR family transcriptional regulator compare
PFLU_RS22630 -3.8 -16.3 phosphoenolpyruvate synthase compare
PFLU_RS11525 -3.8 -3.7 GntR family transcriptional regulator compare
PFLU_RS04465 -3.8 -8.8 ATP phosphoribosyltransferase compare
PFLU_RS26770 -3.7 -13.4 DedA family protein compare
PFLU_RS24785 -3.7 -9.6 outer membrane protein assembly factor BamB compare
PFLU_RS03980 -3.7 -6.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
PFLU_RS08505 -3.7 -3.6 protease HtpX compare
PFLU_RS12980 -3.7 -5.6 nitrite/sulfite reductase compare
PFLU_RS12975 -3.7 -4.3 DUF934 domain-containing protein compare
PFLU_RS25225 -3.6 -11.2 disulfide bond formation protein B compare
PFLU_RS09980 -3.6 -18.8 peptidase S41 compare
PFLU_RS24125 -3.6 -2.5 cold-shock protein compare
PFLU_RS28165 -3.6 -7.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS18505 -3.6 -3.5 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS21300 -3.6 -6.8 cysteine hydrolase compare
PFLU_RS25750 -3.6 -4.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS01320 -3.6 -3.5 phosphoenolpyruvate carboxykinase compare
PFLU_RS00520 -3.5 -4.1 DUF2388 domain-containing protein compare
PFLU_RS28655 -3.5 -10.4 HAD family hydrolase compare
PFLU_RS00175 -3.5 -4.8 tryptophan synthase subunit alpha compare
PFLU_RS05210 -3.5 -2.3 HU family DNA-binding protein compare
PFLU_RS08065 -3.5 -8.7 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS03770 -3.5 -12.9 sulfate adenylyltransferase subunit CysN compare
PFLU_RS21965 -3.5 -13.7 transporter compare
PFLU_RS22105 -3.4 -3.3 cysteine synthase CysM compare
PFLU_RS00310 -3.4 -1.3 twin transmembrane helix small protein compare
PFLU_RS24485 -3.4 -10.4 hypothetical protein compare
PFLU_RS25715 -3.4 -4.7 RNA polymerase-binding protein DksA compare
PFLU_RS04220 -3.4 -6.1 FadR family transcriptional regulator compare
PFLU_RS23725 -3.3 -10.2 glucose-6-phosphate dehydrogenase compare
PFLU_RS13485 -3.3 -14.8 1,4-alpha-glucan branching protein GlgB compare
PFLU_RS24025 -3.3 -9.8 quinolinate synthase NadA compare
PFLU_RS25815 -3.3 -1.7 transcription termination/antitermination protein NusA compare
PFLU_RS03765 -3.3 -10.3 sulfate adenylyltransferase subunit CysD compare
PFLU_RS25735 -3.3 -2.3 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS22740 -3.3 -3.2 phosphoadenylyl-sulfate reductase compare
PFLU_RS24640 -3.2 -9.0 GntR family transcriptional regulator conserved
PFLU_RS12580 -3.2 -7.7 MurR/RpiR family transcriptional regulator compare
PFLU_RS18940 -3.2 -7.7 acyl-CoA dehydrogenase compare
PFLU_RS21570 -3.2 -3.0 exonuclease compare
PFLU_RS24790 -3.2 -4.3 tetratricopeptide repeat protein compare
PFLU_RS23070 -3.1 -1.2 50S ribosomal protein L32 compare
PFLU_RS22070 -3.1 -5.2 phosphoribosylglycinamide formyltransferase compare
PFLU_RS26020 -3.1 -11.5 TetR/AcrR family transcriptional regulator compare
PFLU_RS23305 -3.1 -9.5 arginine N-succinyltransferase compare
PFLU_RS31805 -3.1 -2.2 hypothetical protein compare
PFLU_RS24335 -3.1 -12.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
PFLU_RS22595 -3.1 -2.1 OmpA family protein compare
PFLU_RS05340 -3.1 -2.5 SDR family NAD(P)-dependent oxidoreductase compare
PFLU_RS23310 -3.1 -7.1 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS25755 -3.1 -2.1 pantoate--beta-alanine ligase compare
PFLU_RS01625 -3.0 -2.1 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS19175 -3.0 -8.4 trigger factor compare
PFLU_RS07655 -3.0 -5.0 acetyl-CoA C-acyltransferase FadA compare
PFLU_RS27650 -3.0 -14.6 biotin synthase BioB compare
PFLU_RS28270 -3.0 -2.3 triphosphoribosyl-dephospho-CoA synthase compare
PFLU_RS25730 -3.0 -16.0 PAS domain S-box protein compare
PFLU_RS27685 -2.9 -14.9 malate synthase G compare
PFLU_RS13750 -2.9 -1.5 hypothetical protein compare
PFLU_RS19160 -2.9 -10.1 endopeptidase La compare
PFLU_RS28725 -2.8 -11.3 DUF2059 domain-containing protein compare
PFLU_RS26905 -2.8 -10.3 transcriptional regulator NrdR compare
PFLU_RS29735 -2.8 -10.9 HlyC/CorC family transporter compare
PFLU_RS04070 -2.8 -4.6 peptide chain release factor 3 compare
PFLU_RS01610 -2.8 -11.6 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS20690 -2.8 -4.4 hypothetical protein compare
PFLU_RS19165 -2.7 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS26640 -2.7 -9.2 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS15410 -2.7 -1.9 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS18610 -2.7 -13.9 isocitrate lyase compare
PFLU_RS13365 -2.7 -1.4 hypothetical protein compare
PFLU_RS31490 -2.7 -1.0 hypothetical protein compare
PFLU_RS16935 -2.7 -3.6 CoA ester lyase compare
PFLU_RS29215 -2.7 -11.4 response regulator transcription factor compare
PFLU_RS21060 -2.7 -3.6 TetR/AcrR family transcriptional regulator compare
PFLU_RS08155 -2.7 -1.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
PFLU_RS04430 -2.6 -6.3 ATP-binding cassette domain-containing protein compare
PFLU_RS09055 -2.6 -1.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS31100 -2.6 -4.0 preprotein translocase subunit SecG compare
PFLU_RS27445 -2.6 -11.5 phosphotransferase compare
PFLU_RS04930 -2.6 -12.0 PhoH family protein compare
PFLU_RS31310 -2.6 -1.9 phage tail protein compare
PFLU_RS02980 -2.6 -2.1 precorrin-8X methylmutase compare
PFLU_RS13300 -2.6 -3.7 DNA-directed RNA polymerase sigma-70 factor compare
PFLU_RS28315 -2.5 -1.0 response regulator compare
PFLU_RS07640 -2.5 -9.1 universal stress protein compare
PFLU_RS25670 -2.5 -13.6 bifunctional aminoglycoside phosphotransferase/ATP-binding protein compare
PFLU_RS11620 -2.5 -11.0 FadR family transcriptional regulator compare
PFLU_RS23390 -2.5 -2.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
PFLU_RS28690 -2.5 -12.6 FAD-binding oxidoreductase compare
PFLU_RS29785 -2.5 -14.5 D-hexose-6-phosphate mutarotase conserved
PFLU_RS04435 -2.5 -6.0 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS04445 -2.5 -6.3 ABC transporter substrate-binding protein compare
PFLU_RS29555 -2.5 -10.9 HDOD domain-containing protein compare
PFLU_RS04440 -2.5 -8.2 outer membrane lipid asymmetry maintenance protein MlaD compare
PFLU_RS18910 -2.4 -4.5 MarR family transcriptional regulator compare
PFLU_RS15995 -2.4 -5.3 TetR/AcrR family transcriptional regulator compare
PFLU_RS18645 -2.4 -1.6 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS04325 -2.4 -14.1 ribonuclease G compare
PFLU_RS22195 -2.4 -3.9 DEAD/DEAH box helicase compare
PFLU_RS07785 -2.4 -9.5 VacJ family lipoprotein compare
PFLU_RS13475 -2.4 -12.9 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase compare
PFLU_RS28755 -2.3 -7.8 ABC transporter permease subunit compare
PFLU_RS09575 -2.3 -4.6 FadR family transcriptional regulator compare
PFLU_RS02455 -2.3 -2.2 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS25305 -2.3 -8.7 dihydromonapterin reductase compare
PFLU_RS18615 -2.3 -1.6 NADH-quinone oxidoreductase subunit A compare
PFLU_RS13715 -2.3 -1.7 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS02825 -2.3 -1.2 phosphate starvation-inducible protein PsiF compare
PFLU_RS24330 -2.3 -6.0 phosphogluconate dehydratase compare
PFLU_RS02970 -2.3 -7.3 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS30345 -2.3 -2.4 DUF2559 family protein compare
PFLU_RS25315 -2.3 -5.7 dihydroneopterin triphosphate 2'-epimerase compare
PFLU_RS01005 -2.3 -1.1 ABC transporter ATP-binding protein compare
PFLU_RS22895 -2.3 -14.5 PLP-dependent aminotransferase family protein compare
PFLU_RS04315 -2.3 -3.1 rod shape-determining protein MreD compare
PFLU_RS24000 -2.3 -13.5 aminomethyl-transferring glycine dehydrogenase compare
PFLU_RS21495 -2.3 -2.6 TlpA family protein disulfide reductase compare
PFLU_RS07805 -2.2 -13.9 transaldolase compare
PFLU_RS24095 -2.2 -1.5 crossover junction endodeoxyribonuclease RuvC compare
PFLU_RS06130 -2.2 -6.6 phosphoenolpyruvate carboxylase compare
PFLU_RS14810 -2.2 -2.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
PFLU_RS18625 -2.2 -2.6 NADH-quinone oxidoreductase subunit C/D compare
PFLU_RS23890 -2.2 -4.2 pseudouridine synthase compare
PFLU_RS17950 -2.2 -1.7 hypothetical protein compare
PFLU_RS07225 -2.2 -13.3 L-aspartate oxidase compare
PFLU_RS18550 -2.2 -6.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFLU_RS28340 -2.2 -2.6 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
PFLU_RS20515 -2.2 -2.1 amidophosphoribosyltransferase compare
PFLU_RS13035 -2.2 -2.7 cobalamin biosynthesis protein CobW compare
PFLU_RS23675 -2.2 -3.0 hypothetical protein compare
PFLU_RS01965 -2.2 -1.4 ATP-dependent protease subunit HslV compare
PFLU_RS13045 -2.2 -6.8 AAA domain-containing protein compare
PFLU_RS04650 -2.1 -10.9 ABC transporter substrate-binding protein compare
PFLU_RS20285 -2.1 -5.6 MerR family transcriptional regulator compare
PFLU_RS04150 -2.1 -5.1 DUF1043 family protein compare
PFLU_RS21665 -2.1 -5.8 MinD/ParA family protein compare
PFLU_RS06055 -2.1 -0.9 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS31530 -2.1 -0.8 transposase compare
PFLU_RS28785 -2.1 -8.9 glutamine synthetase compare
PFLU_RS15610 -2.1 -5.3 helix-turn-helix transcriptional regulator compare
PFLU_RS09305 -2.1 -11.9 hypothetical protein compare
PFLU_RS13540 -2.1 -2.8 3-phosphoshikimate 1-carboxyvinyltransferase compare


Specific Phenotypes

For 28 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Pseudomonas fluorescens SBW25-INTG

For carbon source N-Acetyl-D-Glucosamine across organisms