Experiment set5IT020 for Methanococcus maripaludis S2

Compare to:

Formate with Neomycin 12.5 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS03315 -1.8 -1.7 ferrous iron transport protein A compare
MMP_RS05920 -1.7 -1.1 50S ribosomal protein L37e compare
MMP_RS07735 -1.6 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07005 -1.5 -0.8 4Fe-4S binding protein compare
MMP_RS05355 -1.4 -1.2 hypothetical protein compare
MMP_RS06840 -1.2 -1.3 DNA-directed RNA polymerase subunit N compare
MMP_RS00515 -1.2 -1.1 DUF655 domain-containing protein compare
MMP_RS06355 -1.1 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05845 -0.9 -1.2 tRNA-intron lyase compare
MMP_RS04780 -0.9 -2.2 ribonuclease P compare
MMP_RS08300 -0.9 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS05875 -0.8 -2.7 hydroxyethylthiazole kinase compare
MMP_RS05515 -0.8 -4.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06720 -0.8 -4.3 response regulator transcription factor compare
MMP_RS06700 -0.8 -5.4 hypothetical protein compare
MMP_RS02010 -0.8 -3.6 PHP domain-containing protein compare
MMP_RS06715 -0.8 -5.7 cache domain-containing protein compare
MMP_RS06345 -0.7 -4.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS06270 -0.7 -2.6 TIGR00300 family protein compare
MMP_RS06175 -0.7 -3.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS02885 -0.7 -5.3 molybdopterin biosynthesis protein compare
MMP_RS07845 -0.7 -1.7 LL-diaminopimelate aminotransferase compare
MMP_RS00125 -0.6 -1.2 DUF2798 domain-containing protein compare
MMP_RS06485 -0.6 -0.8 zinc ribbon domain-containing protein compare
MMP_RS01220 -0.6 -2.9 hypothetical protein compare
MMP_RS01250 -0.6 -2.1 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS01700 -0.6 -0.7 dihydroxy-acid dehydratase compare
MMP_RS03385 -0.6 -0.7 cation diffusion facilitator family transporter compare
MMP_RS06525 -0.6 -1.0 YciI family protein compare
MMP_RS00675 -0.6 -0.8 nitroreductase family protein compare
MMP_RS01150 -0.6 -2.3 aldo/keto reductase compare
MMP_RS00060 -0.6 -0.7 3-dehydroquinate synthase II compare
MMP_RS08320 -0.6 -1.6 molybdopterin molybdotransferase MoeA compare
MMP_RS06350 -0.5 -2.7 HesA/MoeB/ThiF family protein compare
MMP_RS02195 -0.5 -1.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04890 -0.5 -0.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07765 -0.5 -3.6 sodium:alanine symporter family protein compare
MMP_RS05315 -0.5 -1.1 hypothetical protein compare
MMP_RS04875 -0.5 -1.9 energy-converting hydrogenase B subunit P compare
MMP_RS07795 -0.5 -3.2 site-2 protease family protein compare
MMP_RS01085 -0.5 -1.1 hypothetical protein compare
MMP_RS00915 -0.5 -2.1 DUF116 domain-containing protein compare
MMP_RS03245 -0.5 -2.3 DNA repair and recombination protein RadB compare
MMP_RS04145 -0.5 -1.0 hypothetical protein compare
MMP_RS06110 -0.5 -1.4 ATP-dependent protease LonB compare
MMP_RS05835 -0.5 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS05555 -0.5 -0.9 DUF4040 domain-containing protein compare
MMP_RS01570 -0.5 -0.9 hypothetical protein compare
MMP_RS00295 -0.5 -1.3 gamma carbonic anhydrase family protein compare
MMP_RS08750 -0.4 -1.3 hypothetical protein compare
MMP_RS08365 -0.4 -2.5 energy conserving hydrogenase EhbF compare
MMP_RS05505 -0.4 -2.9 class IV adenylate cyclase compare
MMP_RS01100 -0.4 -1.0 ABC transporter ATP-binding protein compare
MMP_RS02130 -0.4 -2.2 zinc metalloprotease HtpX compare
MMP_RS08555 -0.4 -1.9 hypothetical protein compare
MMP_RS06250 -0.4 -2.0 hypothetical protein compare
MMP_RS09020 -0.4 -0.5 hypothetical protein compare
MMP_RS04190 -0.4 -2.9 hypothetical protein compare
MMP_RS06340 -0.4 -2.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04325 -0.4 -2.0 MtaA/CmuA family methyltransferase compare
MMP_RS03225 -0.4 -2.2 acetolactate decarboxylase compare
MMP_RS00770 -0.4 -1.2 hypothetical protein compare
MMP_RS04255 -0.4 -2.5 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08820 -0.4 -1.9 hypothetical protein compare
MMP_RS09055 -0.4 -0.5 CAP domain-containing protein compare
MMP_RS00120 -0.4 -2.1 LysR family transcriptional regulator compare
MMP_RS01255 -0.4 -1.6 amino acid ABC transporter ATP-binding protein compare
MMP_RS00645 -0.4 -2.3 iron ABC transporter permease compare
MMP_RS01430 -0.4 -2.5 mechanosensitive ion channel family protein compare
MMP_RS02635 -0.4 -2.0 class I SAM-dependent methyltransferase compare
MMP_RS00950 -0.4 -2.4 site-2 protease family protein compare
MMP_RS02480 -0.4 -1.0 hypothetical protein compare
MMP_RS00090 -0.4 -1.9 CoA-binding protein compare
MMP_RS07970 -0.4 -1.2 hypothetical protein compare
MMP_RS08330 -0.4 -1.8 NADH-quinone oxidoreductase subunit H compare
MMP_RS01125 -0.4 -1.9 thioredoxin family protein compare
MMP_RS04870 -0.4 -1.4 TIGR02253 family HAD-type hydrolase compare
MMP_RS02935 -0.4 -1.0 A24 family peptidase compare
MMP_RS07570 -0.4 -1.9 nucleotidyltransferase family protein compare
MMP_RS07835 -0.4 -2.0 TldD/PmbA family protein compare
MMP_RS07630 -0.3 -0.5 ATP-binding cassette domain-containing protein compare
MMP_RS06905 -0.3 -0.6 hypothetical protein compare
MMP_RS01080 -0.3 -2.1 DUF2202 domain-containing protein compare
MMP_RS01830 -0.3 -0.5 tRNA-Val compare
MMP_RS00345 -0.3 -1.7 DUF2666 domain-containing protein compare
MMP_RS06680 -0.3 -1.7 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01320 -0.3 -1.1 hypothetical protein compare
MMP_RS04945 -0.3 -1.6 hypothetical protein compare
MMP_RS00650 -0.3 -1.7 ABC transporter ATP-binding protein compare
MMP_RS05965 -0.3 -1.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS00235 -0.3 -2.4 HDIG domain-containing protein compare
MMP_RS07815 -0.3 -0.6 DUF2120 domain-containing protein compare
MMP_RS08250 -0.3 -1.9 pyruvate kinase compare
MMP_RS05790 -0.3 -1.5 HDIG domain-containing protein compare
MMP_RS00080 -0.3 -1.3 RecB-family nuclease compare
MMP_RS06590 -0.3 -1.4 GNAT family N-acetyltransferase compare
MMP_RS08095 -0.3 -1.5 dethiobiotin synthase compare
MMP_RS04100 -0.3 -1.0 hypothetical protein compare
MMP_RS08990 -0.3 -1.7 hypothetical protein compare
MMP_RS06075 -0.3 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS03305 -0.3 -1.9 winged helix-turn-helix domain-containing protein compare
MMP_RS00630 -0.3 -1.7 ECF transporter S component compare
MMP_RS08275 -0.3 -2.2 hypothetical protein compare
MMP_RS00400 -0.3 -1.1 tributyrin esterase compare
MMP_RS00305 -0.3 -0.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS03220 -0.3 -0.9 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01495 -0.3 -1.8 TraB/GumN family protein compare
MMP_RS04335 -0.3 -2.1 GTP-binding protein compare
MMP_RS06385 -0.3 -1.2 hypothetical protein compare
MMP_RS05865 -0.3 -1.3 hypothetical protein compare
MMP_RS01440 -0.3 -1.2 NAAT family transporter compare
MMP_RS08570 -0.3 -1.9 coenzyme F420-0:L-glutamate ligase compare
MMP_RS02680 -0.3 -1.5 ABC transporter permease compare
MMP_RS04205 -0.3 -1.2 carboxymuconolactone decarboxylase family protein compare
MMP_RS01190 -0.3 -1.7 cadmium-translocating P-type ATPase compare
MMP_RS02965 -0.3 -1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS00530 -0.3 -1.9 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS06495 -0.3 -1.3 YkgJ family cysteine cluster protein compare
MMP_RS08390 -0.3 -1.1 DUF5400 domain-containing protein compare
MMP_RS00905 -0.3 -1.3 phenylacetate--CoA ligase compare
MMP_RS04165 -0.3 -1.1 TetR/AcrR family transcriptional regulator compare
MMP_RS00570 -0.3 -0.9 protein-L-isoaspartate O-methyltransferase compare
MMP_RS01765 -0.3 -1.3 HIT family protein compare
MMP_RS03965 -0.3 -0.7 hypothetical protein compare
MMP_RS08610 -0.3 -1.7 flagellar protein F compare
MMP_RS02675 -0.3 -0.7 hypothetical protein compare
MMP_RS02495 -0.3 -0.8 hypothetical protein compare
MMP_RS07905 -0.3 -1.1 DUF3343 domain-containing protein compare
MMP_RS07085 -0.2 -1.4 ribonuclease HII compare
MMP_RS04285 -0.2 -1.5 Ni/Fe hydrogenase subunit alpha compare
MMP_RS03015 -0.2 -1.7 GTP 3' 8-cyclase MoaA compare
MMP_RS02955 -0.2 -1.1 DJ-1/PfpI family protein compare
MMP_RS02385 -0.2 -1.2 ATP-binding protein compare
MMP_RS04015 -0.2 -0.5 hypothetical protein compare
MMP_RS06370 -0.2 -1.4 biotin synthase BioB compare
MMP_RS08940 -0.2 -0.4 MetS family NSS transporter small subunit compare
MMP_RS05820 -0.2 -1.4 RNA-binding transcriptional accessory protein compare
MMP_RS04310 -0.2 -1.2 hypothetical protein compare
MMP_RS02975 -0.2 -1.1 DUF2124 domain-containing protein compare
MMP_RS00115 -0.2 -1.6 radical SAM protein compare
MMP_RS04045 -0.2 -1.5 hypothetical protein compare
MMP_RS07075 -0.2 -0.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS03830 -0.2 -1.5 exodeoxyribonuclease VII large subunit compare
MMP_RS04215 -0.2 -1.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS04350 -0.2 -1.5 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS06610 -0.2 -1.1 DUF2334 domain-containing protein compare
MMP_RS06055 -0.2 -1.0 peroxiredoxin compare
MMP_RS01580 -0.2 -1.6 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS06870 -0.2 -1.0 DedA family protein compare
MMP_RS06770 -0.2 -1.4 DHH family phosphoesterase compare
MMP_RS04035 -0.2 -0.7 hypothetical protein compare
MMP_RS02425 -0.2 -1.6 hypothetical protein compare
MMP_RS01375 -0.2 -1.8 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS04115 -0.2 -1.7 cytosine permease compare
MMP_RS04355 -0.2 -1.6 ribonuclease H family protein compare
MMP_RS09060 -0.2 -1.7 hypothetical protein compare
MMP_RS04475 -0.2 -0.6 nitrogen fixation compare
MMP_RS00135 -0.2 -1.1 DUF2121 domain-containing protein compare
MMP_RS01420 -0.2 -0.6 hypothetical protein compare
MMP_RS04210 -0.2 -1.6 aldo/keto reductase compare
MMP_RS04220 -0.2 -1.5 queuosine precursor transporter compare
MMP_RS08395 -0.2 -1.2 DsrE family protein compare
MMP_RS06760 -0.2 -1.0 hypothetical protein compare
MMP_RS07090 -0.2 -1.0 tRNA (adenine-N1)-methyltransferase compare
MMP_RS08240 -0.2 -1.2 methanogenesis marker 16 metalloprotein compare
MMP_RS02490 -0.2 -0.6 hypothetical protein compare
MMP_RS05485 -0.2 -1.4 cysteine--tRNA ligase compare
MMP_RS04260 -0.2 -1.1 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS06675 -0.2 -1.5 ADP-specific phosphofructokinase compare
MMP_RS00555 -0.2 -1.0 MFS transporter compare
MMP_RS04030 -0.2 -1.0 hypothetical protein compare
MMP_RS05490 -0.2 -0.8 IMPACT family protein compare
MMP_RS07195 -0.2 -1.2 M20 family metallo-hydrolase compare
MMP_RS05060 -0.2 -1.4 AAA family ATPase compare
MMP_RS05810 -0.2 -1.6 archaeosortase family protein ArtE compare
MMP_RS05550 -0.2 -0.2 cation:proton antiporter compare
MMP_RS08770 -0.2 -1.4 hypothetical protein compare
MMP_RS04185 -0.2 -1.5 aldo/keto reductase compare
MMP_RS06335 -0.2 -1.3 HAD family hydrolase compare
MMP_RS02390 -0.2 -1.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS02265 -0.2 -0.9 nitroreductase family protein compare
MMP_RS00965 -0.2 -0.6 hypothetical protein compare
MMP_RS08575 -0.2 -1.6 hypothetical protein compare
MMP_RS06735 -0.2 -1.0 class I SAM-dependent rRNA methyltransferase compare
MMP_RS05945 -0.2 -0.9 CBS domain-containing protein compare
MMP_RS02720 -0.2 -0.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS08480 -0.2 -1.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS03990 -0.2 -1.2 recombinase family protein compare
MMP_RS07885 -0.2 -0.8 tripartite tricarboxylate transporter permease compare
MMP_RS03780 -0.2 -0.9 4Fe-4S binding protein compare
MMP_RS00710 -0.2 -0.6 hypothetical protein compare
MMP_RS08685 -0.2 -1.4 hypothetical protein compare
MMP_RS00975 -0.2 -1.4 HD domain-containing protein compare
MMP_RS07575 -0.2 -0.6 RNA ligase partner protein compare
MMP_RS02470 -0.2 -0.3 helix-turn-helix transcriptional regulator compare
MMP_RS08760 -0.2 -0.5 hypothetical protein compare
MMP_RS05420 -0.2 -1.0 DUF61 family protein compare
MMP_RS06045 -0.2 -1.2 DNA polymerase compare
MMP_RS04270 -0.2 -1.2 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS06050 -0.2 -1.3 ZIP family metal transporter compare


Specific Phenotypes

For 1 genes in this experiment

For stress Neomycin trisulfate salt hydrate in Methanococcus maripaludis S2

For stress Neomycin trisulfate salt hydrate across organisms