Experiment set5IT019 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Phenylalanine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO353_07220 -4.7 -8.5 anthranilate synthase compare
AO353_12085 -4.5 -9.2 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_13165 -4.5 -6.1 ATP phosphoribosyltransferase regulatory subunit compare
AO353_12070 -4.3 -10.5 imidazoleglycerol-phosphate dehydratase compare
AO353_13070 -4.3 -10.3 phosphoserine phosphatase compare
AO353_00310 -4.2 -11.2 transaldolase compare
AO353_05115 -4.1 -12.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20625 -4.1 -4.9 3-isopropylmalate dehydratase compare
AO353_12365 -4.1 -5.6 phosphoribosyl-AMP cyclohydrolase compare
AO353_20665 -4.1 -12.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_20635 -4.0 -14.9 3-isopropylmalate dehydrogenase compare
AO353_07230 -3.9 -19.6 anthranilate synthase compare
AO353_12075 -3.8 -10.4 imidazole glycerol phosphate synthase subunit HisH compare
AO353_12500 -3.8 -2.6 shikimate kinase compare
AO353_14505 -3.8 -15.0 ketol-acid reductoisomerase compare
AO353_08685 -3.7 -8.3 N-acetylglutamate synthase compare
AO353_15560 -3.7 -6.1 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) conserved
AO353_22945 -3.6 -15.6 glycogen branching protein compare
AO353_20620 -3.5 -7.9 isopropylmalate isomerase compare
AO353_09240 -3.4 -2.3 acetylglutamate kinase compare
AO353_06495 -3.4 -7.8 gamma-glutamyl phosphate reductase compare
AO353_07215 -3.4 -9.9 anthranilate phosphoribosyltransferase compare
AO353_08345 -3.4 -11.5 dihydroxy-acid dehydratase compare
AO353_08510 -3.3 -7.4 3-phosphoglycerate dehydrogenase compare
AO353_14150 -3.3 -2.3 peptidylprolyl isomerase compare
AO353_05110 -3.2 -11.4 histidinol dehydrogenase compare
AO353_10710 -3.2 -6.4 tryptophan synthase subunit beta compare
AO353_14495 -3.2 -14.0 acetolactate synthase 3 catalytic subunit compare
AO353_02075 -3.1 -13.7 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_08475 -3.0 -11.0 phosphoserine phosphatase compare
AO353_04105 -3.0 -10.8 argininosuccinate synthase compare
AO353_08185 -3.0 -11.3 methionine biosynthesis protein MetW compare
AO353_05130 -2.9 -3.3 anti-anti-sigma factor compare
AO353_04155 -2.9 -13.2 ornithine carbamoyltransferase compare
AO353_07155 -2.9 -8.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_00825 -2.7 -5.3 porin compare
AO353_12145 -2.6 -6.5 nitrogen regulation protein NR(I) compare
AO353_06040 -2.5 -5.3 exodeoxyribonuclease V subunit alpha compare
AO353_17750 -2.5 -3.8 transcriptional regulator compare
AO353_14420 -2.5 -6.2 molecular chaperone DnaK compare
AO353_18590 -2.4 -10.0 AAA family ATPase conserved
AO353_18585 -2.3 -10.1 Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data) conserved
AO353_15555 -2.3 -5.8 fumarylacetoacetase compare
AO353_12090 -2.3 -2.6 imidazole glycerol phosphate synthase subunit HisF compare
AO353_09000 -2.3 -6.8 argininosuccinate lyase compare
AO353_12150 -2.3 -7.0 histidine kinase compare
AO353_08180 -2.2 -11.2 homoserine O-acetyltransferase compare
AO353_08165 -2.2 -4.2 pyrroline-5-carboxylate reductase compare
AO353_14500 -2.2 -7.1 acetolactate synthase 3 regulatory subunit compare
AO353_07210 -2.2 -3.9 indole-3-glycerol-phosphate synthase compare
AO353_13640 -2.2 -4.6 histidine kinase compare
AO353_16940 -2.2 -6.9 deoxycytidine triphosphate deaminase compare
AO353_08015 -2.2 -8.9 5,10-methylenetetrahydrofolate reductase compare
AO353_23495 -2.1 -2.4 SAM-dependent methyltransferase compare
AO353_22370 -2.1 -4.5 branched-chain amino acid ABC transporter substrate-binding protein compare
AO353_15925 -2.1 -8.6 2-isopropylmalate synthase compare
AO353_03360 -2.1 -8.0 glucose-6-phosphate dehydrogenase compare
AO353_02710 -2.1 -11.8 (p)ppGpp synthetase compare
AO353_12360 -2.0 -7.6 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_02250 -2.0 -3.1 chorismate synthase compare
AO353_07515 -2.0 -2.9 transporter compare
AO353_07525 -1.9 -11.2 biotin synthase compare
AO353_14115 -1.9 -7.1 gamma-glutamyl kinase compare
AO353_03590 -1.9 -4.4 crossover junction endodeoxyribonuclease RuvC compare
AO353_23730 -1.8 -3.0 hypothetical protein compare
AO353_06045 -1.8 -7.1 exodeoxyribonuclease V subunit beta compare
AO353_18540 -1.8 -3.5 pseudouridine synthase compare
AO353_26925 -1.8 -6.1 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) conserved
AO353_14400 -1.7 -4.8 Fis family transcriptional regulator compare
AO353_05105 -1.7 -8.4 histidinol-phosphate aminotransferase compare
AO353_27650 -1.7 -4.4 cell division protein FtsK compare
AO353_16450 -1.7 -9.6 protein-PII uridylyltransferase compare
AO353_08885 -1.6 -11.9 polyphosphate kinase compare
AO353_10025 -1.6 -10.0 pyruvate carboxylase subunit B compare
AO353_11850 -1.6 -5.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_10705 -1.6 -4.0 tryptophan synthase subunit alpha compare
AO353_07505 -1.6 -6.7 dethiobiotin synthetase compare
AO353_18575 -1.6 -3.8 tyrosine aminotransferase (EC 2.6.1.57) (from data) compare
AO353_06050 -1.6 -6.3 exodeoxyribonuclease V subunit gamma compare
AO353_10030 -1.6 -7.9 pyruvate carboxylase subunit A compare
AO353_04220 -1.6 -4.5 chemotaxis protein CheY compare
AO353_08115 -1.5 -5.0 energy transducer TonB compare
AO353_20695 -1.5 -3.6 O-succinylhomoserine sulfhydrylase compare
AO353_20175 -1.5 -3.0 ATP-dependent Clp protease proteolytic subunit compare
AO353_18780 -1.5 -6.5 cobyrinic acid a,c-diamide synthase compare
AO353_03580 -1.5 -2.5 ATP-dependent DNA helicase RuvB compare
AO353_24130 -1.5 -2.3 hypothetical protein compare
AO353_12520 -1.4 -7.8 glutamate synthase compare
AO353_00750 -1.4 -3.4 GntR family transcriptional regulator compare
AO353_21630 -1.4 -2.5 precorrin-4 C11-methyltransferase compare
AO353_10035 -1.4 -5.4 LysR family transcriptional regulator compare
AO353_09045 -1.4 -2.4 hypothetical protein compare
AO353_27335 -1.4 -2.8 hypothetical protein compare
AO353_03585 -1.4 -2.9 ATP-dependent DNA helicase RuvA compare
AO353_20510 -1.4 -1.6 amidase compare
AO353_17110 -1.4 -4.0 ABC transporter ATP-binding protein compare
AO353_17410 -1.4 -1.7 arylsulfate sulfotransferase compare
AO353_11165 -1.4 -6.5 hypothetical protein compare
AO353_17115 -1.3 -8.1 leucine/isoleucine/valine transporter permease subunit conserved
AO353_12390 -1.3 -2.6 poly(3-hydroxyalkanoate) granule-associated protein PhaI compare
AO353_14370 -1.3 -4.6 glucose-6-phosphate isomerase compare
AO353_26945 -1.3 -2.5 transcriptional regulator compare
AO353_11750 -1.3 -2.1 ATPase compare
AO353_15170 -1.3 -3.2 cytochrome D ubiquinol oxidase subunit III compare
AO353_19145 -1.2 -3.2 protease HtpX compare
AO353_07355 -1.2 -4.8 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_08130 -1.2 -1.7 uracil phosphoribosyltransferase compare
AO353_18715 -1.2 -1.2 histidine kinase compare
AO353_12515 -1.2 -9.8 glutamate synthase compare
AO353_01375 -1.2 -3.8 phosphate acyltransferase compare
AO353_01550 -1.2 -4.4 hypothetical protein compare
AO353_09745 -1.2 -1.2 hypothetical protein compare
AO353_10670 -1.2 -4.9 shikimate dehydrogenase compare
AO353_00115 -1.2 -2.9 hypothetical protein compare
AO353_16710 -1.2 -1.9 hypothetical protein compare
AO353_19295 -1.1 -2.1 hypothetical protein compare
AO353_07520 -1.1 -6.4 8-amino-7-oxononanoate synthase compare
AO353_08045 -1.1 -7.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_14740 -1.1 -2.8 GTP-binding protein compare
AO353_20170 -1.1 -4.0 trigger factor compare
AO353_11485 -1.1 -3.5 hypothetical protein compare
AO353_26045 -1.1 -2.0 hypothetical protein compare
AO353_10435 -1.1 -5.8 chromosome partitioning protein compare
AO353_01015 -1.1 -2.5 hypothetical protein compare
AO353_04355 -1.1 -1.8 homoserine dehydrogenase compare
AO353_22375 -1.0 -2.9 cytochrome c-550 PedF compare
AO353_08265 -1.0 -3.4 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_22415 -1.0 -3.2 alcohol dehydrogenase compare
AO353_08620 -1.0 -1.1 hypothetical protein compare
AO353_12115 -1.0 -1.5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_12105 -1.0 -4.7 peptidase S41 compare
AO353_16070 -1.0 -3.9 PadR family transcriptional regulator compare
AO353_01975 -1.0 -5.1 glycosyl transferase compare
AO353_17105 -1.0 -3.9 ABC transporter ATP-binding protein compare
AO353_17120 -1.0 -5.7 branched-chain amino acid transporter permease subunit LivH compare
AO353_04055 -1.0 -1.6 methionine--tRNA ligase compare
AO353_20800 -1.0 -1.3 hypothetical protein compare
AO353_06795 -1.0 -1.5 Isochorismatase compare
AO353_03100 -1.0 -1.8 XRE family transcriptional regulator compare
AO353_22800 -0.9 -2.5 sulfite reductase compare
AO353_03420 -0.9 -3.3 phosphogluconate dehydratase compare
AO353_08465 -0.9 -6.5 phosphoenolpyruvate-protein phosphotransferase compare
AO353_14385 -0.9 -2.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
AO353_14595 -0.9 -5.2 carbonate dehydratase compare
AO353_00760 -0.9 -1.4 hypothetical protein compare
AO353_17125 -0.9 -5.1 leucine ABC transporter substrate-binding protein compare
AO353_06405 -0.9 -3.0 hypothetical protein compare
AO353_00490 -0.9 -1.8 PasA protein compare
AO353_09040 -0.9 -1.0 diaminopimelate epimerase compare
AO353_27925 -0.9 -2.2 hypothetical protein compare
AO353_15185 -0.9 -2.5 ATPase compare
AO353_19205 -0.9 -2.2 hypothetical protein compare
AO353_14405 -0.9 -5.9 ATPase compare
AO353_15295 -0.9 -3.2 division/cell wall cluster transcriptional repressor MraZ compare
AO353_05535 -0.9 -2.6 tRNA-Thr compare
AO353_13345 -0.9 -5.9 branched-chain amino acid transporter permease subunit LivH compare
AO353_04365 -0.9 -3.2 recombinase XerD compare
AO353_08910 -0.9 -1.5 hypothetical protein compare
AO353_10430 -0.9 -2.3 chromosome partitioning protein ParB compare
AO353_02720 -0.9 -3.5 cysteine synthase compare
AO353_00620 -0.9 -1.0 cytochrome C oxidase Cbb3 compare
AO353_15830 -0.9 -1.8 transcriptional regulator compare
AO353_13360 -0.9 -3.8 ABC transporter ATP-binding protein compare
AO353_19605 -0.8 -1.7 hypothetical protein compare
AO353_03135 -0.8 -2.9 hypothetical protein compare
AO353_23905 -0.8 -2.7 GntR family transcriptional regulator compare
AO353_14945 -0.8 -2.6 hypothetical protein compare
AO353_25955 -0.8 -1.8 NIPSNAP family containing protein compare
AO353_19265 -0.8 -2.4 hypothetical protein compare
AO353_12345 -0.8 -1.3 twin-arginine protein translocation system subunit TatC compare
AO353_17855 -0.8 -2.3 ribonuclease D compare
AO353_12835 -0.8 -2.2 hypothetical protein compare
AO353_05690 -0.8 -1.6 SsrA-binding protein compare
AO353_11415 -0.8 -2.3 hypothetical protein compare
AO353_21640 -0.8 -1.5 cobalt transporter compare
AO353_10040 -0.8 -4.0 transcriptional regulator compare
AO353_13245 -0.8 -3.3 hypothetical protein compare
AO353_20095 -0.8 -3.3 histidine kinase compare
AO353_26645 -0.8 -2.3 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
AO353_15725 -0.8 -2.3 hypothetical protein compare
AO353_07510 -0.8 -4.1 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_13340 -0.8 -5.5 amino acid ABC transporter substrate-binding protein compare
AO353_07830 -0.8 -3.0 dimethylmenaquinone methyltransferase compare
AO353_28035 -0.8 -3.5 hypothetical protein compare
AO353_07315 -0.8 -1.4 rRNA methyltransferase compare
AO353_20545 -0.8 -5.7 excinuclease ABC subunit B compare
AO353_06540 -0.7 -1.3 hypothetical protein compare
AO353_16765 -0.7 -1.3 hypothetical protein compare
AO353_08155 -0.7 -4.0 twitching motility protein PilT compare
AO353_14220 -0.7 -0.8 ribosomal large subunit pseudouridine synthase D compare
AO353_10495 -0.7 -1.7 serine hydroxymethyltransferase compare
AO353_01795 -0.7 -1.5 hypothetical protein compare
AO353_22830 -0.7 -2.7 cupin compare
AO353_20590 -0.7 -1.4 hydrolase compare
AO353_03775 -0.7 -3.7 pyruvate kinase compare
AO353_22115 -0.7 -2.2 peptidylprolyl isomerase compare
AO353_25330 -0.7 -2.7 biotin-independent malonate decarboxylase subunit beta compare
AO353_17175 -0.7 -1.8 beta-ketoadipyl CoA thiolase compare
AO353_28700 -0.7 -1.5 hypothetical protein compare
AO353_01425 -0.7 -2.9 (2Fe-2S)-binding protein compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source L-Phenylalanine in Pseudomonas fluorescens FW300-N2E3

For nitrogen source L-Phenylalanine across organisms