Experiment set5IT019 for Pseudomonas fluorescens SBW25-INTG

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
PFLU_RS28645 -5.7 -8.8 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS03645 -5.7 -6.8 tetratricopeptide repeat protein compare
PFLU_RS29095 -5.6 -21.3 polyphosphate kinase 1 compare
PFLU_RS01645 -5.5 -6.5 S41 family peptidase compare
PFLU_RS04385 -5.0 -5.9 RNase adapter RapZ compare
PFLU_RS13350 -4.9 -2.0 ParD-like family protein compare
PFLU_RS24650 -4.9 -4.8 SIS domain-containing protein conserved
PFLU_RS14550 -4.9 -3.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS07650 -4.8 -8.1 fatty acid oxidation complex subunit alpha FadB compare
PFLU_RS27365 -4.8 -3.3 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS27620 -4.8 -17.1 acyl-CoA dehydrogenase compare
PFLU_RS29880 -4.8 -6.6 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS24485 -4.7 -14.9 hypothetical protein compare
PFLU_RS02490 -4.7 -4.6 phosphoserine phosphatase SerB compare
PFLU_RS20575 -4.7 -3.2 3-isopropylmalate dehydratase small subunit compare
PFLU_RS24655 -4.7 -6.4 phosphoenolpyruvate--protein phosphotransferase conserved
PFLU_RS20580 -4.7 -5.6 3-isopropylmalate dehydratase large subunit compare
PFLU_RS28390 -4.6 -7.1 methionine biosynthesis protein MetW compare
PFLU_RS03970 -4.6 -7.1 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS29875 -4.6 -8.3 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS28695 -4.6 -4.5 phosphoglycerate dehydrogenase compare
PFLU_RS29885 -4.6 -8.8 LysR family transcriptional regulator compare
PFLU_RS02365 -4.6 -7.7 glycosyltransferase compare
PFLU_RS21965 -4.6 -14.6 transporter compare
PFLU_RS01605 -4.6 -5.4 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS07520 -4.6 -1.1 hypothetical protein compare
PFLU_RS28535 -4.5 -7.0 dihydroxy-acid dehydratase compare
PFLU_RS23920 -4.5 -3.2 septation protein A compare
PFLU_RS24645 -4.5 -7.6 N-acetylglucosamine-6-phosphate deacetylase conserved
PFLU_RS22095 -4.5 -12.0 GTP diphosphokinase compare
PFLU_RS07695 -4.5 -3.1 beta-N-acetylhexosaminidase compare
PFLU_RS26735 -4.5 -6.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS27370 -4.5 -5.3 anthranilate phosphoribosyltransferase compare
PFLU_RS28385 -4.5 -7.4 homoserine O-acetyltransferase compare
PFLU_RS10325 -4.4 -4.3 MFS transporter compare
PFLU_RS24765 -4.4 -13.4 2-isopropylmalate synthase compare
PFLU_RS04465 -4.4 -6.0 ATP phosphoribosyltransferase compare
PFLU_RS25760 -4.3 -5.1 glucose-6-phosphate isomerase compare
PFLU_RS21060 -4.3 -4.2 TetR/AcrR family transcriptional regulator compare
PFLU_RS20625 -4.3 -3.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS27440 -4.3 -3.0 nucleotidyltransferase family protein compare
PFLU_RS20565 -4.3 -6.5 3-isopropylmalate dehydrogenase compare
PFLU_RS04315 -4.3 -2.9 rod shape-determining protein MreD compare
PFLU_RS22835 -4.2 -5.0 amidotransferase compare
PFLU_RS25640 -4.2 -5.0 ketol-acid reductoisomerase compare
PFLU_RS26545 -4.2 -14.2 sel1 repeat family protein compare
PFLU_RS08065 -4.2 -5.0 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS04715 -4.2 -7.5 D-alanine--D-alanine ligase compare
PFLU_RS28650 -4.1 -5.7 RNA pyrophosphohydrolase compare
PFLU_RS02370 -4.1 -11.6 glycosyltransferase compare
PFLU_RS20510 -4.1 -8.4 O-succinylhomoserine sulfhydrylase compare
PFLU_RS22630 -4.1 -15.4 phosphoenolpyruvate synthase compare
PFLU_RS04660 -4.1 -4.0 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS20540 -4.1 -8.3 phosphoribosylanthranilate isomerase compare
PFLU_RS24660 -4.1 -12.6 PTS transporter subunit IIBC conserved
PFLU_RS00180 -4.1 -2.8 tryptophan synthase subunit beta compare
PFLU_RS01620 -4.0 -5.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS25360 -4.0 -3.9 glutamate 5-kinase compare
PFLU_RS03980 -4.0 -6.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
PFLU_RS04470 -4.0 -7.2 histidinol dehydrogenase compare
PFLU_RS26770 -4.0 -17.5 DedA family protein compare
PFLU_RS02590 -4.0 -5.5 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS02790 -4.0 -1.6 TetR family transcriptional regulator compare
PFLU_RS25750 -4.0 -3.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS12975 -3.9 -3.8 DUF934 domain-containing protein compare
PFLU_RS19665 -3.9 -1.3 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
PFLU_RS01900 -3.7 -5.7 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS24125 -3.7 -2.6 cold-shock protein compare
PFLU_RS22105 -3.7 -2.6 cysteine synthase CysM compare
PFLU_RS14810 -3.7 -1.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
PFLU_RS23680 -3.7 -17.2 long-chain fatty acid--CoA ligase compare
PFLU_RS24785 -3.6 -11.0 outer membrane protein assembly factor BamB compare
PFLU_RS25715 -3.6 -2.5 RNA polymerase-binding protein DksA compare
PFLU_RS28655 -3.6 -11.0 HAD family hydrolase compare
PFLU_RS04220 -3.6 -5.5 FadR family transcriptional regulator compare
PFLU_RS09500 -3.6 -1.2 hypothetical protein compare
PFLU_RS01320 -3.6 -3.5 phosphoenolpyruvate carboxykinase compare
PFLU_RS17265 -3.6 -2.3 hypothetical protein compare
PFLU_RS18505 -3.6 -6.4 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS28165 -3.5 -10.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS31275 -3.5 -1.2 hypothetical protein compare
PFLU_RS28965 -3.5 -9.4 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS00175 -3.5 -5.4 tryptophan synthase subunit alpha compare
PFLU_RS07655 -3.5 -6.4 acetyl-CoA C-acyltransferase FadA compare
PFLU_RS28725 -3.5 -13.1 DUF2059 domain-containing protein compare
PFLU_RS05965 -3.5 -1.2 hypothetical protein compare
PFLU_RS22740 -3.5 -2.4 phosphoadenylyl-sulfate reductase compare
PFLU_RS12980 -3.5 -7.4 nitrite/sulfite reductase compare
PFLU_RS21215 -3.4 -1.1 YheU family protein compare
PFLU_RS16935 -3.4 -3.5 CoA ester lyase compare
PFLU_RS25735 -3.4 -2.3 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS09980 -3.4 -16.5 peptidase S41 compare
PFLU_RS12580 -3.4 -8.1 MurR/RpiR family transcriptional regulator compare
PFLU_RS11525 -3.4 -5.1 GntR family transcriptional regulator compare
PFLU_RS24640 -3.4 -9.2 GntR family transcriptional regulator conserved
PFLU_RS31100 -3.4 -3.3 preprotein translocase subunit SecG compare
PFLU_RS30345 -3.4 -2.1 DUF2559 family protein compare
PFLU_RS27650 -3.3 -15.1 biotin synthase BioB compare
PFLU_RS24025 -3.3 -10.6 quinolinate synthase NadA compare
PFLU_RS31425 -3.3 -1.1 hypothetical protein compare
PFLU_RS02990 -3.2 -6.2 precorrin-3B C(17)-methyltransferase compare
PFLU_RS25730 -3.2 -16.3 PAS domain S-box protein compare
PFLU_RS29215 -3.2 -13.0 response regulator transcription factor compare
PFLU_RS13485 -3.2 -16.2 1,4-alpha-glucan branching protein GlgB compare
PFLU_RS22595 -3.2 -2.2 OmpA family protein compare
PFLU_RS25755 -3.2 -2.2 pantoate--beta-alanine ligase compare
PFLU_RS18610 -3.2 -15.3 isocitrate lyase compare
PFLU_RS27685 -3.2 -15.4 malate synthase G compare
PFLU_RS03770 -3.2 -14.4 sulfate adenylyltransferase subunit CysN compare
PFLU_RS28285 -3.1 -3.1 hypothetical protein compare
PFLU_RS01895 -3.1 -7.0 phosphoribosyl-ATP diphosphatase compare
PFLU_RS09845 -3.1 -2.5 biotin carboxyl carrier domain-containing protein compare
PFLU_RS00195 -3.1 -2.0 dodecin domain-containing protein compare
PFLU_RS24790 -3.1 -5.1 tetratricopeptide repeat protein compare
PFLU_RS01625 -3.0 -2.0 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS10430 -3.0 -2.1 peptidase compare
PFLU_RS13715 -3.0 -1.7 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS03765 -3.0 -10.5 sulfate adenylyltransferase subunit CysD compare
PFLU_RS07785 -3.0 -7.8 VacJ family lipoprotein compare
PFLU_RS04435 -3.0 -4.6 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS23305 -3.0 -10.5 arginine N-succinyltransferase compare
PFLU_RS23725 -3.0 -12.0 glucose-6-phosphate dehydrogenase compare
PFLU_RS08505 -3.0 -7.4 protease HtpX compare
PFLU_RS27445 -3.0 -14.6 phosphotransferase compare
PFLU_RS05655 -3.0 -3.3 DeoR/GlpR family transcriptional regulator compare
PFLU_RS26020 -2.9 -11.5 TetR/AcrR family transcriptional regulator compare
PFLU_RS22070 -2.9 -6.1 phosphoribosylglycinamide formyltransferase compare
PFLU_RS04070 -2.9 -4.9 peptide chain release factor 3 compare
PFLU_RS26640 -2.9 -9.8 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS09575 -2.9 -5.4 FadR family transcriptional regulator compare
PFLU_RS04325 -2.9 -15.5 ribonuclease G compare
PFLU_RS14805 -2.9 -1.8 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS31475 -2.8 -2.6 hypothetical protein compare
PFLU_RS04075 -2.8 -0.9 hypothetical protein compare
PFLU_RS24145 -2.8 -5.0 mechanosensitive ion channel compare
PFLU_RS13475 -2.8 -15.1 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase compare
PFLU_RS15410 -2.8 -1.9 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS23310 -2.8 -9.2 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS08155 -2.8 -1.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
PFLU_RS04430 -2.8 -6.4 ATP-binding cassette domain-containing protein compare
PFLU_RS18940 -2.8 -9.7 acyl-CoA dehydrogenase compare
PFLU_RS09055 -2.7 -1.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS04945 -2.7 -3.6 molybdopterin synthase catalytic subunit MoaE compare
PFLU_RS21495 -2.7 -1.9 TlpA family protein disulfide reductase compare
PFLU_RS21665 -2.7 -6.0 MinD/ParA family protein compare
PFLU_RS02205 -2.7 -9.4 potassium/proton antiporter compare
PFLU_RS25190 -2.7 -2.4 hypothetical protein compare
PFLU_RS02460 -2.7 -10.1 alpha/beta fold hydrolase compare
PFLU_RS28315 -2.7 -0.9 response regulator compare
PFLU_RS07805 -2.7 -16.5 transaldolase compare
PFLU_RS31830 -2.7 -0.9 hypothetical protein compare
PFLU_RS29785 -2.7 -15.6 D-hexose-6-phosphate mutarotase conserved
PFLU_RS07640 -2.6 -8.9 universal stress protein compare
PFLU_RS24335 -2.6 -13.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
PFLU_RS19175 -2.6 -7.8 trigger factor compare
PFLU_RS06130 -2.6 -7.0 phosphoenolpyruvate carboxylase compare
PFLU_RS18055 -2.6 -1.7 hydrolase compare
PFLU_RS04440 -2.6 -8.5 outer membrane lipid asymmetry maintenance protein MlaD compare
PFLU_RS22895 -2.6 -16.4 PLP-dependent aminotransferase family protein compare
PFLU_RS18645 -2.5 -1.7 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS28690 -2.5 -12.7 FAD-binding oxidoreductase compare
PFLU_RS25225 -2.5 -7.7 disulfide bond formation protein B compare
PFLU_RS24670 -2.5 -2.4 HigA family addiction module antidote protein compare
PFLU_RS15610 -2.5 -5.4 helix-turn-helix transcriptional regulator compare
PFLU_RS19375 -2.5 -9.6 branched-chain amino acid aminotransferase compare
PFLU_RS19165 -2.5 -4.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS29735 -2.5 -8.0 HlyC/CorC family transporter compare
PFLU_RS25315 -2.5 -4.9 dihydroneopterin triphosphate 2'-epimerase compare
PFLU_RS02280 -2.5 -12.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase compare
PFLU_RS21240 -2.4 -1.5 hypothetical protein compare
PFLU_RS23070 -2.4 -1.1 50S ribosomal protein L32 compare
PFLU_RS18615 -2.4 -1.6 NADH-quinone oxidoreductase subunit A compare
PFLU_RS14170 -2.4 -3.9 TIGR03067 domain-containing protein compare
PFLU_RS03610 -2.4 -5.7 redox-regulated ATPase YchF compare
PFLU_RS19160 -2.4 -11.4 endopeptidase La compare
PFLU_RS01380 -2.4 -5.7 GMP/IMP nucleotidase compare
PFLU_RS30165 -2.3 -8.2 ParA family protein compare
PFLU_RS26565 -2.3 -1.6 rRNA maturation RNase YbeY compare
PFLU_RS29760 -2.3 -8.0 phosphate ABC transporter permease PstA compare
PFLU_RS31530 -2.3 -0.7 transposase compare
PFLU_RS28325 -2.3 -6.6 energy transducer TonB compare
PFLU_RS23460 -2.3 -2.4 antibiotic biosynthesis monooxygenase compare
PFLU_RS21300 -2.3 -4.4 cysteine hydrolase compare
PFLU_RS29280 -2.3 -7.7 tyrosine recombinase XerC compare
PFLU_RS24330 -2.3 -6.6 phosphogluconate dehydratase compare
PFLU_RS15065 -2.3 -5.1 IclR family transcriptional regulator compare
PFLU_RS20515 -2.3 -2.2 amidophosphoribosyltransferase compare
PFLU_RS27305 -2.3 -5.2 anhydro-N-acetylmuramic acid kinase compare
PFLU_RS10595 -2.3 -3.4 hypothetical protein compare
PFLU_RS13540 -2.2 -2.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS11620 -2.2 -10.5 FadR family transcriptional regulator compare
PFLU_RS26905 -2.2 -8.3 transcriptional regulator NrdR compare
PFLU_RS18395 -2.2 -1.3 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS11980 -2.2 -6.5 precorrin-6A synthase (deacetylating) compare
PFLU_RS01965 -2.2 -1.3 ATP-dependent protease subunit HslV compare
PFLU_RS27910 -2.2 -1.0 helix-turn-helix transcriptional regulator compare
PFLU_RS19170 -2.2 -1.5 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
PFLU_RS08165 -2.2 -1.8 acyl carrier protein compare
PFLU_RS18165 -2.2 -10.2 transketolase compare
PFLU_RS16940 -2.2 -9.9 CoA transferase compare


Specific Phenotypes

For 32 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Pseudomonas fluorescens SBW25-INTG

For carbon source N-Acetyl-D-Glucosamine across organisms