Experiment set5IT018 for Dechlorosoma suillum PS

Compare to:

ALP with Sodium nitrite 0.15 mM

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -6.1 -13.1 phosphotransferase system HPr (HPr) family protein compare
Dsui_0742 -5.8 -16.4 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -5.8 -7.9 putative permease compare
Dsui_2816 -5.3 -7.2 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3139 -4.2 -5.0 outer membrane assembly lipoprotein YfgL compare
Dsui_3524 -3.4 -11.5 signal transduction histidine kinase compare
Dsui_1855 -3.1 -2.0 hypothetical protein compare
Dsui_2717 -3.1 -5.2 RNA polymerase-binding protein DksA compare
Dsui_1000 -2.9 -2.0 hypothetical protein compare
Dsui_3158 -2.9 -5.1 Na+/H+ dicarboxylate symporter compare
Dsui_3523 -2.8 -10.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0487 -2.8 -1.9 hemerythrin HHE cation binding domain-containing protein compare
Dsui_3272 -2.8 -1.9 putative threonine efflux protein compare
Dsui_1529 -2.7 -8.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2667 -2.7 -1.8 acetyltransferase compare
Dsui_2921 -2.7 -2.6 isochorismate synthase family protein compare
Dsui_2033 -2.7 -1.8 transcriptional regulator compare
Dsui_2342 -2.7 -1.8 multidrug resistance efflux pump compare
Dsui_0297 -2.7 -1.8 sugar fermentation stimulation protein compare
Dsui_1577 -2.7 -2.5 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_3171 -2.7 -1.8 putative protein-disulfide isomerase compare
Dsui_3179 -2.7 -1.8 signal transduction histidine kinase compare
Dsui_2054 -2.6 -1.7 hypothetical protein compare
Dsui_3007 -2.6 -0.9 hydrogenase assembly chaperone HypC/HupF compare
Dsui_3527 -2.6 -0.8 ketol-acid reductoisomerase compare
Dsui_2032 -2.6 -1.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1851 -2.6 -1.7 signal transduction histidine kinase compare
Dsui_1620 -2.5 -1.7 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2238 -2.5 -2.4 ABC-type dipeptide transport system, periplasmic component compare
Dsui_1165 -2.5 -1.7 Ni,Fe-hydrogenase I large subunit compare
Dsui_0778 -2.5 -3.7 small protein A (tmRNA-binding) compare
Dsui_0966 -2.5 -2.4 methyl-accepting chemotaxis protein compare
Dsui_1978 -2.5 -2.9 putative lipoprotein compare
Dsui_2775 -2.5 -2.8 hypothetical protein compare
Dsui_0520 -2.5 -14.1 transcriptional regulator compare
Dsui_1403 -2.5 -2.8 putative NTP binding protein (contains STAS domain) compare
Dsui_1659 -2.4 -1.7 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1553 -2.4 -1.9 regulator of competence-specific genes compare
Dsui_0200 -2.4 -1.6 hypothetical protein compare
Dsui_2740 -2.4 -1.6 putative integral membrane protein compare
Dsui_0515 -2.4 -1.3 hypothetical protein compare
Dsui_1610 -2.4 -1.6 Protein of unknown function (DUF3079) compare
Dsui_2123 -2.4 -1.4 EAL domain-containing protein compare
Dsui_3278 -2.3 -2.3 molybdenum cofactor biosynthesis protein A compare
Dsui_2189 -2.3 -4.1 acyl-CoA synthetase (NDP forming) compare
Dsui_3352 -2.3 -1.6 cAMP-binding protein compare
Dsui_0558 -2.3 -1.6 tetratricopeptide repeat protein compare
Dsui_0313 -2.3 -2.2 putative transcriptional regulator compare
Dsui_0003 -2.3 -6.0 putative Zn-dependent protease compare
Dsui_1242 -2.3 -1.6 hypothetical protein compare
Dsui_1839 -2.3 -1.5 hypothetical protein compare
Dsui_2518 -2.3 -1.5 hypothetical protein compare
Dsui_1819 -2.2 -1.0 4-oxalocrotonate tautomerase family enzyme compare
Dsui_2895 -2.2 -1.5 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1674 -2.2 -1.5 EAL domain-containing protein compare
Dsui_0553 -2.2 -1.5 putative nitrogen fixation protein compare
Dsui_0174 -2.2 -1.5 hypothetical protein compare
Dsui_0509 -2.2 -3.0 MauM/NapG family ferredoxin-type protein compare
Dsui_0418 -2.2 -1.5 putative Na+-dependent transporter compare
Dsui_0209 -2.2 -1.5 hypothetical protein compare
Dsui_0431 -2.2 -2.6 putative permease, DMT superfamily compare
Dsui_2805 -2.2 -2.1 EamA-like transporter family compare
Dsui_1817 -2.2 -1.5 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_2389 -2.2 -1.5 putative membrane protein compare
Dsui_3478 -2.2 -1.0 hypothetical protein compare
Dsui_1370 -2.2 -1.5 putative permease, DMT superfamily compare
Dsui_2272 -2.2 -1.4 hypothetical protein compare
Dsui_2329 -2.2 -1.5 putative dehydrogenase compare
Dsui_0708 -2.2 -4.5 PAS domain S-box compare
Dsui_3377 -2.2 -1.4 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_3231 -2.1 -1.5 hypothetical protein compare
Dsui_2893 -2.1 -2.5 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3298 -2.1 -14.6 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1702 -2.1 -1.4 TonB family protein compare
Dsui_3366 -2.1 -1.4 glycerophosphoryl diester phosphodiesterase compare
Dsui_0252 -2.1 -1.2 TIGR00252 family protein compare
Dsui_1401 -2.1 -8.3 surface lipoprotein compare
Dsui_0865 -2.1 -2.4 hypothetical protein compare
Dsui_2290 -2.1 -1.4 putative paraquat-inducible protein A compare
Dsui_3118 -2.1 -1.4 polyferredoxin compare
Dsui_0878 -2.1 -1.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_2081 -2.1 -2.4 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_1970 -2.1 -7.0 metalloendopeptidase-like membrane protein compare
Dsui_0620 -2.1 -3.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_1396 -2.1 -1.4 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0958 -2.1 -1.7 ferredoxin compare
Dsui_3448 -2.1 -1.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0945 -2.1 -1.1 Iron-sulfur cluster assembly accessory protein compare
Dsui_3274 -2.0 -1.9 dihydrodipicolinate reductase compare
Dsui_1402 -2.0 -4.9 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1974 -2.0 -1.4 hypothetical protein compare
Dsui_1884 -2.0 -2.3 histidine kinase compare
Dsui_0557 -2.0 -1.3 NifQ compare
Dsui_3026 -2.0 -1.1 hydrogenase maturation protease compare
Dsui_1669 -2.0 -1.3 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_1618 -2.0 -1.4 signal transduction histidine kinase compare
Dsui_1893 -2.0 -1.1 putative membrane protein compare
Dsui_3257 -2.0 -1.9 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_0653 -2.0 -1.9 putative SAM-dependent methyltransferase compare
Dsui_0870 -2.0 -10.1 putative membrane protein compare
Dsui_3178 -2.0 -1.3 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_0764 -2.0 -1.3 nitrogen regulatory protein PII compare
Dsui_3077 -2.0 -1.3 hypothetical protein compare
Dsui_3392 -2.0 -14.2 carboxylate-amine ligase, YbdK family compare
Dsui_0393 -2.0 -1.3 glycosyltransferase compare
Dsui_1879 -2.0 -1.3 luciferase family oxidoreductase, group 1 compare
Dsui_2085 -2.0 -1.3 NADPH-dependent FMN reductase compare
Dsui_0105 -2.0 -2.9 NAD-dependent aldehyde dehydrogenase compare
Dsui_0033 -2.0 -2.5 Zn-dependent protease with chaperone function compare
Dsui_3008 -1.9 -1.3 hydrogenase expression/formation protein compare
Dsui_1670 -1.9 -1.3 cytochrome c peroxidase compare
Dsui_3006 -1.9 -0.9 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_0871 -1.9 -0.6 hypothetical protein compare
Dsui_2341 -1.9 -1.3 ABC-type multidrug transport system, ATPase component compare
Dsui_3351 -1.9 -1.3 cytochrome c peroxidase compare
Dsui_0763 -1.9 -1.8 ammonium transporter compare
Dsui_3271 -1.9 -1.3 ATP-dependent protease Clp, ATPase subunit compare
Dsui_3426 -1.9 -1.8 transcriptional regulator compare
Dsui_1105 -1.9 -2.2 methylmalonyl-CoA mutase family protein compare
Dsui_3330 -1.9 -1.0 hypothetical protein compare
Dsui_3423 -1.9 -1.1 hydroxypyruvate isomerase compare
Dsui_2772 -1.9 -1.2 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_1888 -1.9 -1.3 putative domain HDIG-containing protein compare
Dsui_0838 -1.9 -2.5 hypothetical protein compare
Dsui_1615 -1.9 -1.0 hypothetical protein compare
Dsui_1833 -1.9 -1.3 nitrate transport ATP-binding subunits C and D compare
Dsui_2935 -1.9 -1.3 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2969 -1.9 -1.8 uroporphyrin-III C-methyltransferase compare
Dsui_0654 -1.9 -1.3 hypothetical protein compare
Dsui_2397 -1.9 -3.4 cAMP-binding protein compare
Dsui_1442 -1.9 -1.2 putative efflux protein, MATE family compare
Dsui_0107 -1.9 -1.3 PDZ domain-containing protein compare
Dsui_1388 -1.9 -1.3 hypothetical protein compare
Dsui_3126 -1.9 -1.3 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_1619 -1.9 -1.3 putative membrane-associated, metal-dependent hydrolase compare
Dsui_3109 -1.8 -1.2 cytochrome c, mono- and diheme variants family compare
Dsui_0015 -1.8 -1.2 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_3150 -1.8 -1.2 electron transfer flavoprotein, beta subunit compare
Dsui_3125 -1.8 -1.8 cytochrome c, mono- and diheme variants family compare
Dsui_0618 -1.8 -1.2 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_1992 -1.8 -4.5 ribosomal protein L9 compare
Dsui_2819 -1.8 -1.2 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2866 -1.8 -1.2 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0573 -1.8 -0.8 ferredoxin-like protein compare
Dsui_0955 -1.8 -1.2 nitrogenase iron protein compare
Dsui_2651 -1.8 -1.4 ankyrin repeat-containing protein compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_0533 -1.8 -2.0 cobyrinic acid a,c-diamide synthase compare
Dsui_1599 -1.8 -12.1 putative enzyme of heme biosynthesis compare
Dsui_0881 -1.8 -1.2 cAMP-binding protein compare
Dsui_1676 -1.8 -1.2 biopolymer transport protein compare
Dsui_3226 -1.8 -2.3 putative SAM-dependent methyltransferase compare
Dsui_0940 -1.8 -1.7 Nif-specific regulatory protein compare
Dsui_2610 -1.8 -1.2 single-stranded DNA-binding protein compare
Dsui_1353 -1.8 -1.2 flagellar capping protein compare
Dsui_1825 -1.8 -1.2 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_2228 -1.8 -1.2 Zn-dependent alcohol dehydrogenase compare
Dsui_1207 -1.8 -5.5 putative calcium-binding protein compare
Dsui_3156 -1.8 -1.2 putative permease compare
Dsui_1739 -1.8 -1.7 flagellar basal-body P-ring protein compare
Dsui_1282 -1.8 -2.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_0171 -1.7 -1.2 putative transcriptional regulator compare
Dsui_0022 -1.7 -2.0 hypothetical protein compare
Dsui_3419 -1.7 -2.9 transcriptional regulator compare
Dsui_2072 -1.7 -1.2 Pirin-related protein compare
Dsui_1360 -1.7 -2.0 hypothetical protein compare
Dsui_0412 -1.7 -1.6 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_0028 -1.7 -1.2 putative effector of murein hydrolase compare
Dsui_0279 -1.7 -1.6 K+-transporting ATPase, KdpA compare
Dsui_1398 -1.7 -8.9 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1852 -1.7 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2094 -1.7 -1.6 putative autotransporter protein compare
Dsui_2668 -1.7 -1.1 putative phosphatase compare
Dsui_0215 -1.7 -1.0 hypothetical protein compare
Dsui_0523 -1.7 -0.9 putative membrane protein compare
Dsui_2933 -1.7 -1.1 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1349 -1.7 -1.1 hypothetical protein compare
Dsui_2489 -1.7 -1.1 polyhydroxyalkanoate depolymerase, intracellular compare
Dsui_1198 -1.7 -6.2 apolipoprotein N-acyltransferase compare
Dsui_1537 -1.7 -1.1 DNA repair protein radc compare
Dsui_2787 -1.7 -1.2 membrane carboxypeptidase/penicillin-binding protein compare
Dsui_1399 -1.7 -6.2 conserved hypothetical integral membrane protein compare
Dsui_1075 -1.7 -1.1 hypothetical protein compare
Dsui_1841 -1.7 -1.1 hypothetical protein compare
Dsui_2599 -1.7 -0.9 hypothetical protein compare
Dsui_1149 -1.7 -1.8 Zn-dependent protease with chaperone function compare
Dsui_0225 -1.7 -1.1 hypothetical protein compare
Dsui_2364 -1.7 -1.1 ABC-type sugar transport system, periplasmic component compare
Dsui_3318 -1.7 -3.1 cytochrome c, mono- and diheme variants family compare
Dsui_2095 -1.7 -0.8 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_3475 -1.7 -1.1 methyl-accepting chemotaxis protein compare
Dsui_1260 -1.7 -1.1 multimeric flavodoxin WrbA compare
Dsui_3393 -1.7 -9.0 Kef-type K+ transport system, membrane component compare
Dsui_2233 -1.7 -1.1 catalase/peroxidase HPI compare
Dsui_3240 -1.7 -8.3 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3115 -1.7 -0.8 hypothetical protein compare
Dsui_1931 -1.7 -1.8 transcriptional regulator compare
Dsui_2025 -1.7 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_2991 -1.7 -3.2 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0032 -1.7 -1.1 NAD-dependent protein deacetylase, SIR2 family compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in stress experiments

For stress Sodium nitrite across organisms