Experiment set5IT014 for Methanococcus maripaludis S2

200 most detrimental genes:

gene	name	fitness	t score	description
MMP_RS07820		+1.2	4.9	UPF0104 family protein
MMP_RS08595		+1.1	1.2	flagellar protein C
MMP_RS07860		+0.9	1.5	hypothetical protein
MMP_RS01370		+0.9	6.4	acetate--CoA ligase family protein
MMP_RS00945		+0.8	2.1	PadR family transcriptional regulator
MMP_RS06600		+0.7	2.4	class III signal peptide-containing protein
MMP_RS05640		+0.7	3.1	UTP--glucose-1-phosphate uridylyltransferase GalU
MMP_RS04520		+0.7	3.1	nucleoside deaminase
MMP_RS07115		+0.6	5.4	MBL fold metallo-hydrolase
MMP_RS05535		+0.6	3.6	hypothetical protein
MMP_RS01545		+0.6	1.1	CBS domain-containing protein
MMP_RS01775		+0.6	2.2	TIGR00297 family protein
MMP_RS08155		+0.6	3.5	hypothetical protein
MMP_RS07095		+0.6	1.7	PspC domain-containing protein
MMP_RS05580		+0.6	4.8	glycosyltransferase
MMP_RS06535		+0.5	3.0	2-oxoacid:acceptor oxidoreductase family protein
MMP_RS03800		+0.5	2.3	hypothetical protein
MMP_RS07345		+0.5	2.9	glycine synthesis protein GlyXL (from data)
MMP_RS01540		+0.5	2.4	DUF504 domain-containing protein
MMP_RS07330		+0.5	4.6	membrane protein
MMP_RS07355		+0.5	1.1	transcription factor S
MMP_RS01935		+0.5	3.8	DUF58 domain-containing protein
MMP_RS08215		+0.5	2.3	DUF483 domain-containing protein
MMP_RS01930		+0.5	3.8	hypothetical protein
MMP_RS08660		+0.5	3.2	DHH family phosphoesterase
MMP_RS00530		+0.5	3.7	tRNA pseudouridine(54/55) synthase Pus10
MMP_RS07130		+0.5	3.3	coenzyme F420 hydrogenase subunit gamma
MMP_RS07435		+0.5	1.3	GMP synthase subunit A
MMP_RS07875		+0.4	2.5	hypothetical protein
MMP_RS01525		+0.4	1.6	nucleoside-diphosphate kinase
MMP_RS02805		+0.4	1.2	HEPN domain-containing protein
MMP_RS08705		+0.4	3.2	sulfopyruvate decarboxylase subunit beta
MMP_RS05250		+0.4	0.9	NFYB/HAP3 family transcription factor subunit
MMP_RS04710		+0.4	0.8	hypothetical protein
MMP_RS02110		+0.4	1.5	hypothetical protein
MMP_RS01940		+0.4	2.1	MoxR family ATPase
MMP_RS07125		+0.4	2.0	coenzyme F420-reducing hydrogenase FrhD protein
MMP_RS07120		+0.4	3.0	coenzyme F420 hydrogenase subunit alpha
MMP_RS04985		+0.4	1.1	DUF2180 family protein
MMP_RS06575		+0.4	1.8	fluoride efflux transporter CrcB
MMP_RS01975		+0.4	3.3	hypothetical protein
MMP_RS08605		+0.4	2.1	flagellar protein E
MMP_RS00740		+0.4	1.3	cyclase family protein
MMP_RS08440		+0.4	1.2	cell division protein SepF
MMP_RS08785		+0.4	0.7	RNA-protein complex protein Nop10
MMP_RS08890		+0.3	2.8	glycosyltransferase family 4 protein
MMP_RS07850		+0.3	1.4	prephenate dehydratase
MMP_RS03910		+0.3	0.9	hypothetical protein
MMP_RS07890		+0.3	1.2	OB-fold nucleic acid binding domain-containing protein
MMP_RS02470		+0.3	0.9	helix-turn-helix transcriptional regulator
MMP_RS08580		+0.3	1.0	flagellin
MMP_RS04035		+0.3	1.2	hypothetical protein
MMP_RS09035		+0.3	1.0	hypothetical protein
MMP_RS06435		+0.3	2.0	CBS domain-containing protein
MMP_RS06540		+0.3	1.7	3-methyl-2-oxobutanoate dehydrogenase subunit VorB
MMP_RS01945		+0.3	1.8	DUF4350 domain-containing protein
MMP_RS04265		+0.3	1.5	coenzyme F420-reducing hydrogenase FrhD protein
MMP_RS02475		+0.3	0.8	hypothetical protein
MMP_RS03215		+0.3	2.5	MBL fold metallo-hydrolase
MMP_RS06745		+0.3	1.7	DUF2119 domain-containing protein
MMP_RS03450		+0.3	0.7	glycine synthesis protein GlyXS (from data)
MMP_RS07410		+0.3	2.3	4-demethylwyosine synthase TYW1
MMP_RS02550		+0.3	1.9	helix-turn-helix transcriptional regulator
MMP_RS06155		+0.3	0.7	DUF4186 domain-containing protein
MMP_RS01580		+0.3	1.8	PQQ-binding-like beta-propeller repeat protein
MMP_RS02815		+0.3	1.4	hypothetical protein
MMP_RS08275		+0.3	2.4	hypothetical protein
MMP_RS04740		+0.3	1.5	DUF473 domain-containing protein
MMP_RS01950		+0.3	2.4	hypothetical protein
MMP_RS07135		+0.3	1.9	coenzyme F420 hydrogenase subunit beta
MMP_RS06460		+0.3	1.5	pyrimidine dimer DNA glycosylase/endonuclease V
MMP_RS03820		+0.3	1.4	EamA family transporter
MMP_RS08430		+0.3	0.9	HAD family hydrolase
MMP_RS03320		+0.3	0.8	metal-dependent transcriptional regulator
MMP_RS04480		+0.3	2.5	lysine 2 3-aminomutase
MMP_RS06165		+0.3	2.2	ABC transporter permease
MMP_RS02690		+0.3	1.7	FmdE family protein
MMP_RS06290		+0.3	1.4	DNA repair and recombination protein RadA
MMP_RS05635		+0.3	1.5	NAD-dependent epimerase/dehydratase family protein
MMP_RS02310		+0.3	0.8	RimK-like ATPgrasp N-terminal domain-containing protein
MMP_RS02490		+0.3	1.6	hypothetical protein
MMP_RS07925		+0.3	1.2	haloacid dehalogenase
MMP_RS01885		+0.2	1.7	Gfo/Idh/MocA family oxidoreductase
MMP_RS05720		+0.2	1.5	signal recognition particle subunit SRP19/SEC65 family protein
MMP_RS02290		+0.2	1.6	MBL fold metallo-hydrolase
MMP_RS03535		+0.2	1.1	helix-turn-helix transcriptional regulator
MMP_RS00940		+0.2	1.8	daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein
MMP_RS06570		+0.2	1.0	DUF190 domain-containing protein
MMP_RS01880		+0.2	1.6	DegT/DnrJ/EryC1/StrS family aminotransferase
MMP_RS05660		+0.2	1.5	phosphate ABC transporter substrate-binding protein
MMP_RS08235		+0.2	1.0	hypothetical protein
MMP_RS08315		+0.2	0.5	S-methyl-5-thioribose-1-phosphate isomerase
MMP_RS06480		+0.2	1.6	ABC transporter substrate-binding protein
MMP_RS02085		+0.2	1.5	inosine/xanthosine triphosphatase
MMP_RS06445		+0.2	1.4	DUF89 domain-containing protein
MMP_RS03440		+0.2	0.6	MoaD/ThiS family protein
MMP_RS05280		+0.2	1.5	COG1361 S-layer family protein
MMP_RS01270		+0.2	2.0	prepilin peptidase
MMP_RS03110		+0.2	1.4	glycosyltransferase family 2 protein
MMP_RS01650		+0.2	0.5	sulfurtransferase TusA family protein
MMP_RS04715		+0.2	1.3	CBS domain-containing protein
MMP_RS06970		+0.2	1.3	ribosomal protein S18-alanine N-acetyltransferase
MMP_RS02960		+0.2	1.6	class I SAM-dependent methyltransferase family protein
MMP_RS06550		+0.2	1.4	AMP-binding protein
MMP_RS06875		+0.2	1.1	FAD-dependent oxidoreductase
MMP_RS04650		+0.2	1.2	tetratricopeptide repeat protein
MMP_RS07075		+0.2	0.9	phosphomannomutase/phosphoglucomutase
MMP_RS01260		+0.2	0.9	HDIG domain-containing protein
MMP_RS01875		+0.2	1.4	N-acetyltransferase
MMP_RS08400		+0.2	1.4	MJ0307 family thioredoxin
MMP_RS00930		+0.2	1.3	ABC transporter permease
MMP_RS00450		+0.2	0.6	4Fe-4S binding protein
MMP_RS06530		+0.2	1.5	bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
MMP_RS01895		+0.2	1.6	flippase
MMP_RS05530		+0.2	1.4	signal peptide peptidase SppA
MMP_RS08855		+0.2	1.3	hypothetical protein
MMP_RS06555		+0.2	1.0	cupin domain-containing protein
MMP_RS05960		+0.2	1.6	CoB--CoM heterodisulfide reductase subunit B
MMP_RS06275		+0.2	1.7	ATP-dependent DNA helicase
MMP_RS03130		+0.2	1.4	hypothetical protein
MMP_RS07420		+0.2	1.3	metalloregulator ArsR/SmtB family transcription factor
MMP_RS06000		+0.2	0.6	divalent-cation tolerance protein CutA
MMP_RS06905		+0.2	0.6	hypothetical protein
MMP_RS05825		+0.2	1.2	peptidyl-prolyl cis-trans isomerase
MMP_RS06170		+0.2	1.2	ABC transporter ATP-binding protein
MMP_RS05150		+0.2	1.5	hypothetical protein
MMP_RS06545		+0.2	1.0	ferredoxin family protein
MMP_RS03790		+0.2	1.5	hypothetical protein
MMP_RS08470		+0.2	1.3	ATP-binding cassette domain-containing protein
MMP_RS02455		+0.2	1.2	hypothetical protein
MMP_RS08175		+0.2	1.2	7-cyano-7-deazaguanine synthase
MMP_RS01435		+0.2	0.8	DMT family transporter
MMP_RS02315		+0.2	1.1	RimK family alpha-L-glutamate ligase
MMP_RS03150		+0.2	1.2	phosphoglycerate mutase
MMP_RS05665		+0.2	1.0	phosphate ABC transporter permease subunit PstC
MMP_RS05980		+0.2	1.1	ferritin
MMP_RS08775		+0.2	1.2	methanogenesis marker 9 domain-containing protein
MMP_RS03585		+0.2	0.4	Hsp20/alpha crystallin family protein
MMP_RS07185		+0.2	1.3	pyridoxal phosphate-dependent aminotransferase
MMP_RS04105		+0.2	0.9	MarR family transcriptional regulator
MMP_RS08160		+0.2	0.9	EamA family transporter
MMP_RS03890		+0.2	0.9	DUF2540 domain-containing protein
MMP_RS03520		+0.2	0.6	YwbE family protein
MMP_RS00665		+0.2	0.9	hypothetical protein
MMP_RS08455		+0.2	0.7	multiprotein bridging factor aMBF1
MMP_RS06140		+0.2	0.6	radical SAM protein
MMP_RS00910		+0.2	1.1	2-phosphosulfolactate phosphatase
MMP_RS03115		+0.2	1.4	hypothetical protein
MMP_RS05235		+0.2	1.0	exodeoxyribonuclease III
MMP_RS03990		+0.2	1.2	recombinase family protein
MMP_RS08600		+0.2	0.7	flagellar protein D
MMP_RS04445		+0.2	1.1	P-II family nitrogen regulator
MMP_RS01165		+0.2	1.1	DUF434 domain-containing protein
MMP_RS07090		+0.2	1.0	tRNA (adenine-N1)-methyltransferase
MMP_RS09050		+0.2	0.5	CAP domain-containing protein
MMP_RS03875		+0.2	0.8	hypothetical protein
MMP_RS00660		+0.2	1.1	alkaline phosphatase family protein
MMP_RS04430		+0.1	0.8	DUF1847 domain-containing protein
MMP_RS00140		+0.1	0.8	DUF192 domain-containing protein
MMP_RS05695		+0.1	1.2	phospholipase D-like domain-containing protein
MMP_RS04790		+0.1	1.1	4-hydroxy-tetrahydrodipicolinate reductase
MMP_RS03405		+0.1	1.0	RNA 3'-terminal phosphate cyclase
MMP_RS06610		+0.1	0.7	DUF2334 domain-containing protein
MMP_RS01465		+0.1	0.5	hypothetical protein
MMP_RS01990		+0.1	0.5	hypothetical protein
MMP_RS05620		+0.1	1.3	radical SAM protein
MMP_RS00240		+0.1	1.3	type II secretion system F family protein
MMP_RS03615		+0.1	1.1	4Fe-4S binding protein
MMP_RS08575		+0.1	1.3	hypothetical protein
MMP_RS07805		+0.1	1.0	ABC transporter permease
MMP_RS01185		+0.1	0.8	hypothetical protein
MMP_RS03625		+0.1	1.0	cell wall-binding protein
MMP_RS03745		+0.1	0.9	phenylacetate--CoA ligase
MMP_RS06150		+0.1	0.9	hypothetical protein
MMP_RS06060		+0.1	0.7	hypothetical protein
MMP_RS05020		+0.1	0.5	hypothetical protein
MMP_RS06910		+0.1	1.0	RlmF-related methyltransferase
MMP_RS01960		+0.1	0.2	hypothetical protein
MMP_RS08555		+0.1	0.7	hypothetical protein
MMP_RS07590		+0.1	1.2	hypothetical protein
MMP_RS06735		+0.1	0.8	class I SAM-dependent rRNA methyltransferase
MMP_RS02590		+0.1	0.8	low molecular weight phosphatase family protein
MMP_RS04980		+0.1	1.1	DUF2193 domain-containing protein
MMP_RS00325		+0.1	0.3	RNA-binding protein
MMP_RS04510		+0.1	1.0	ABC transporter permease subunit
MMP_RS01300		+0.1	1.1	hypothetical protein
MMP_RS01470		+0.1	0.5	ATP-binding cassette domain-containing protein
MMP_RS00825		+0.1	0.6	fumarylacetoacetate hydrolase family protein
MMP_RS01090		+0.1	0.9	ABC transporter substrate-binding protein
MMP_RS03785		+0.1	0.7	cupin domain-containing protein
MMP_RS04195		+0.1	0.6	flavodoxin
MMP_RS02365		+0.1	0.9	nitrogen fixation
MMP_RS09025		+0.1	0.3	hypothetical protein
MMP_RS01655		+0.1	0.8	DsrE family protein
MMP_RS00540		+0.1	0.9	PLP-dependent aminotransferase family protein
MMP_RS03630		+0.1	1.1	hypothetical protein
MMP_RS04720		+0.1	0.4	DedA family protein
MMP_RS06035		+0.1	0.8	glycosyltransferase family 2 protein
MMP_RS06560		+0.1	1.0	hypothetical protein
MMP_RS01455		+0.1	0.9	nickel pincer cofactor biosynthesis protein LarC

Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments