Experiment set5IT012 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A

200 most important genes:

  gene name fitness t score description  
RR42_RS17355 -4.0 -1.5 hypothetical protein compare
RR42_RS00715 -3.2 -2.2 ferritin compare
RR42_RS07380 -2.7 -5.4 dihydrolipoamide dehydrogenase compare
RR42_RS11770 -2.3 -2.9 cyclase compare
RR42_RS12015 -2.1 -2.8 dihydrolipoamide acyltransferase compare
RR42_RS21470 -2.1 -1.3 hypothetical protein compare
RR42_RS20195 -2.1 -1.1 ATPase F0F1 compare
RR42_RS21220 -2.0 -3.0 iron transporter FeoB compare
RR42_RS14365 -1.9 -2.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS05755 -1.9 -3.6 enoyl-CoA hydratase compare
RR42_RS00600 -1.9 -1.2 DeoR family transcriptional regulator compare
RR42_RS06095 -1.9 -3.7 hypothetical protein compare
RR42_RS13620 -1.8 -1.1 ferredoxin compare
RR42_RS07555 -1.8 -2.5 potassium transporter Kup compare
RR42_RS20775 -1.7 -1.3 hypothetical protein compare
RR42_RS13465 -1.7 -3.6 phosphate transporter permease subunit PstC compare
RR42_RS07365 -1.7 -2.8 pyruvate dehydrogenase compare
RR42_RS26900 -1.7 -2.6 enoyl-CoA hydratase compare
RR42_RS12615 -1.6 -2.9 LexA family transcriptional regulator compare
RR42_RS06250 -1.6 -2.6 dihydrodipicolinate synthase compare
RR42_RS06255 -1.5 -1.5 lipoprotein compare
RR42_RS02500 -1.4 -1.2 TetR family transcriptional regulator compare
RR42_RS19085 -1.4 -1.3 cytochrome C biogenesis protein ResB compare
RR42_RS18850 -1.4 -2.3 preprotein translocase subunit TatC compare
RR42_RS31885 -1.4 -2.8 sialidase compare
RR42_RS32085 -1.4 -1.5 hypothetical protein compare
RR42_RS24040 -1.3 -4.1 hypothetical protein compare
RR42_RS01920 -1.3 -2.0 protoheme IX farnesyltransferase compare
RR42_RS12925 -1.3 -2.1 ATPase compare
RR42_RS20095 -1.3 -2.3 peroxiredoxin compare
RR42_RS19005 -1.3 -3.7 3-dehydroquinate synthase compare
RR42_RS21955 -1.2 -1.2 hypothetical protein compare
RR42_RS14055 -1.2 -2.2 elongation factor 4 compare
RR42_RS24690 -1.2 -1.5 hypothetical protein compare
RR42_RS10920 -1.2 -1.9 hypothetical protein compare
RR42_RS12590 -1.2 -1.1 50S ribosomal protein L9 compare
RR42_RS28885 -1.2 -3.6 membrane protein compare
RR42_RS36450 -1.2 -1.2 acyl dehydratase compare
RR42_RS02850 -1.2 -2.9 phoH-like protein compare
RR42_RS31535 -1.2 -3.4 transcriptional regulator compare
RR42_RS15845 -1.2 -2.4 biotin transporter BioY compare
RR42_RS27550 -1.2 -1.0 hypothetical protein compare
RR42_RS25640 -1.2 -2.1 3-hydroxyisobutyrate dehydrogenase compare
RR42_RS29335 -1.1 -2.2 integrase compare
RR42_RS04255 -1.1 -1.8 chemotaxis protein CheW compare
RR42_RS13125 -1.1 -3.3 pyrrolo-quinoline quinone compare
RR42_RS05290 -1.1 -1.9 ankyrin compare
RR42_RS14895 -1.1 -3.1 peptidase compare
RR42_RS31530 -1.1 -2.2 histidine kinase compare
RR42_RS01895 -1.1 -4.8 MFS transporter compare
RR42_RS08175 -1.1 -1.3 hypothetical protein compare
RR42_RS03080 -1.1 -3.4 recombinase RecA compare
RR42_RS32740 -1.1 -1.1 enoyl-CoA hydratase compare
RR42_RS33255 -1.1 -1.8 protein-tyrosine phosphatase compare
RR42_RS00545 -1.1 -2.9 transglutaminase compare
RR42_RS06000 -1.1 -1.3 antibiotic biosynthesis monooxygenase compare
RR42_RS13265 -1.1 -2.4 GntR family transcriptional regulator compare
RR42_RS28550 -1.1 -3.9 enoyl-CoA hydratase compare
RR42_RS31790 -1.1 -1.5 nitrite reductase compare
RR42_RS07385 -1.1 -1.8 Phasin (PHA-granule associated protein) compare
RR42_RS14755 -1.1 -2.9 hypothetical protein compare
RR42_RS04475 -1.1 -6.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS03365 -1.0 -2.2 fructose ABC transporter, permease component (FrcC) (from data) compare
RR42_RS27210 -1.0 -2.8 hypothetical protein compare
RR42_RS22230 -1.0 -1.3 hypothetical protein compare
RR42_RS26535 -1.0 -1.8 diguanylate cyclase compare
RR42_RS13040 -1.0 -2.8 iron transporter compare
RR42_RS02860 -1.0 -1.7 hypothetical protein compare
RR42_RS12040 -1.0 -6.1 MFS transporter compare
RR42_RS02705 -1.0 -1.8 Holliday junction DNA helicase RuvA compare
RR42_RS15000 -1.0 -2.1 GTP cyclohydrolase compare
RR42_RS07565 -1.0 -5.0 transcription accessory protein compare
RR42_RS16950 -1.0 -3.0 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RR42_RS01705 -1.0 -1.8 Fis family transcriptional regulator compare
RR42_RS35240 -1.0 -2.7 acyl-CoA dehydrogenase compare
RR42_RS09630 -1.0 -1.5 hypothetical protein compare
RR42_RS31900 -1.0 -1.7 short-chain dehydrogenase compare
RR42_RS10290 -1.0 -2.1 hypothetical protein compare
RR42_RS31595 -1.0 -1.4 hypothetical protein compare
RR42_RS21945 -1.0 -2.3 hypothetical protein compare
RR42_RS00595 -1.0 -4.5 lipoprotein compare
RR42_RS03325 -1.0 -3.4 membrane protein compare
RR42_RS33250 -1.0 -4.3 tyrosine protein kinase compare
RR42_RS23140 -1.0 -0.9 peptidylprolyl isomerase compare
RR42_RS15640 -1.0 -1.0 hypothetical protein compare
RR42_RS17665 -1.0 -1.8 chorismate lyase compare
RR42_RS01925 -1.0 -5.6 photosynthetic protein synthase I compare
RR42_RS19745 -0.9 -2.5 RlpA-like protein compare
RR42_RS29280 -0.9 -1.2 hypothetical protein compare
RR42_RS01085 -0.9 -3.6 chemotaxis protein CheY compare
RR42_RS27215 -0.9 -2.7 LysR family transcriptional regulator compare
RR42_RS08390 -0.9 -2.2 hypothetical protein compare
RR42_RS15905 -0.9 -4.9 phosphoenolpyruvate carboxylase compare
RR42_RS23595 -0.9 -2.3 dTDP-4-dehydrorhamnose 3,5-epimerase compare
RR42_RS13800 -0.9 -4.0 formyltetrahydrofolate deformylase compare
RR42_RS19090 -0.9 -1.0 cytochrome C compare
RR42_RS16905 -0.9 -2.9 Imidazolonepropionase (EC 3.5.2.7) (from data) compare
RR42_RS00510 -0.9 -2.3 transcriptional regulator compare
RR42_RS14860 -0.9 -1.6 hypothetical protein compare
RR42_RS07440 -0.9 -2.4 hypothetical protein compare
RR42_RS35995 -0.9 -1.8 membrane protein compare
RR42_RS10400 -0.9 -1.8 hypothetical protein compare
RR42_RS04770 -0.9 -0.9 methylglyoxal synthase compare
RR42_RS21755 -0.9 -1.7 shikimate dehydrogenase compare
RR42_RS00440 -0.9 -1.0 hypothetical protein compare
RR42_RS24460 -0.9 -2.3 hypothetical protein compare
RR42_RS08860 -0.9 -2.8 radical SAM protein compare
RR42_RS13270 -0.9 -4.2 recombination protein RecR compare
RR42_RS05165 -0.9 -1.3 GntR family transcriptional regulator compare
RR42_RS03360 -0.9 -4.0 fructose ABC transporter, ATPase component (FrcA) (from data) compare
RR42_RS03685 -0.9 -1.9 GTP cyclohydrolase compare
RR42_RS17885 -0.9 -3.3 ABC transporter permease compare
RR42_RS31330 -0.9 -1.2 LysR family transcriptional regulator compare
RR42_RS23880 -0.9 -2.0 hypothetical protein compare
RR42_RS17635 -0.9 -2.7 magnesium transporter CorA compare
RR42_RS20205 -0.9 -1.1 chromosome partitioning protein compare
RR42_RS00725 -0.9 -1.7 hypothetical protein compare
RR42_RS12155 -0.8 -2.6 molecular chaperone compare
RR42_RS19695 -0.8 -1.5 cytochrome C protein compare
RR42_RS02250 -0.8 -2.4 GntR family transcriptional regulator compare
RR42_RS15035 -0.8 -3.2 ZIP zinc transporter compare
RR42_RS13065 -0.8 -5.1 ribonuclease R compare
RR42_RS35795 -0.8 -3.6 chemotaxis protein CheR compare
RR42_RS06485 -0.8 -3.7 chorismate synthase compare
RR42_RS07265 -0.8 -2.0 hypothetical protein compare
RR42_RS15090 -0.8 -1.9 DNA helicase compare
RR42_RS19890 -0.8 -3.0 hypothetical protein compare
RR42_RS30765 -0.8 -1.0 tRNA-Arg compare
RR42_RS33595 -0.8 -1.8 hypothetical protein compare
RR42_RS09300 -0.8 -1.3 aromatic ring-opening dioxygenase LigB compare
RR42_RS23635 -0.8 -1.5 flagellar assembly protein FliT compare
RR42_RS06925 -0.8 -1.2 hypothetical protein compare
RR42_RS25455 -0.8 -1.2 acetyl-CoA acetyltransferase compare
RR42_RS37375 -0.8 -1.9 short-chain dehydrogenase compare
RR42_RS09095 -0.8 -3.9 amidase compare
RR42_RS01820 -0.8 -3.7 peptidase S41 compare
RR42_RS02910 -0.8 -4.1 2-aminoadipate aminotransferase compare
RR42_RS22915 -0.8 -3.6 ABC transporter permease compare
RR42_RS10150 -0.8 -1.6 hypothetical protein compare
RR42_RS15975 -0.8 -4.3 formate dehydrogenase compare
RR42_RS23460 -0.8 -1.7 alpha/beta hydrolase compare
RR42_RS26605 -0.8 -3.2 hypothetical protein compare
RR42_RS05955 -0.8 -0.8 hypothetical protein compare
RR42_RS11180 -0.8 -2.7 peptidylprolyl isomerase compare
RR42_RS22935 -0.8 -3.1 metal transporter compare
RR42_RS18670 -0.8 -3.3 metal-dependent hydrolase compare
RR42_RS03250 -0.8 -1.9 MarR family transcriptional regulator compare
RR42_RS03315 -0.8 -2.4 RND transporter MFP subunit compare
RR42_RS32875 -0.8 -2.0 hypothetical protein compare
RR42_RS28620 -0.8 -1.9 ABC transporter compare
RR42_RS19905 -0.8 -3.8 S-adenosylmethionine decarboxylase compare
RR42_RS15825 -0.8 -4.5 capsular biosynthesis protein compare
RR42_RS04880 -0.8 -4.7 coproporphyrinogen III oxidase compare
RR42_RS12250 -0.8 -1.9 sulfate ABC transporter ATP-binding protein compare
RR42_RS18305 -0.7 -1.3 anthranilate phosphoribosyltransferase compare
RR42_RS06245 -0.7 -2.9 SAM-dependent methyltransferase compare
RR42_RS13240 -0.7 -3.1 mannosyltransferase compare
RR42_RS13130 -0.7 -1.3 membrane protein compare
RR42_RS03345 -0.7 -2.5 recombinase XerD compare
RR42_RS01880 -0.7 -3.4 cytochrome oxidase subunit I compare
RR42_RS20570 -0.7 -0.8 biopolymer transporter ExbD compare
RR42_RS09245 -0.7 -1.9 hypothetical protein compare
RR42_RS18815 -0.7 -2.8 cytochrome C compare
RR42_RS15135 -0.7 -2.4 LysR family transcriptional regulator compare
RR42_RS15915 -0.7 -4.0 RNA polymerase subunit sigma-24 compare
RR42_RS37045 -0.7 -1.2 thiamine biosynthesis protein ApbE compare
RR42_RS26105 -0.7 -2.3 C4-dicarboxylate transporter compare
RR42_RS07590 -0.7 -3.1 pseudouridine synthase compare
RR42_RS08970 -0.7 -3.2 XRE family transcriptional regulator compare
RR42_RS13195 -0.7 -4.4 protein-L-isoaspartate O-methyltransferase compare
RR42_RS03310 -0.7 -4.2 multidrug transporter compare
RR42_RS17865 -0.7 -2.6 N-acetyl-anhydromuranmyl-L-alanine amidase compare
RR42_RS32590 -0.7 -1.0 cytochrome o ubiquinol oxidase subunit III compare
RR42_RS23665 -0.7 -5.1 histidine kinase compare
RR42_RS03320 -0.7 -2.3 transcriptional regulator compare
RR42_RS19535 -0.7 -2.0 hypothetical protein compare
RR42_RS13385 -0.7 -3.8 peptide ABC transporter substrate-binding protein compare
RR42_RS05860 -0.7 -2.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS31910 -0.7 -0.8 acyl-CoA dehydrogenase compare
RR42_RS12790 -0.7 -1.9 ACP phosphodiesterase compare
RR42_RS12760 -0.7 -4.3 hypothetical protein compare
RR42_RS06355 -0.7 -2.8 Fe-S cluster assembly protein HesB compare
RR42_RS26050 -0.7 -2.5 hypothetical protein compare
RR42_RS16120 -0.7 -3.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
RR42_RS03170 -0.7 -3.2 hypothetical protein compare
RR42_RS02790 -0.7 -3.1 tryptophanyl-tRNA synthetase compare
RR42_RS31965 -0.7 -2.4 LuxR family transcriptional regulator compare
RR42_RS28720 -0.7 -1.4 hypothetical protein compare
RR42_RS30445 -0.7 -2.7 cation:proton antiporter compare
RR42_RS24795 -0.7 -2.6 butyryl-CoA dehydrogenase compare
RR42_RS31275 -0.7 -4.2 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data) compare
RR42_RS12860 -0.7 -1.2 pseudouridine synthase compare
RR42_RS05375 -0.7 -2.0 hemoglobin-like protein compare
RR42_RS13910 -0.7 -3.3 glutamate racemase compare
RR42_RS17620 -0.7 -2.6 phosphatidylglycerophosphatase compare
RR42_RS31930 -0.7 -2.6 acyl-CoA dehydrogenase compare
RR42_RS03050 -0.7 -1.9 energy transducer TonB compare
RR42_RS13170 -0.7 -4.8 23S rRNA methyltransferase compare
RR42_RS04535 -0.7 -3.0 cysteine synthase compare
RR42_RS00535 -0.7 -4.9 IMP dehydrogenase compare


Specific Phenotypes

None in this experiment

For Cupriavidus basilensis FW507-4G11 in r2a experiments