Experiment set5IT010 for Pseudomonas fluorescens FW300-N2E3

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Carnitine Hydrochloride carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
AO353_07700 -4.5 -5.4 electron transfer flavoprotein subunit alpha conserved
AO353_07745 -4.4 -5.2 NADPH:quinone reductase conserved
AO353_07680 -4.2 -10.1 Rieske (2Fe-2S) protein conserved
AO353_07750 -4.2 -6.4 carnitine 3-dehydrogenase [EC:1.1.1.108] (from data) conserved
AO353_07655 -4.1 -9.5 sarcosine oxidase subunit delta conserved
AO353_07710 -3.8 -15.0 DgcA Dimethylglycine demethylase subunit A (from data) conserved
AO353_07785 -3.8 -8.4 ABC transporter for Carnitine, permease component (from data) conserved
AO353_07705 -3.8 -12.0 DgcB Dimethylglycine demethylase subunit B (EC 1.5.3.-) (from data) conserved
AO353_07715 -3.6 -10.7 hydrocarbon binding protein conserved
AO353_07660 -3.6 -12.2 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming), beta subunit (EC 1.5.3.24) (from data) conserved
AO353_07675 -3.6 -12.9 ferredoxin conserved
AO353_07650 -3.6 -17.3 sarcosine oxidase subunit alpha conserved
AO353_07720 -3.6 -9.0 peptidase M19 conserved
AO353_07735 -3.4 -6.4 AraC family transcriptional regulator conserved
AO353_07770 -3.2 -7.0 AraC family transcriptional regulator conserved
AO353_07740 -3.1 -7.8 ABC transporter for Carnitine, substrate-binding component (from data) conserved
AO353_07665 -3.1 -11.8 Serine hydroxymethyltransferase (EC 2.1.2.1) (from data) conserved
AO353_07780 -3.0 -12.5 Carnitine ABC transporter, substrate-binding component CaiX (from data) conserved
AO353_07755 -3.0 -6.5 betainyl-CoA thiolase (EC 3.1.2.-) (from data) conserved
AO353_07790 -2.9 -6.8 ABC transporter for Carnitine, ATPase component (from data) conserved
AO353_27935 -2.5 -5.3 succinyl-CoA--3-ketoacid-CoA transferase conserved
AO353_27930 -2.5 -6.1 LysR family transcriptional regulator compare
AO353_16880 -2.3 -13.7 potassium transporter Kup conserved
AO353_27940 -2.1 -6.7 succinyl-CoA--3-ketoacid-CoA transferase conserved
AO353_01210 -2.0 -13.1 GntR family transcriptional regulator compare
AO353_05065 -1.7 -6.6 phosphate acetyltransferase conserved
AO353_07340 -1.4 -10.8 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
AO353_16310 -1.4 -7.9 phosphoenolpyruvate carboxylase compare
AO353_03235 -1.4 -6.2 glutamate-pyruvate aminotransferase compare
AO353_11080 -1.4 -8.4 NAD synthetase conserved
AO353_07345 -1.3 -10.1 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
AO353_07335 -1.1 -7.8 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare


Specific phenotypes for carbon source Carnitine Hydrochloride across organisms