Experiment set5IT009 for Bacteroides thetaiotaomicron VPI-5482

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Ammonium chloride nitrogen source

200 most important genes:

  gene name fitness t score description  
BT3918 -5.1 -3.5 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT3193 -4.7 -8.5 putative coenzyme A transferase (NCBI ptt file) compare
BT3757 -4.5 -4.4 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT2837 -4.2 -10.4 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT3759 -4.0 -4.8 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3395 -4.0 -4.8 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT2836 -4.0 -10.6 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT1377 -4.0 -2.7 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT2403 -3.9 -5.4 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT2417 -3.8 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT1843 -3.8 -4.5 adenylosuccinate synthetase (NCBI ptt file) compare
BT2074 -3.8 -7.3 ketol-acid reductoisomerase (NCBI ptt file) compare
BT3549 -3.8 -2.6 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT2078 -3.8 -6.3 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT3761 -3.8 -2.6 N-succinylglutamate synthase (from data) compare
BT3733 -3.8 -6.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT3164 -3.8 -8.4 quinolinate synthetase A (NCBI ptt file) compare
BT2402 -3.7 -7.2 homoserine phosphotransferase HomK (from data) compare
BT1857 -3.7 -3.6 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3760 -3.7 -3.6 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3933 -3.6 -4.9 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1861 -3.6 -2.5 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3184 -3.6 -16.0 L-aspartate oxidase (NCBI ptt file) compare
BT0892 -3.5 -2.4 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3719 -3.5 -3.4 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT2415 -3.5 -7.8 aspartate aminotransferase (NCBI ptt file) compare
BT1746 -3.5 -2.4 conserved hypothetical protein (NCBI ptt file) compare
BT3718 -3.5 -6.6 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT1374 -3.4 -2.4 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1607 -3.4 -3.3 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1859 -3.4 -2.3 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT0202 -3.4 -2.3 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT2401 -3.3 -6.4 threonine synthase (NCBI ptt file) compare
BT3361 -3.3 -6.3 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT1336 -3.2 -3.1 putative translation initiation inhibitor (NCBI ptt file) compare
BT3758 -3.2 -3.1 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT3253 -3.2 -2.2 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1858 -3.1 -3.7 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT0700 -3.1 -3.0 GTP pyrophosphokinase (NCBI ptt file) compare
BT2076 -3.1 -5.5 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT3717 -3.1 -3.0 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT1970 -3.1 -5.8 glutamate dehydrogenase (NCBI ptt file) compare
BT1153 -3.0 -3.0 phosphoserine aminotransferase (NCBI ptt file) compare
BT0530 -3.0 -2.9 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT0891 -3.0 -2.0 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT3394 -2.9 -8.9 putative arginine decarboxylase (NCBI ptt file) compare
BT0528 -2.9 -2.0 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT4211 -2.9 -2.0 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1421 -2.9 -3.9 hypothetical protein (NCBI ptt file) compare
BT1379 -2.9 -2.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT0201 -2.9 -2.0 histidinol dehydrogenase (NCBI ptt file) compare
BT2077 -2.9 -3.9 acetolactate synthase large subunit (NCBI ptt file) compare
BT3936 -2.8 -2.7 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT0203 -2.8 -2.0 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT0532 -2.8 -1.9 anthranilate synthase component I (NCBI ptt file) compare
BT3197 -2.8 -1.9 hypothetical protein (NCBI ptt file) compare
BT2129 -2.7 -3.8 aspartate--ammonia ligase (NCBI ptt file) compare
BT1860 -2.7 -2.6 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT3866 -2.7 -8.6 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT0704 -2.6 -1.9 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT1375 -2.6 -6.3 aspartokinase (NCBI ptt file) compare
BT1844 -2.6 -3.0 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT0185 -2.5 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT0738 -2.5 -2.4 serine hydroxymethyltransferase (NCBI ptt file) compare
BT2027 -2.5 -2.4 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT4612 -2.5 -7.1 conserved hypothetical protein (NCBI ptt file) compare
BT1381 -2.5 -3.8 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT0875 -2.4 -3.3 beta-ureidopropionase (NCBI ptt file) compare
BT3035 -2.4 -11.2 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT1733 -2.4 -1.7 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT1104 -2.4 -1.4 small heat shock protein (NCBI ptt file) compare
BT0200 -2.4 -2.3 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT1127 -2.4 -2.3 mobilization protein BmgB (NCBI ptt file) compare
BT0652 -2.3 -1.9 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) compare
BT1152 -2.3 -1.6 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3320 -2.3 -6.4 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0842 -2.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT0790 -2.2 -2.1 phosphomethylpyrimidine kinase (NCBI ptt file) compare
BT0527 -2.2 -3.0 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0529 -2.2 -1.5 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT2546 -2.1 -5.8 transcriptional regulator (NCBI ptt file) compare
BT0231 -2.1 -1.5 excisionase (NCBI ptt file) compare
BT3980 -2.1 -2.0 hypothetical protein (NCBI ptt file) compare
BT2080 -2.0 -3.6 L-cysteine desulfidase cdsB (from data) compare
BT1979 -2.0 -3.0 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT0876 -2.0 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1576 -1.9 -1.3 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT0778 -1.9 -2.5 conserved hypothetical protein (NCBI ptt file) compare
BT1378 -1.9 -1.8 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT0972 -1.9 -1.8 putative oxidoreductase (NCBI ptt file) compare
BT4466 -1.9 -1.8 hypothetical protein (NCBI ptt file) compare
BT0674 -1.8 -2.2 carboxynorspermidine decarboxylase (NCBI ptt file) compare
BT4046 -1.8 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2142 -1.8 -1.7 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1835 -1.8 -2.9 biotin synthase (NCBI ptt file) compare
BT0776 -1.8 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT1055 -1.8 -2.4 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT1262 -1.8 -1.2 putative transcriptional regulator (NCBI ptt file) compare
BT3882 -1.8 -2.3 putative DNA binding protein (NCBI ptt file) compare
BT1411 -1.7 -2.0 methylated-DNA--protein-cysteine methyltransferase (NCBI ptt file) compare
BT4322 -1.7 -1.7 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT3554 -1.7 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0581 -1.7 -1.9 putative acetyltransferase, GNAT family (NCBI ptt file) compare
BT1148 -1.7 -1.9 putative NADH dehydrogenase/NAD(P)H nitroreductase (NCBI ptt file) compare
BT2843 -1.6 -2.5 integrase (NCBI ptt file) compare
BT2932 -1.6 -1.6 transcriptional regulator (NCBI ptt file) compare
BT4644 -1.6 -2.7 putative anti-sigma factor (NCBI ptt file) compare
BT4562 -1.6 -1.1 hypothetical protein (NCBI ptt file) compare
BT1189 -1.6 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT1608 -1.6 -5.1 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0314 -1.6 -2.4 ribosomal protein L11 methyltransferase (NCBI ptt file) compare
BT1234 -1.6 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT1220 -1.6 -1.1 6-phosphogluconolactonase (NCBI ptt file) compare
BT2003 -1.6 -1.5 putative membrane peptidase (NCBI ptt file) compare
BT4610 -1.6 -1.8 RecA (NCBI ptt file) compare
BT1713 -1.5 -2.1 putative acylneuraminate cytidylyltransferase (NCBI ptt file) compare
BT0533 -1.5 -1.5 tryptophan synthase beta chain (NCBI ptt file) compare
BT1363 -1.5 -1.0 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT4097 -1.5 -1.5 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT1534 -1.5 -1.8 hypothetical protein (NCBI ptt file) compare
BT0882 -1.5 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1066 -1.5 -3.6 hypothetical protein (NCBI ptt file) compare
BT_2008 -1.5 -1.4 hypothetical protein (RefSeq) compare
BT4563 -1.5 -1.4 hypothetical protein (NCBI ptt file) compare
BT4149 -1.5 -2.6 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT4773 -1.5 -2.6 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3920 -1.5 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0015 -1.5 -2.5 rteB, two-component system response regulator (NCBI ptt file) compare
BT2302 -1.5 -1.1 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3845 -1.5 -1.0 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) compare
BT1232 -1.5 -1.7 hypothetical protein (NCBI ptt file) compare
BT3730 -1.4 -1.3 putative regulatory protein (NCBI ptt file) compare
BT0860 -1.4 -1.6 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4666 -1.4 -1.9 putative K+ uptake system protein (NCBI ptt file) compare
BT2845 -1.4 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT3727 -1.4 -3.8 hypothetical protein (NCBI ptt file) compare
BT1594 -1.4 -3.0 putative ferredoxin (NCBI ptt file) compare
BT3935 -1.4 -2.9 aminotransferase (NCBI ptt file) compare
BT3254 -1.4 -5.5 dipeptidyl peptidase IV (NCBI ptt file) compare
BT2122 -1.4 -1.3 lysyl-tRNA synthetase (NCBI ptt file) compare
BT1464 -1.4 -2.0 putative acetyltransferase, (GNAT) family (NCBI ptt file) compare
BT1146 -1.3 -2.0 putative metallo-beta-lactamase (NCBI ptt file) compare
BT0327 -1.3 -1.8 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) (NCBI ptt file) compare
BT0651 -1.3 -1.6 thiamine biosynthesis protein ThiG (NCBI ptt file) compare
BT1444 -1.3 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4421 -1.3 -1.2 conserved hypothetical protein (NCBI ptt file) compare
BT2487 -1.3 -1.6 hypothetical protein (NCBI ptt file) compare
BT1868 -1.3 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0901 -1.3 -2.5 putative universal stress protein UspA (NCBI ptt file) compare
BT4249 -1.3 -0.9 hypothetical protein (NCBI ptt file) compare
BT1972 -1.3 -7.5 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT3268 -1.3 -2.4 glucose-inhibited division protein A (NCBI ptt file) compare
BT0660 -1.3 -2.8 conserved hypothetical protein (NCBI ptt file) compare
BT3812 -1.3 -3.0 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) compare
BT3843 -1.3 -3.0 ATP-dependent Clp protease ATP-binding subunit (NCBI ptt file) compare
BT0769 -1.3 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0151 -1.3 -1.2 hypothetical protein (NCBI ptt file) compare
BT3762 -1.2 -2.4 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT4571 -1.2 -1.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1609 -1.2 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0856 -1.2 -2.7 two-component system response regulator (NCBI ptt file) compare
BT0560 -1.2 -1.6 outer membrane efflux protein (NCBI ptt file) compare
BT2841 -1.2 -2.0 pyruvate kinase (NCBI ptt file) compare
BT0756 -1.2 -1.6 iduronate 2-sulfatase precursor (NCBI ptt file) compare
BT1948 -1.2 -1.7 hypothetical protein (NCBI ptt file) compare
BT1589 -1.2 -1.5 hypothetical protein (NCBI ptt file) compare
BT3894 -1.2 -2.6 putative methyltransferase (NCBI ptt file) compare
BT3260 -1.2 -1.9 DNA polymerase I (NCBI ptt file) compare
BT1976 -1.2 -1.1 hypothetical protein (NCBI ptt file) compare
BT2075 -1.2 -2.8 acyl-ACP thioesterase (NCBI ptt file) compare
BT3213 -1.2 -1.1 tRNA pseudouridine synthase B (NCBI ptt file) compare
BT1747 -1.2 -4.3 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT0922 -1.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT1124 -1.2 -2.6 putative integrase (NCBI ptt file) compare
BT1194 -1.2 -2.7 outer membrane protein, OmpA family (NCBI ptt file) compare
BT1442 -1.2 -3.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI ptt file) compare
BT0517 -1.2 -2.9 flavodoxin (NCBI ptt file) compare
BT1172 -1.1 -2.7 DNA primase/helicase (NCBI ptt file) compare
BT1380 -1.1 -1.3 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT4258 -1.1 -3.4 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT0073 -1.1 -2.7 putative ABC transporter, ATP-binding protein (NCBI ptt file) compare
BT2169 -1.1 -2.9 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2299 -1.1 -1.3 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0376 -1.1 -1.2 putative transcriptional regulator (NCBI ptt file) compare
BT0321 -1.1 -1.7 cytidine/deoxycytidylate deaminase (NCBI ptt file) compare
BT1912 -1.1 -1.5 hypothetical protein (NCBI ptt file) compare
BT4265 -1.1 -1.5 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0124 -1.1 -2.7 NADH:ubiquinone oxidoreductase subunit (NCBI ptt file) compare
BT2208 -1.1 -2.8 hypothetical protein (NCBI ptt file) compare
BT0619 -1.1 -0.7 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfD (NCBI ptt file) compare
BT2589 -1.1 -3.6 type I restriction enzyme, M subunit (NCBI ptt file) compare
BT1270 -1.1 -3.6 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1446 -1.1 -4.1 dethiobiotin synthetase (NCBI ptt file) compare
BT2844 -1.1 -4.4 conserved hypothetical protein (NCBI ptt file) compare
BT0543 -1.1 -2.5 glutamine synthetase (NCBI ptt file) compare
BT3912 -1.1 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT0081 -1.1 -1.8 hypothetical protein (NCBI ptt file) compare
BT0322 -1.1 -1.7 putative oxidoreductase (NCBI ptt file) compare
BT4561 -1.1 -2.6 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT1340 -1.1 -3.3 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Ammonium chloride in Bacteroides thetaiotaomicron VPI-5482

For nitrogen source Ammonium chloride across organisms