Experiment set5IT007 for Dechlorosoma suillum PS

Compare to:

ALP with sodium fluoride 30 mM

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -7.6 -9.8 phosphotransferase system HPr (HPr) family protein compare
Dsui_0742 -5.7 -15.3 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -5.5 -7.5 putative permease compare
Dsui_1367 -5.3 -6.6 crcB protein conserved
Dsui_2816 -4.3 -5.8 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3139 -4.2 -4.0 outer membrane assembly lipoprotein YfgL compare
Dsui_2651 -3.5 -2.0 ankyrin repeat-containing protein compare
Dsui_1529 -3.2 -7.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3524 -3.0 -10.6 signal transduction histidine kinase compare
Dsui_2189 -2.9 -3.4 acyl-CoA synthetase (NDP forming) compare
Dsui_3127 -2.9 -2.3 23S RNA-specific pseudouridylate synthase compare
Dsui_1855 -2.9 -1.9 hypothetical protein compare
Dsui_1577 -2.9 -3.0 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2805 -2.9 -2.3 EamA-like transporter family compare
Dsui_1000 -2.8 -1.9 hypothetical protein compare
Dsui_2717 -2.7 -4.7 RNA polymerase-binding protein DksA compare
Dsui_1978 -2.7 -2.8 putative lipoprotein compare
Dsui_2970 -2.6 -2.4 putative Fe-S oxidoreductase compare
Dsui_3523 -2.6 -8.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2667 -2.6 -1.7 acetyltransferase compare
Dsui_2321 -2.6 -1.7 site-specific recombinase compare
Dsui_0297 -2.5 -1.7 sugar fermentation stimulation protein compare
Dsui_3272 -2.5 -1.7 putative threonine efflux protein compare
Dsui_3392 -2.5 -10.8 carboxylate-amine ligase, YbdK family compare
Dsui_0520 -2.5 -10.9 transcriptional regulator compare
Dsui_2342 -2.5 -1.7 multidrug resistance efflux pump compare
Dsui_1970 -2.5 -8.8 metalloendopeptidase-like membrane protein compare
Dsui_3007 -2.5 -0.8 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1401 -2.5 -7.9 surface lipoprotein compare
Dsui_3171 -2.5 -1.6 putative protein-disulfide isomerase compare
Dsui_3240 -2.5 -9.3 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_2033 -2.5 -1.7 transcriptional regulator compare
Dsui_3179 -2.4 -1.7 signal transduction histidine kinase compare
Dsui_2327 -2.4 -2.0 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_0313 -2.4 -1.6 putative transcriptional regulator compare
Dsui_0958 -2.4 -1.6 ferredoxin compare
Dsui_3527 -2.4 -0.8 ketol-acid reductoisomerase compare
Dsui_1851 -2.4 -1.6 signal transduction histidine kinase compare
Dsui_2424 -2.4 -0.8 hypothetical protein compare
Dsui_0200 -2.3 -1.5 hypothetical protein compare
Dsui_2032 -2.3 -1.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2238 -2.3 -2.2 ABC-type dipeptide transport system, periplasmic component compare
Dsui_1620 -2.3 -1.5 PAP2 (acid phosphatase) superfamily protein compare
Dsui_1165 -2.3 -1.5 Ni,Fe-hydrogenase I large subunit compare
Dsui_2775 -2.3 -2.6 hypothetical protein compare
Dsui_2740 -2.2 -1.5 putative integral membrane protein compare
Dsui_1403 -2.2 -2.5 putative NTP binding protein (contains STAS domain) compare
Dsui_1398 -2.2 -6.7 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1955 -2.2 -5.3 3'-5' exonuclease compare
Dsui_0620 -2.2 -2.5 Fe2+-dicitrate sensor, membrane component compare
Dsui_1576 -2.2 -2.5 dihydrolipoamide dehydrogenase compare
Dsui_1659 -2.2 -1.5 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2123 -2.2 -1.2 EAL domain-containing protein compare
Dsui_0174 -2.1 -1.4 hypothetical protein compare
Dsui_0515 -2.1 -1.2 hypothetical protein compare
Dsui_0209 -2.1 -1.4 hypothetical protein compare
Dsui_1610 -2.1 -1.4 Protein of unknown function (DUF3079) compare
Dsui_0865 -2.1 -2.0 hypothetical protein compare
Dsui_0838 -2.1 -2.0 hypothetical protein compare
Dsui_3352 -2.1 -1.4 cAMP-binding protein compare
Dsui_1819 -2.1 -1.0 4-oxalocrotonate tautomerase family enzyme compare
Dsui_3298 -2.1 -16.0 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1839 -2.1 -1.3 hypothetical protein compare
Dsui_3226 -2.1 -1.4 putative SAM-dependent methyltransferase compare
Dsui_1402 -2.1 -4.3 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0418 -2.1 -1.4 putative Na+-dependent transporter compare
Dsui_0553 -2.0 -1.3 putative nitrogen fixation protein compare
Dsui_1668 -2.0 -1.9 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase compare
Dsui_2389 -2.0 -1.4 putative membrane protein compare
Dsui_2921 -2.0 -2.3 isochorismate synthase family protein compare
Dsui_0252 -2.0 -1.1 TIGR00252 family protein compare
Dsui_3478 -2.0 -0.9 hypothetical protein compare
Dsui_0105 -2.0 -2.9 NAD-dependent aldehyde dehydrogenase compare
Dsui_2329 -2.0 -1.3 putative dehydrogenase compare
Dsui_1674 -2.0 -1.3 EAL domain-containing protein compare
Dsui_1817 -2.0 -1.3 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_2272 -2.0 -1.3 hypothetical protein compare
Dsui_0870 -2.0 -11.8 putative membrane protein compare
Dsui_1370 -1.9 -1.3 putative permease, DMT superfamily compare
Dsui_2330 -1.9 -1.3 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3426 -1.9 -1.3 transcriptional regulator compare
Dsui_0412 -1.9 -1.3 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_3377 -1.9 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_3231 -1.9 -1.3 hypothetical protein compare
Dsui_0003 -1.9 -4.9 putative Zn-dependent protease compare
Dsui_0431 -1.9 -2.5 putative permease, DMT superfamily compare
Dsui_1852 -1.9 -1.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0966 -1.9 -2.5 methyl-accepting chemotaxis protein compare
Dsui_0878 -1.9 -1.3 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_1242 -1.9 -1.8 hypothetical protein compare
Dsui_0653 -1.9 -1.3 putative SAM-dependent methyltransferase compare
Dsui_3118 -1.9 -1.3 polyferredoxin compare
Dsui_2290 -1.9 -1.3 putative paraquat-inducible protein A compare
Dsui_1360 -1.9 -1.3 hypothetical protein compare
Dsui_3366 -1.9 -1.3 glycerophosphoryl diester phosphodiesterase compare
Dsui_2237 -1.9 -2.2 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_0778 -1.9 -3.0 small protein A (tmRNA-binding) compare
Dsui_1198 -1.9 -5.8 apolipoprotein N-acyltransferase compare
Dsui_0945 -1.9 -1.0 Iron-sulfur cluster assembly accessory protein compare
Dsui_3393 -1.9 -5.1 Kef-type K+ transport system, membrane component compare
Dsui_0734 -1.9 -1.1 acetyltransferase compare
Dsui_2895 -1.9 -1.7 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1702 -1.8 -1.2 TonB family protein compare
Dsui_0533 -1.8 -1.7 cobyrinic acid a,c-diamide synthase compare
Dsui_1045 -1.8 -1.2 hypothetical protein compare
Dsui_0393 -1.8 -1.2 glycosyltransferase compare
Dsui_1396 -1.8 -1.2 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_3026 -1.8 -1.0 hydrogenase maturation protease compare
Dsui_3448 -1.8 -1.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0558 -1.8 -1.7 tetratricopeptide repeat protein compare
Dsui_0039 -1.8 -4.0 dimethyladenosine transferase compare
Dsui_0022 -1.8 -1.7 hypothetical protein compare
Dsui_3006 -1.8 -0.8 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_1893 -1.8 -1.0 putative membrane protein compare
Dsui_3077 -1.8 -1.2 hypothetical protein compare
Dsui_0271 -1.8 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0557 -1.8 -1.2 NifQ compare
Dsui_1149 -1.8 -1.2 Zn-dependent protease with chaperone function compare
Dsui_1600 -1.8 -12.0 putative enzyme of heme biosynthesis compare
Dsui_2920 -1.8 -1.9 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_3178 -1.8 -1.2 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_0871 -1.8 -0.6 hypothetical protein compare
Dsui_3008 -1.8 -1.2 hydrogenase expression/formation protein compare
Dsui_3274 -1.8 -1.7 dihydrodipicolinate reductase compare
Dsui_1974 -1.8 -1.2 hypothetical protein compare
Dsui_1599 -1.8 -10.9 putative enzyme of heme biosynthesis compare
Dsui_1879 -1.8 -1.2 luciferase family oxidoreductase, group 1 compare
Dsui_3158 -1.8 -4.3 Na+/H+ dicarboxylate symporter compare
Dsui_2991 -1.8 -3.0 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0763 -1.8 -1.2 ammonium transporter compare
Dsui_2341 -1.8 -1.2 ABC-type multidrug transport system, ATPase component compare
Dsui_3408 -1.8 -1.7 hypothetical protein compare
Dsui_3257 -1.7 -1.7 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_2935 -1.7 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1669 -1.7 -1.1 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_2085 -1.7 -1.2 NADPH-dependent FMN reductase compare
Dsui_1553 -1.7 -1.3 regulator of competence-specific genes compare
Dsui_1105 -1.7 -1.7 methylmalonyl-CoA mutase family protein compare
Dsui_0015 -1.7 -1.1 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_1002 -1.7 -1.3 prolyl oligopeptidase family protein compare
Dsui_1140 -1.7 -1.6 arabinose efflux permease family protein compare
Dsui_0846 -1.7 -3.6 glucose-inhibited division protein A compare
Dsui_0157 -1.7 -1.6 sulfite oxidase-like oxidoreductase compare
Dsui_3351 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_1888 -1.7 -1.1 putative domain HDIG-containing protein compare
Dsui_3271 -1.7 -1.2 ATP-dependent protease Clp, ATPase subunit compare
Dsui_0107 -1.7 -1.6 PDZ domain-containing protein compare
Dsui_2893 -1.7 -2.5 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1833 -1.7 -1.1 nitrate transport ATP-binding subunits C and D compare
Dsui_1670 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_0654 -1.7 -1.1 hypothetical protein compare
Dsui_0171 -1.7 -1.1 putative transcriptional regulator compare
Dsui_3220 -1.7 -2.3 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0618 -1.7 -1.1 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_3126 -1.7 -1.1 heme d1 biosynthesis radical SAM protein NirJ compare
Dsui_3109 -1.7 -1.1 cytochrome c, mono- and diheme variants family compare
Dsui_0573 -1.7 -0.8 ferredoxin-like protein compare
Dsui_1442 -1.6 -1.1 putative efflux protein, MATE family compare
Dsui_1615 -1.6 -0.9 hypothetical protein compare
Dsui_3520 -1.6 -13.7 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1388 -1.6 -1.1 hypothetical protein compare
Dsui_2866 -1.6 -1.1 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3150 -1.6 -1.1 electron transfer flavoprotein, beta subunit compare
Dsui_0215 -1.6 -0.9 hypothetical protein compare
Dsui_3278 -1.6 -2.6 molybdenum cofactor biosynthesis protein A compare
Dsui_2819 -1.6 -1.1 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_0881 -1.6 -1.1 cAMP-binding protein compare
Dsui_0028 -1.6 -1.1 putative effector of murein hydrolase compare
Dsui_0949 -1.6 -1.2 hypothetical protein compare
Dsui_0308 -1.6 -2.3 Major Facilitator Superfamily transporter compare
Dsui_1733 -1.6 -1.1 flagellar basal-body rod protein FlgC compare
Dsui_0513 -1.6 -2.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0225 -1.6 -1.1 hypothetical protein compare
Dsui_1739 -1.6 -1.1 flagellar basal-body P-ring protein compare
Dsui_0279 -1.6 -1.5 K+-transporting ATPase, KdpA compare
Dsui_2610 -1.6 -1.1 single-stranded DNA-binding protein compare
Dsui_1734 -1.6 -1.1 flagellar hook capping protein compare
Dsui_0955 -1.6 -1.1 nitrogenase iron protein compare
Dsui_1111 -1.6 -1.1 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_1353 -1.6 -1.1 flagellar capping protein compare
Dsui_3210 -1.6 -1.8 hypothetical protein compare
Dsui_2079 -1.6 -1.8 histidine kinase compare
Dsui_1825 -1.6 -1.1 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_0567 -1.6 -0.7 molybdenum-pterin binding domain protein compare
Dsui_2732 -1.6 -1.5 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_0940 -1.6 -1.5 Nif-specific regulatory protein compare
Dsui_0571 -1.6 -1.5 ferredoxin compare
Dsui_1759 -1.6 -5.2 flagellar hook-basal body complex protein FliE compare
Dsui_3156 -1.6 -1.0 putative permease compare
Dsui_0175 -1.6 -1.0 hypothetical protein compare
Dsui_2228 -1.6 -1.1 Zn-dependent alcohol dehydrogenase compare
Dsui_2933 -1.6 -1.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0032 -1.6 -1.0 NAD-dependent protein deacetylase, SIR2 family compare
Dsui_1399 -1.6 -7.0 conserved hypothetical integral membrane protein compare
Dsui_0509 -1.6 -2.7 MauM/NapG family ferredoxin-type protein compare
Dsui_2081 -1.5 -2.5 transcriptional regulator with HTH domain and aminotransferase domain compare
Dsui_2668 -1.5 -1.0 putative phosphatase compare
Dsui_2489 -1.5 -1.0 polyhydroxyalkanoate depolymerase, intracellular compare
Dsui_2599 -1.5 -0.8 hypothetical protein compare
Dsui_1701 -1.5 -1.0 restriction endonuclease compare


Specific Phenotypes

For 1 genes in this experiment

For stress sodium fluoride in Dechlorosoma suillum PS

For stress sodium fluoride across organisms