Experiment set5IT006 for Methanococcus maripaludis S2

Compare to:

Formate with iodate 3.125 mM

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS00300 +1.5 1.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS02340 +1.4 2.2 DNA-directed RNA polymerase subunit E'' compare
MMP_RS03205 +1.4 2.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08720 +1.2 1.7 4Fe-4S binding protein compare
MMP_RS00450 +1.2 1.1 4Fe-4S binding protein compare
MMP_RS07605 +1.0 2.4 diadenylate cyclase compare
MMP_RS06130 +0.8 2.1 peptidylprolyl isomerase compare
MMP_RS06315 +0.8 1.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08315 +0.8 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS01775 +0.8 1.9 TIGR00297 family protein compare
MMP_RS08785 +0.7 1.1 RNA-protein complex protein Nop10 compare
MMP_RS08440 +0.7 1.7 cell division protein SepF compare
MMP_RS01525 +0.7 1.8 nucleoside-diphosphate kinase compare
MMP_RS04265 +0.7 2.7 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00900 +0.6 1.8 50S ribosomal protein L39e compare
MMP_RS01075 +0.6 0.6 hypothetical protein compare
MMP_RS00520 +0.6 1.4 RNA polymerase Rpb4 family protein compare
MMP_RS07005 +0.6 0.5 4Fe-4S binding protein compare
MMP_RS02355 +0.6 2.2 30S ribosomal protein S27ae compare
MMP_RS04015 +0.6 1.8 hypothetical protein compare
MMP_RS05020 +0.6 2.0 hypothetical protein compare
MMP_RS05920 +0.6 0.6 50S ribosomal protein L37e compare
MMP_RS03700 +0.6 2.6 sodium:proton antiporter compare
MMP_RS04585 +0.6 3.5 AIR synthase related protein compare
MMP_RS08940 +0.6 1.0 MetS family NSS transporter small subunit compare
MMP_RS07630 +0.5 0.7 ATP-binding cassette domain-containing protein compare
MMP_RS02110 +0.5 1.5 hypothetical protein compare
MMP_RS01220 +0.5 2.7 hypothetical protein compare
MMP_RS07875 +0.5 2.2 hypothetical protein compare
MMP_RS06630 +0.5 0.7 UPF0058 family protein compare
MMP_RS01335 +0.5 1.0 prefoldin subunit beta compare
MMP_RS00665 +0.5 2.2 hypothetical protein compare
MMP_RS07820 +0.5 2.3 UPF0104 family protein compare
MMP_RS06230 +0.5 0.8 helix-turn-helix domain-containing protein compare
MMP_RS05085 +0.5 2.2 AAA family ATPase compare
MMP_RS03535 +0.5 1.3 helix-turn-helix transcriptional regulator compare
MMP_RS06925 +0.5 1.4 ribonuclease VapC4 compare
MMP_RS03800 +0.5 1.4 hypothetical protein compare
MMP_RS05795 +0.5 1.9 redox-regulated ATPase YchF compare
MMP_RS05250 +0.5 0.9 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01840 +0.5 2.5 TIGR00289 family protein compare
MMP_RS08580 +0.5 1.6 flagellin compare
MMP_RS00535 +0.5 1.9 TIGR00375 family protein compare
MMP_RS06855 +0.5 2.9 hypothetical protein compare
MMP_RS04890 +0.4 0.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS00895 +0.4 1.0 hypothetical protein compare
MMP_RS03145 +0.4 2.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00825 +0.4 1.7 fumarylacetoacetate hydrolase family protein compare
MMP_RS01365 +0.4 1.7 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01165 +0.4 1.8 DUF434 domain-containing protein compare
MMP_RS00560 +0.4 3.3 cation:proton antiporter compare
MMP_RS02190 +0.4 1.4 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00660 +0.4 2.3 alkaline phosphatase family protein compare
MMP_RS01250 +0.4 2.2 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07130 +0.4 3.3 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01545 +0.4 0.4 CBS domain-containing protein compare
MMP_RS05845 +0.4 0.8 tRNA-intron lyase compare
MMP_RS01610 +0.4 1.4 hypothetical protein compare
MMP_RS03785 +0.4 1.5 cupin domain-containing protein compare
MMP_RS05525 +0.4 2.0 calcium/sodium antiporter compare
MMP_RS08215 +0.4 1.5 DUF483 domain-containing protein compare
MMP_RS03680 +0.4 2.1 hypothetical protein compare
MMP_RS01420 +0.4 1.0 hypothetical protein compare
MMP_RS06975 +0.4 0.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS05715 +0.4 1.5 hypothetical protein compare
MMP_RS03820 +0.4 1.8 EamA family transporter compare
MMP_RS05365 +0.4 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08445 +0.4 1.3 DUF2099 family protein compare
MMP_RS05415 +0.4 1.0 DUF22 domain-containing protein compare
MMP_RS04775 +0.4 1.2 adenosylhomocysteinase compare
MMP_RS08855 +0.3 2.3 hypothetical protein compare
MMP_RS04520 +0.3 0.8 nucleoside deaminase compare
MMP_RS01515 +0.3 2.0 PINc/VapC family ATPase compare
MMP_RS07420 +0.3 1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08070 +0.3 2.1 DUF2096 domain-containing protein compare
MMP_RS06895 +0.3 0.7 selenocysteine-specific translation elongation factor compare
MMP_RS00740 +0.3 1.3 cyclase family protein compare
MMP_RS06885 +0.3 0.8 50S ribosome-binding GTPase compare
MMP_RS01540 +0.3 0.9 DUF504 domain-containing protein compare
MMP_RS00305 +0.3 0.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS06980 +0.3 1.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04815 +0.3 2.0 chemotaxis protein CheD compare
MMP_RS02800 +0.3 1.3 nucleotidyltransferase domain-containing protein compare
MMP_RS06280 +0.3 1.6 alpha-glucan family phosphorylase compare
MMP_RS01605 +0.3 1.9 hypothetical protein compare
MMP_RS01805 +0.3 1.4 NUDIX hydrolase compare
MMP_RS03990 +0.3 1.7 recombinase family protein compare
MMP_RS09035 +0.3 0.6 hypothetical protein compare
MMP_RS00695 +0.3 0.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06170 +0.3 2.3 ABC transporter ATP-binding protein compare
MMP_RS05940 +0.3 1.1 corrinoid protein compare
MMP_RS08645 +0.3 1.1 UPF0179 family protein compare
MMP_RS06480 +0.3 2.1 ABC transporter substrate-binding protein compare
MMP_RS07445 +0.3 1.8 helix-turn-helix domain-containing protein compare
MMP_RS00060 +0.3 0.5 3-dehydroquinate synthase II compare
MMP_RS07540 +0.3 1.5 CBS domain-containing protein compare
MMP_RS00945 +0.3 0.4 PadR family transcriptional regulator compare
MMP_RS04800 +0.3 1.9 chemotaxis protein CheW compare
MMP_RS01180 +0.3 0.8 XTP/dITP diphosphatase compare
MMP_RS07180 +0.3 1.4 DEAD/DEAH box helicase compare
MMP_RS01655 +0.3 1.1 DsrE family protein compare
MMP_RS06460 +0.3 1.1 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS04695 +0.3 1.2 selenide water dikinase SelD compare
MMP_RS06000 +0.3 0.9 divalent-cation tolerance protein CutA compare
MMP_RS06900 +0.3 1.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02590 +0.3 1.5 low molecular weight phosphatase family protein compare
MMP_RS03910 +0.3 0.4 hypothetical protein compare
MMP_RS01755 +0.3 0.5 DUF2097 domain-containing protein compare
MMP_RS07345 +0.3 1.2 glycine synthesis protein GlyXL (from data) compare
MMP_RS05660 +0.3 1.5 phosphate ABC transporter substrate-binding protein compare
MMP_RS08775 +0.3 1.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS07095 +0.3 0.6 PspC domain-containing protein compare
MMP_RS05150 +0.3 1.1 hypothetical protein compare
MMP_RS02085 +0.3 1.6 inosine/xanthosine triphosphatase compare
MMP_RS04995 +0.3 1.9 hypothetical protein compare
MMP_RS08705 +0.3 1.8 sulfopyruvate decarboxylase subunit beta compare
MMP_RS04710 +0.3 0.5 hypothetical protein compare
MMP_RS00545 +0.3 0.9 XRE family transcriptional regulator compare
MMP_RS04215 +0.3 1.7 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05810 +0.3 1.5 archaeosortase family protein ArtE compare
MMP_RS01045 +0.3 1.5 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS05355 +0.3 0.3 hypothetical protein compare
MMP_RS06555 +0.3 0.8 cupin domain-containing protein compare
MMP_RS00770 +0.3 1.2 hypothetical protein compare
MMP_RS03140 +0.3 1.7 hypothetical protein compare
MMP_RS02680 +0.3 1.5 ABC transporter permease compare
MMP_RS02225 +0.3 1.1 carbohydrate kinase family protein compare
MMP_RS05900 +0.3 1.5 tetratricopeptide repeat protein compare
MMP_RS09025 +0.3 0.4 hypothetical protein compare
MMP_RS00735 +0.2 1.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS01700 +0.2 0.3 dihydroxy-acid dehydratase compare
MMP_RS09050 +0.2 1.2 CAP domain-containing protein compare
MMP_RS07775 +0.2 1.4 alanine dehydrogenase compare
MMP_RS03755 +0.2 1.6 MarR family transcriptional regulator compare
MMP_RS06650 +0.2 1.4 glycoside hydrolase family 57 protein compare
MMP_RS00335 +0.2 1.1 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS05245 +0.2 1.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06275 +0.2 1.8 ATP-dependent DNA helicase compare
MMP_RS05820 +0.2 1.4 RNA-binding transcriptional accessory protein compare
MMP_RS06720 +0.2 1.3 response regulator transcription factor compare
MMP_RS06100 +0.2 1.4 GNAT family N-acetyltransferase compare
MMP_RS01435 +0.2 1.3 DMT family transporter compare
MMP_RS08650 +0.2 0.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06475 +0.2 0.8 FAD-dependent oxidoreductase compare
MMP_RS06095 +0.2 1.4 ABC transporter ATP-binding protein compare
MMP_RS04790 +0.2 1.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS05675 +0.2 0.8 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS02415 +0.2 0.7 site-specific integrase compare
MMP_RS06430 +0.2 1.5 6-carboxytetrahydropterin synthase QueD compare
MMP_RS07805 +0.2 1.6 ABC transporter permease compare
MMP_RS06500 +0.2 1.2 ATP-binding protein compare
MMP_RS05980 +0.2 1.5 ferritin compare
MMP_RS05835 +0.2 0.3 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS05910 +0.2 1.0 cell division ATPase MinD compare
MMP_RS00295 +0.2 0.6 gamma carbonic anhydrase family protein compare
MMP_RS03035 +0.2 0.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02815 +0.2 0.5 hypothetical protein compare
MMP_RS06915 +0.2 1.2 metallophosphoesterase compare
MMP_RS07125 +0.2 0.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06060 +0.2 1.1 hypothetical protein compare
MMP_RS03100 +0.2 1.0 hypothetical protein compare
MMP_RS00940 +0.2 1.4 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS03900 +0.2 1.3 minichromosome maintenance protein MCM compare
MMP_RS00390 +0.2 1.4 ammonium transporter compare
MMP_RS01320 +0.2 0.7 hypothetical protein compare
MMP_RS04650 +0.2 1.1 tetratricopeptide repeat protein compare
MMP_RS00150 +0.2 1.1 AAA family ATPase compare
MMP_RS00310 +0.2 1.2 CBS domain-containing protein compare
MMP_RS01185 +0.2 1.0 hypothetical protein compare
MMP_RS08625 +0.2 1.4 type II/IV secretion system ATPase subunit compare
MMP_RS02100 +0.2 0.9 metallophosphoesterase compare
MMP_RS00325 +0.2 0.4 RNA-binding protein compare
MMP_RS07860 +0.2 0.2 hypothetical protein compare
MMP_RS04310 +0.2 0.8 hypothetical protein compare
MMP_RS01445 +0.2 0.7 hypothetical protein compare
MMP_RS00635 +0.2 0.9 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS01485 +0.2 1.5 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS02710 +0.2 1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03350 +0.2 0.9 winged helix-turn-helix domain-containing protein compare
MMP_RS03740 +0.2 1.0 indolepyruvate oxidoreductase subunit beta compare
MMP_RS03250 +0.2 0.7 MJ1244 family protein compare
MMP_RS05985 +0.2 0.9 hypothetical protein compare
MMP_RS08075 +0.2 0.8 DUF749 domain-containing protein compare
MMP_RS06910 +0.2 1.2 RlmF-related methyltransferase compare
MMP_RS01145 +0.2 1.4 ABC transporter ATP-binding protein compare
MMP_RS09010 +0.2 1.1 hypothetical protein compare
MMP_RS07790 +0.2 1.0 segregation/condensation protein A compare
MMP_RS06165 +0.2 1.3 ABC transporter permease compare
MMP_RS01865 +0.2 0.4 GPR1/FUN34/YaaH family transporter compare
MMP_RS03115 +0.2 1.4 hypothetical protein compare
MMP_RS07960 +0.2 1.0 sugar phosphate isomerase/epimerase compare
MMP_RS06270 +0.2 0.9 TIGR00300 family protein compare
MMP_RS07525 +0.2 1.1 4Fe-4S binding protein compare
MMP_RS04035 +0.2 0.2 hypothetical protein compare
MMP_RS05505 +0.2 1.1 class IV adenylate cyclase compare
MMP_RS05235 +0.2 1.4 exodeoxyribonuclease III compare
MMP_RS00710 +0.2 0.8 hypothetical protein compare
MMP_RS00730 +0.2 1.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS04825 +0.2 1.2 protein-glutamate O-methyltransferase CheR compare
MMP_RS05815 +0.2 0.4 NOL1/NOP2/sun family putative RNA methylase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress sodium iodate across organisms