Experiment set5IT003 for Klebsiella michiganensis M5al

Compare to:

Sodium D-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS04160 -7.7 -6.4 phosphoserine phosphatase compare
BWI76_RS04250 -6.5 -7.7 homoserine kinase compare
BWI76_RS09755 -5.7 -9.5 phosphoserine transaminase compare
BWI76_RS20965 -5.7 -4.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS01655 -5.6 -8.6 homoserine O-succinyltransferase compare
BWI76_RS26085 -5.5 -3.8 3-dehydroquinate synthase compare
BWI76_RS18950 -5.4 -4.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04465 -5.4 -5.2 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05840 -5.3 -6.3 glutamate 5-kinase compare
BWI76_RS00850 -5.2 -11.4 acetylglutamate kinase compare
BWI76_RS18930 -5.2 -4.5 histidinol-phosphate transaminase compare
BWI76_RS20270 -5.2 -7.6 hypothetical protein compare
BWI76_RS04670 -5.1 -10.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00980 -5.1 -11.6 PLP-dependent threonine dehydratase compare
BWI76_RS04645 -5.0 -5.6 3-dehydroquinase compare
BWI76_RS00855 -5.0 -9.0 argininosuccinate lyase compare
BWI76_RS09645 -5.0 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS04685 -4.9 -12.6 putative leucine operon leader peptide compare
BWI76_RS00965 -4.8 -2.1 acetolactate synthase 2 small subunit compare
BWI76_RS04245 -4.8 -16.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS05835 -4.8 -4.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS00990 -4.7 -10.6 ketol-acid reductoisomerase compare
BWI76_RS09760 -4.7 -6.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23920 -4.7 -4.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS23220 -4.7 -10.0 amino-acid N-acetyltransferase compare
BWI76_RS04470 -4.7 -11.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS08405 -4.7 -4.5 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS18925 -4.7 -7.0 histidinol dehydrogenase compare
BWI76_RS01615 -4.6 -12.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS20895 -4.5 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11965 -4.5 -6.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00845 -4.4 -7.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04255 -4.4 -10.1 threonine synthase compare
BWI76_RS19515 -4.3 -5.9 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) conserved
BWI76_RS18940 -4.3 -5.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00835 -4.3 -11.5 phosphoenolpyruvate carboxylase compare
BWI76_RS11840 -4.3 -5.8 tryptophan synthase subunit alpha compare
BWI76_RS18920 -4.3 -4.4 ATP phosphoribosyltransferase compare
BWI76_RS09910 -4.2 -17.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11860 -4.2 -9.6 anthranilate synthase component I compare
BWI76_RS25420 -4.2 -7.4 malate dehydrogenase compare
BWI76_RS25115 -4.2 -6.7 argininosuccinate synthase compare
BWI76_RS23360 -4.1 -4.7 diaminopimelate decarboxylase compare
BWI76_RS21265 -4.1 -10.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS18935 -4.1 -7.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS02995 -4.1 -9.9 aspartate carbamoyltransferase compare
BWI76_RS00785 -4.0 -7.2 cystathionine gamma-synthase compare
BWI76_RS07070 -4.0 -5.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21465 -4.0 -3.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS20350 -4.0 -6.9 amidophosphoribosyltransferase compare
BWI76_RS22760 -4.0 -10.5 sulfite reductase subunit beta compare
BWI76_RS08395 -3.9 -2.9 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS04665 -3.9 -19.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04675 -3.9 -7.0 3-isopropylmalate dehydrogenase compare
BWI76_RS09660 -3.9 -2.6 DNA translocase FtsK compare
BWI76_RS21475 -3.9 -5.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS15825 -3.8 -3.6 hypothetical protein compare
BWI76_RS00805 -3.8 -5.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11850 -3.8 -7.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS20355 -3.7 -2.6 colicin V production protein compare
BWI76_RS04680 -3.7 -11.4 2-isopropylmalate synthase compare
BWI76_RS23365 -3.7 -8.1 LysR family transcriptional regulator compare
BWI76_RS22765 -3.7 -13.2 sulfite reductase subunit alpha compare
BWI76_RS18955 -3.6 -4.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS22755 -3.6 -9.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS03010 -3.5 -11.7 ornithine carbamoyltransferase compare
BWI76_RS00400 -3.5 -2.3 glutamine synthetase compare
BWI76_RS27185 -3.5 -15.2 L-lactate/D-lactate permease (from data) conserved
BWI76_RS04705 -3.4 -7.6 DNA-binding transcriptional regulator FruR compare
BWI76_RS00975 -3.4 -5.5 dihydroxy-acid dehydratase compare
BWI76_RS02815 -3.4 -2.9 fructose-bisphosphatase class I compare
BWI76_RS23230 -3.4 -2.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS01210 -3.3 -4.0 tyrosine recombinase XerC compare
BWI76_RS03080 -3.3 -4.0 (Fe-S)-cluster assembly protein compare
BWI76_RS27385 -3.3 -7.9 orotate phosphoribosyltransferase compare
BWI76_RS01185 -3.3 -2.3 adenylate cyclase compare
BWI76_RS27170 -3.3 -8.3 MltR family transcriptional regulator compare
BWI76_RS10990 -3.2 -3.8 dihydroorotase compare
BWI76_RS02530 -3.2 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS20180 -3.2 -7.2 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS08385 -3.2 -2.7 citrate (Si)-synthase compare
BWI76_RS07065 -3.1 -9.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18605 -3.1 -3.0 oxidoreductase molybdopterin-binding protein compare
BWI76_RS05200 -3.1 -3.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS08210 -3.0 -2.3 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS11855 -3.0 -9.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS20170 -3.0 -5.3 NADH-quinone oxidoreductase subunit F compare
BWI76_RS04510 -3.0 -2.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS23240 -3.0 -4.0 exonuclease V subunit gamma compare
BWI76_RS20640 -2.9 -6.1 cysteine synthase A compare
BWI76_RS24285 -2.9 -6.7 cystathionine beta-lyase compare
BWI76_RS20160 -2.9 -2.7 NADH-quinone oxidoreductase subunit H compare
BWI76_RS01610 -2.9 -6.1 phosphoribosylamine--glycine ligase compare
BWI76_RS25425 -2.8 -2.3 arginine repressor compare
BWI76_RS20135 -2.8 -7.0 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20435 -2.8 -2.3 chorismate synthase compare
BWI76_RS19605 -2.8 -5.4 CidB/LrgB family autolysis modulator conserved
BWI76_RS27475 -2.8 -9.2 regulatory protein GntR family protein compare
BWI76_RS01680 -2.8 -7.7 transcriptional regulator IclR compare
BWI76_RS07675 -2.7 -6.2 DeoR family transcriptional regulator compare
BWI76_RS23885 -2.7 -2.7 2-octaprenylphenol hydroxylase compare
BWI76_RS17720 -2.7 -2.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS20190 -2.6 -5.4 NADH-quinone oxidoreductase subunit A compare
BWI76_RS09615 -2.6 -2.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS27815 -2.6 -14.7 acetolactate synthase catalytic subunit compare
BWI76_RS00985 -2.6 -5.8 transcriptional regulator IlvY compare
BWI76_RS26175 -2.5 -5.0 DeoR/GlpR family transcriptional regulator compare
BWI76_RS08205 -2.5 -6.1 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS03415 -2.5 -7.4 LacI family transcriptional regulator compare
BWI76_RS02735 -2.5 -6.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS27390 -2.4 -3.0 ribonuclease PH compare
BWI76_RS22240 -2.4 -9.8 transcriptional regulator compare
BWI76_RS26055 -2.4 -7.6 siroheme synthase compare
BWI76_RS20130 -2.4 -7.9 NADH-quinone oxidoreductase subunit N compare
BWI76_RS25960 -2.3 -5.7 NUDIX hydrolase compare
BWI76_RS05120 -2.3 -6.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS20140 -2.3 -5.1 NADH-quinone oxidoreductase subunit L compare
BWI76_RS20995 -2.3 -5.9 RNA degradosome polyphosphate kinase compare
BWI76_RS06485 -2.3 -3.7 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS26570 -2.3 -2.8 anion permease compare
BWI76_RS25905 -2.2 -3.3 hypothetical protein compare
BWI76_RS19600 -2.2 -4.8 hypothetical protein conserved
BWI76_RS21985 -2.2 -10.3 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BWI76_RS17065 -2.2 -8.2 phosphoenolpyruvate synthase compare
BWI76_RS06185 -2.2 -9.0 shikimate kinase II compare
BWI76_RS06730 -2.2 -3.8 lac repressor compare
BWI76_RS21990 -2.2 -6.6 ATPase AAA compare
BWI76_RS26065 -2.2 -3.9 phosphoglycolate phosphatase compare
BWI76_RS06495 -2.2 -8.7 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS22690 -2.2 -3.1 adenylyl-sulfate kinase compare
BWI76_RS07120 -2.1 -9.5 LacI family transcriptional regulator compare
BWI76_RS08430 -2.1 -3.6 succinate--CoA ligase subunit alpha compare
BWI76_RS11845 -2.1 -2.1 tryptophan synthase subunit beta compare
BWI76_RS20155 -2.1 -3.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS05015 -2.1 -3.4 transcriptional regulator compare
BWI76_RS23830 -2.0 -5.3 hypothetical protein compare
BWI76_RS20380 -2.0 -1.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS17290 -2.0 -3.7 formyltetrahydrofolate deformylase compare
BWI76_RS01205 -2.0 -2.6 DUF484 family protein compare
BWI76_RS20650 -2.0 -2.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS00140 -2.0 -1.6 phosphate transport system regulator PhoU compare
BWI76_RS05005 -2.0 -3.3 polynucleotide adenylyltransferase compare
BWI76_RS08425 -1.9 -6.2 succinyl-CoA ligase subunit beta compare
BWI76_RS05680 -1.9 -4.3 LacI family transcriptional regulator compare
BWI76_RS27075 -1.9 -4.0 IclR family transcriptional regulator compare
BWI76_RS05470 -1.9 -12.1 acyl-CoA dehydrogenase compare
BWI76_RS02970 -1.9 -7.8 trehalose operon repressor compare
BWI76_RS04240 -1.9 -3.6 thr operon leader peptide compare
BWI76_RS01385 -1.9 -2.8 potassium transporter compare
BWI76_RS22420 -1.8 -3.2 LacI family transcriptional regulator compare
BWI76_RS20165 -1.8 -5.2 NADH-quinone oxidoreductase subunit G compare
BWI76_RS24850 -1.8 -8.3 DeoR family transcriptional regulator compare
BWI76_RS27820 -1.8 -2.0 ilvB operon leader peptide IvbL compare
BWI76_RS20145 -1.8 -2.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS01325 -1.8 -2.8 twin-arginine translocase subunit TatB compare
BWI76_RS25280 -1.8 -2.4 RNase adaptor protein RapZ compare
BWI76_RS21310 -1.8 -1.4 DNA repair protein RecO compare
BWI76_RS20150 -1.8 -1.6 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26460 -1.8 -5.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20915 -1.7 -5.7 peroxiredoxin compare
BWI76_RS26620 -1.7 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS02575 -1.7 -5.9 exoribonuclease R compare
BWI76_RS27165 -1.7 -3.4 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS22120 -1.7 -7.1 glutamate--cysteine ligase compare
BWI76_RS23915 -1.7 -1.1 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS15835 -1.7 -1.2 hypothetical protein compare
BWI76_RS21480 -1.7 -5.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS12420 -1.7 -1.5 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS06490 -1.6 -3.7 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS06475 -1.6 -1.6 protoheme IX farnesyltransferase compare
BWI76_RS15225 -1.6 -5.0 DeoR family transcriptional regulator compare
BWI76_RS21100 -1.6 -2.8 nucleoside-diphosphate kinase compare
BWI76_RS04270 -1.6 -5.2 transaldolase compare
BWI76_RS20910 -1.6 -3.8 glycine cleavage system transcriptional repressor compare
BWI76_RS19700 -1.6 -2.1 deoxyribonuclease IV compare
BWI76_RS23355 -1.6 -3.9 LacI family transcriptional regulator compare
BWI76_RS25065 -1.6 -2.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00345 -1.5 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS21070 -1.5 -2.4 outer membrane protein assembly factor BamB compare
BWI76_RS15760 -1.5 -2.1 hypothetical protein compare
BWI76_RS15955 -1.5 -7.9 transcriptional regulator compare
BWI76_RS16235 -1.5 -3.2 membrane protein compare
BWI76_RS25870 -1.5 -1.9 elongation factor Tu compare
BWI76_RS00025 -1.5 -1.2 hypothetical protein compare
BWI76_RS19330 -1.5 -1.5 HAD family hydrolase compare
BWI76_RS21450 -1.5 -2.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS06295 -1.4 -4.5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS27440 -1.4 -3.7 DNA helicase RecG compare
BWI76_RS26075 -1.4 -3.6 DNA adenine methylase compare
BWI76_RS20440 -1.4 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS06525 -1.4 -3.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS10700 -1.4 -2.8 XRE family transcriptional regulator compare
BWI76_RS26190 -1.4 -3.5 glycerol-3-phosphate dehydrogenase compare
BWI76_RS02610 -1.4 -4.9 transcriptional regulator compare
BWI76_RS03040 -1.4 -3.7 leucyl aminopeptidase compare
BWI76_RS18110 -1.3 -4.3 transcriptional regulator HexR compare
BWI76_RS06340 -1.3 -1.4 hypothetical protein compare
BWI76_RS09610 -1.3 -3.0 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS25070 -1.3 -1.5 hypothetical protein compare
BWI76_RS01060 -1.3 -6.1 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare


Specific Phenotypes

For 17 genes in this experiment

For carbon source Sodium D-Lactate in Klebsiella michiganensis M5al

For carbon source Sodium D-Lactate across organisms