Experiment set5IT002 for Klebsiella michiganensis M5al

Compare to:

Trisodium citrate dihydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS04305 +2.5 3.1 molecular chaperone DnaJ compare
BWI76_RS01540 +1.6 3.0 thiamine biosynthesis protein ThiS compare
BWI76_RS13280 +1.4 6.2 LysR family transcriptional regulator compare
BWI76_RS20750 +1.3 2.3 carboxysome structural protein EutK compare
BWI76_RS12070 +1.3 2.1 hypothetical protein compare
BWI76_RS11255 +1.1 1.3 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS19935 +1.0 2.2 hypothetical protein compare
BWI76_RS24575 +1.0 1.2 hypothetical protein compare
BWI76_RS20930 +0.9 2.9 arsenate reductase (glutaredoxin) compare
BWI76_RS23125 +0.9 2.2 propanediol dehydratase small subunit compare
BWI76_RS02580 +0.9 2.0 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS07260 +0.9 3.0 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS16000 +0.8 1.5 multidrug transporter subunit MdtI compare
BWI76_RS21245 +0.8 3.4 nitrogen regulatory protein P-II compare
BWI76_RS03045 +0.8 1.3 hypothetical protein compare
BWI76_RS07595 +0.8 2.9 putative oxidoreductase compare
BWI76_RS20795 +0.8 1.3 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS09820 +0.8 3.1 hypothetical protein compare
BWI76_RS13420 +0.8 1.1 ABC transporter permease compare
BWI76_RS14615 +0.8 1.7 hypothetical protein compare
BWI76_RS11010 +0.8 1.5 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS05045 +0.8 1.3 general secretion pathway protein GspM compare
BWI76_RS14155 +0.7 1.7 transketolase compare
BWI76_RS16935 +0.7 1.1 shikimate dehydrogenase compare
BWI76_RS18060 +0.7 2.2 hypothetical protein compare
BWI76_RS22620 +0.7 2.2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS06630 +0.7 1.7 hypothetical protein compare
BWI76_RS16920 +0.7 1.6 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS19750 +0.7 2.6 elongation factor P-like protein YeiP compare
BWI76_RS21285 +0.7 1.6 HAD family hydrolase compare
BWI76_RS01995 +0.7 1.0 AraC family transcriptional regulator compare
BWI76_RS04655 +0.7 2.1 shikimate dehydrogenase compare
BWI76_RS05410 +0.7 3.7 2,5-didehydrogluconate reductase B compare
BWI76_RS19770 +0.7 1.4 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS18870 +0.7 1.2 protein NifZ compare
BWI76_RS15965 +0.7 2.8 MFS transporter compare
BWI76_RS11430 +0.7 1.0 lipoprotein compare
BWI76_RS23595 +0.7 3.2 N-acetyltransferase compare
BWI76_RS06130 +0.7 1.9 extensin family protein compare
BWI76_RS03105 +0.7 1.0 myo-inosose-2 dehydratase compare
BWI76_RS24920 +0.7 1.2 YraN family protein compare
BWI76_RS24270 +0.7 2.2 membrane protein compare
BWI76_RS10060 +0.6 1.2 acylphosphatase compare
BWI76_RS13215 +0.6 1.3 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS21905 +0.6 2.8 class II aldolase compare
BWI76_RS27195 +0.6 2.0 alpha-hydroxy-acid oxidizing enzyme compare
BWI76_RS25425 +0.6 1.5 arginine repressor compare
BWI76_RS05895 +0.6 2.0 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS10745 +0.6 1.0 hypothetical protein compare
BWI76_RS20560 +0.6 1.1 hypothetical protein compare
BWI76_RS00790 +0.6 3.1 bifunctional aspartokinase II/homoserine dehydrogenase II compare
BWI76_RS16075 +0.6 1.1 oxidoreductase compare
BWI76_RS20845 +0.6 2.5 GDP-mannose pyrophosphatase NudK compare
BWI76_RS00740 +0.6 2.1 ribonuclease E activity regulator RraA compare
BWI76_RS08765 +0.6 1.5 8-amino-7-oxononanoate synthase compare
BWI76_RS25655 +0.6 2.1 DNA topoisomerase type IA zn finger domain-containing protein compare
BWI76_RS02775 +0.6 2.8 outer membrane protein assembly factor compare
BWI76_RS01585 +0.6 2.6 transcriptional regulator compare
BWI76_RS22205 +0.6 2.4 cation ABC transporter ATP-binding protein compare
BWI76_RS14770 +0.6 1.1 PTS IIA 2 domain protein compare
BWI76_RS03825 +0.6 1.9 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS04895 +0.6 2.2 hypothetical protein compare
BWI76_RS11440 +0.6 0.9 hypothetical protein compare
BWI76_RS11675 +0.6 0.7 arginine N-succinyltransferase compare
BWI76_RS13330 +0.6 1.2 tellurite resistance methyltransferase TehB compare
BWI76_RS14510 +0.6 1.5 MFS transporter compare
BWI76_RS06325 +0.6 1.3 hypothetical protein compare
BWI76_RS20675 +0.6 1.6 GMP synthase compare
BWI76_RS04145 +0.6 2.3 purine-nucleoside phosphorylase compare
BWI76_RS11970 +0.6 1.3 stress response translation initiation inhibitor YciH compare
BWI76_RS18595 +0.6 2.6 hypothetical protein compare
BWI76_RS11770 +0.6 2.2 hypothetical protein compare
BWI76_RS15015 +0.6 1.0 DUF2132 domain-containing protein compare
BWI76_RS07640 +0.6 1.3 short chain dehydrogenase compare
BWI76_RS22260 +0.6 2.2 anaerobic nitric oxide reductase flavorubredoxin compare
BWI76_RS24965 +0.6 1.7 SCP2 domain-containing protein compare
BWI76_RS27455 +0.6 0.9 DUF805 domain-containing protein compare
BWI76_RS23040 +0.6 2.4 sirohydrochlorin cobaltochelatase compare
BWI76_RS20165 +0.6 1.7 NADH-quinone oxidoreductase subunit G compare
BWI76_RS09960 +0.6 1.1 Lon protease compare
BWI76_RS13395 +0.6 2.2 cytochrome D ubiquinol oxidase subunit I compare
BWI76_RS03665 +0.6 1.3 ABC transporter ATP-binding protein compare
BWI76_RS27635 +0.6 1.2 AraC family transcriptional regulator compare
BWI76_RS00525 +0.6 2.9 hypothetical protein compare
BWI76_RS25235 +0.6 2.8 calcium/sodium antiporter compare
BWI76_RS17320 +0.6 2.1 respiratory nitrate reductase subunit gamma compare
BWI76_RS27670 +0.5 1.2 LysR family transcriptional regulator compare
BWI76_RS16210 +0.5 1.1 hypothetical protein compare
BWI76_RS23945 +0.5 1.9 methylmalonyl-CoA decarboxylase compare
BWI76_RS19755 +0.5 2.5 fructuronate reductase compare
BWI76_RS15660 +0.5 0.6 hypothetical protein compare
BWI76_RS13980 +0.5 0.8 hypothetical protein compare
BWI76_RS01530 +0.5 2.5 2-iminoacetate synthase ThiH compare
BWI76_RS16675 +0.5 1.2 ABC transporter compare
BWI76_RS05985 +0.5 1.4 branched-chain amino acid ABC transporter permease compare
BWI76_RS12485 +0.5 1.6 TyrR family transcriptional regulator compare
BWI76_RS18090 +0.5 1.3 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS14390 +0.5 1.0 hypothetical protein compare
BWI76_RS07895 +0.5 2.2 sugar ABC transporter ATPase compare
BWI76_RS25300 +0.5 1.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS20145 +0.5 1.2 NADH-quinone oxidoreductase subunit K compare
BWI76_RS22090 +0.5 1.0 transcriptional regulator compare
BWI76_RS16690 +0.5 1.6 peptide ABC transporter permease compare
BWI76_RS03100 +0.5 1.9 protein iolH compare
BWI76_RS11985 +0.5 3.0 hypothetical protein compare
BWI76_RS09895 +0.5 1.7 aliphatic sulfonates ABC transporter ATP-binding protein compare
BWI76_RS20765 +0.5 1.9 ethanolamine ammonia lyase large subunit compare
BWI76_RS00595 +0.5 2.0 MFS transporter compare
BWI76_RS18580 +0.5 0.6 hypothetical protein compare
BWI76_RS25920 +0.5 0.8 peptidylprolyl isomerase compare
BWI76_RS11775 +0.5 1.6 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS05790 +0.5 1.1 phage DNA-binding protein compare
BWI76_RS04225 +0.5 2.9 cell envelope integrity protein CreD compare
BWI76_RS13060 +0.5 2.4 glutathione S-transferase compare
BWI76_RS12125 +0.5 0.4 hypothetical protein compare
BWI76_RS19790 +0.5 2.1 putative binding-protein-dependent transporter compare
BWI76_RS07350 +0.5 1.7 alcohol dehydrogenase compare
BWI76_RS05975 +0.5 2.6 ABC transporter ATP-binding protein compare
BWI76_RS00715 +0.5 1.5 two-component sensor histidine kinase compare
BWI76_RS23900 +0.5 2.1 hypothetical protein compare
BWI76_RS19695 +0.5 1.5 membrane protein compare
BWI76_RS17765 +0.5 1.5 hypothetical protein compare
BWI76_RS24610 +0.5 2.3 dihydroxyacetone kinase compare
BWI76_RS08590 +0.5 1.7 zinc transporter ZitB compare
BWI76_RS12985 +0.5 1.1 transcriptional regulator compare
BWI76_RS16900 +0.5 0.5 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS24100 +0.5 1.7 YggS family pyridoxal phosphate enzyme compare
BWI76_RS15135 +0.5 2.5 hypothetical protein compare
BWI76_RS25285 +0.5 0.6 HPr family phosphocarrier protein compare
BWI76_RS23310 +0.5 1.6 lysophospholipid transporter LplT compare
BWI76_RS09860 +0.5 1.5 hypothetical protein compare
BWI76_RS21105 +0.5 2.0 penicillin-binding protein 1C compare
BWI76_RS09160 +0.5 1.8 multidrug transporter MdfA compare
BWI76_RS14955 +0.5 2.0 peptidase M17 leucyl aminopeptidase domain-containing protein compare
BWI76_RS24625 +0.5 2.5 hypothetical protein compare
BWI76_RS14915 +0.5 1.4 hypothetical protein compare
BWI76_RS15970 +0.5 0.8 carboxypeptidase M32 compare
BWI76_RS09155 +0.5 2.0 undecaprenyl-diphosphatase compare
BWI76_RS17350 +0.5 1.1 DNA-binding response regulator compare
BWI76_RS18125 +0.5 2.2 murein DD-endopeptidase MepM compare
BWI76_RS03515 +0.5 1.3 hypothetical protein compare
BWI76_RS20520 +0.5 2.9 indolepyruvate decarboxylase compare
BWI76_RS24070 +0.5 1.1 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS14190 +0.5 2.0 DNA-binding protein compare
BWI76_RS09710 +0.5 1.7 transketolase compare
BWI76_RS09115 +0.5 1.3 30S ribosomal protein S12 methylthiotransferase RimO compare
BWI76_RS05940 +0.5 2.1 hypothetical protein compare
BWI76_RS22645 +0.5 1.9 RNA polymerase sigma factor RpoS compare
BWI76_RS21660 +0.5 1.0 antirestriction protein compare
BWI76_RS10895 +0.5 2.1 phosphatase compare
BWI76_RS16475 +0.5 1.5 alkene reductase compare
BWI76_RS18650 +0.5 1.8 fimbrial protein compare
BWI76_RS09805 +0.5 1.0 hypothetical protein compare
BWI76_RS16765 +0.5 2.2 spermidine/putrescine ABC transporter permease compare
BWI76_RS14680 +0.5 1.7 SefF compare
BWI76_RS16015 +0.5 1.9 pheromone autoinducer 2 transporter compare
BWI76_RS15445 +0.5 2.4 hypothetical protein compare
BWI76_RS08360 +0.5 1.8 LamB/YcsF family protein compare
BWI76_RS11980 +0.5 1.2 DeoR family transcriptional regulator compare
BWI76_RS17045 +0.5 0.7 hypothetical protein compare
BWI76_RS01680 +0.5 2.2 transcriptional regulator IclR compare
BWI76_RS05350 +0.5 3.3 Rcs stress response system protein RcsF compare
BWI76_RS04560 +0.5 1.3 holo-ACP synthase CitX compare
BWI76_RS17805 +0.5 0.7 membrane protein compare
BWI76_RS09145 +0.5 1.6 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS01590 +0.5 1.9 hypothetical protein compare
BWI76_RS21675 +0.5 0.6 hypothetical protein compare
BWI76_RS23050 +0.4 1.0 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS16220 +0.4 1.3 hypothetical protein compare
BWI76_RS20155 +0.4 1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS18180 +0.4 1.8 hypothetical protein compare
BWI76_RS01835 +0.4 2.2 chemotaxis protein CheW compare
BWI76_RS15930 +0.4 1.1 dimethylsulfoxide reductase, chain B compare
BWI76_RS04175 +0.4 1.1 energy-dependent translational throttle protein EttA compare
BWI76_RS02855 +0.4 1.2 cytochrome B562 compare
BWI76_RS22935 +0.4 0.7 L-fucose mutarotase compare
BWI76_RS08705 +0.4 2.1 putative LuxR family regulatory protein compare
BWI76_RS11705 +0.4 1.8 hypothetical protein compare
BWI76_RS00095 +0.4 1.2 DNA-binding transcriptional regulator compare
BWI76_RS11950 +0.4 1.9 phosphatidylglycerophosphatase B compare
BWI76_RS24525 +0.4 1.2 urease accessory protein UreG compare
BWI76_RS23665 +0.4 2.2 2-deoxyribose-5-phosphate aldolase compare
BWI76_RS08385 +0.4 1.0 citrate (Si)-synthase compare
BWI76_RS12585 +0.4 2.0 transcriptional regulator compare
BWI76_RS12940 +0.4 1.6 AraC family transcriptional regulator compare
BWI76_RS10435 +0.4 1.3 suppressor for copper-sensitivity C compare
BWI76_RS13805 +0.4 1.7 inorganic diphosphatase compare
BWI76_RS20885 +0.4 1.3 tRNA(Met) cytidine acetyltransferase TmcA compare
BWI76_RS23305 +0.4 1.3 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS22840 +0.4 1.0 transposase compare
BWI76_RS00240 +0.4 1.0 FMN-binding protein MioC compare
BWI76_RS06180 +0.4 1.4 hypothetical protein compare
BWI76_RS20760 +0.4 1.5 ethanolamine ammonia-lyase small subunit compare
BWI76_RS15300 +0.4 1.3 multiple antibiotic resistance regulatory periplasmic protein MarB compare
BWI76_RS04700 +0.4 1.8 acetolactate synthase small subunit compare
BWI76_RS14225 +0.4 1.0 anti-ECF sigma factor ChrR compare
BWI76_RS15045 +0.4 0.9 LysR family transcriptional regulator compare
BWI76_RS10650 +0.4 1.2 PTS fructose-like transporter subunit EIIB compare
BWI76_RS16200 +0.4 1.3 NAD(P) transhydrogenase subunit beta compare
BWI76_RS10570 +0.4 1.3 cysteine ABC transporter substrate-binding protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Trisodium citrate dihydrate in Klebsiella michiganensis M5al

For carbon source Trisodium citrate dihydrate across organisms