Experiment set5IT001 for Klebsiella michiganensis M5al

Compare to:

D-Cellobiose carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS03025 +1.9 1.6 N-acetyltransferase compare
BWI76_RS15015 +1.9 3.9 DUF2132 domain-containing protein compare
BWI76_RS12485 +1.1 3.6 TyrR family transcriptional regulator compare
BWI76_RS01995 +1.1 1.6 AraC family transcriptional regulator compare
BWI76_RS24575 +1.1 1.5 hypothetical protein compare
BWI76_RS07640 +1.1 2.0 short chain dehydrogenase compare
BWI76_RS20930 +1.0 1.8 arsenate reductase (glutaredoxin) compare
BWI76_RS22640 +1.0 2.4 hypothetical protein compare
BWI76_RS14540 +0.9 2.6 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS06665 +0.9 1.7 membrane protein compare
BWI76_RS21375 +0.9 1.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00715 +0.9 2.1 two-component sensor histidine kinase compare
BWI76_RS19770 +0.9 1.8 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS21565 +0.9 1.4 outer membrane protein assembly factor BamE compare
BWI76_RS11440 +0.8 1.3 hypothetical protein compare
BWI76_RS21130 +0.8 1.9 Fe-S assembly protein IscX compare
BWI76_RS04305 +0.8 0.8 molecular chaperone DnaJ compare
BWI76_RS20720 +0.8 0.9 hypothetical protein compare
BWI76_RS14575 +0.8 2.6 TENA/THI-4 family protein compare
BWI76_RS15135 +0.8 4.7 hypothetical protein compare
BWI76_RS16935 +0.8 1.2 shikimate dehydrogenase compare
BWI76_RS03045 +0.8 1.2 hypothetical protein compare
BWI76_RS20795 +0.8 1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS13970 +0.8 1.7 ABC transporter compare
BWI76_RS19935 +0.8 1.5 hypothetical protein compare
BWI76_RS14620 +0.8 2.4 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS16675 +0.8 1.1 ABC transporter compare
BWI76_RS18780 +0.7 2.2 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS22475 +0.7 1.6 heme ABC transporter ATP-binding protein compare
BWI76_RS11125 +0.7 1.3 metal-dependent hydrolase compare
BWI76_RS08275 +0.7 1.1 LexA regulated protein compare
BWI76_RS07895 +0.7 3.1 sugar ABC transporter ATPase compare
BWI76_RS06325 +0.7 1.4 hypothetical protein compare
BWI76_RS18240 +0.7 1.1 L-arabinose ABC transporter permease AraH compare
BWI76_RS26020 +0.7 2.1 peptidylprolyl isomerase A compare
BWI76_RS24945 +0.7 1.1 glutamine amidotransferase compare
BWI76_RS06810 +0.7 1.1 hypothetical protein compare
BWI76_RS06680 +0.7 1.1 hypothetical protein compare
BWI76_RS07255 +0.7 2.0 hypothetical protein compare
BWI76_RS08585 +0.7 2.1 nicotinamide riboside transporter PnuC compare
BWI76_RS01585 +0.7 3.2 transcriptional regulator compare
BWI76_RS24630 +0.7 4.1 putrescine aminotransferase compare
BWI76_RS15950 +0.7 1.7 dethiobiotin synthase compare
BWI76_RS21340 +0.7 1.8 SoxR reducing system protein RseC compare
BWI76_RS19865 +0.7 1.9 ecotin compare
BWI76_RS13415 +0.7 2.4 spermidine/putrescine ABC transporter permease compare
BWI76_RS16325 +0.7 3.4 adenosine deaminase compare
BWI76_RS01815 +0.7 2.1 phosphate-starvation-inducible protein PsiE compare
BWI76_RS16685 +0.7 3.3 peptide ABC transporter permease compare
BWI76_RS11515 +0.7 0.7 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS21075 +0.7 1.0 membrane protein compare
BWI76_RS13250 +0.7 1.0 cytochrome b561 compare
BWI76_RS17350 +0.7 2.1 DNA-binding response regulator compare
BWI76_RS24925 +0.6 1.2 DnaA initiator-associating protein DiaA compare
BWI76_RS15150 +0.6 1.9 outer membrane efflux protein compare
BWI76_RS20145 +0.6 1.4 NADH-quinone oxidoreductase subunit K compare
BWI76_RS20900 +0.6 0.8 outer membrane protein assembly factor BamC compare
BWI76_RS22125 +0.6 2.1 membrane protein compare
BWI76_RS09710 +0.6 1.9 transketolase compare
BWI76_RS06405 +0.6 0.8 2-dehydropantoate 2-reductase compare
BWI76_RS08750 +0.6 1.1 kinase inhibitor compare
BWI76_RS15290 +0.6 1.1 transcriptional regulator compare
BWI76_RS25300 +0.6 2.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS04565 +0.6 1.8 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA compare
BWI76_RS16355 +0.6 1.0 electron transport complex subunit A compare
BWI76_RS00720 +0.6 1.5 DNA-binding response regulator compare
BWI76_RS02745 +0.6 1.1 hypothetical protein compare
BWI76_RS13135 +0.6 2.6 3-oxoadipyl-CoA thiolase compare
BWI76_RS23195 +0.6 1.1 ethanolamine utilization protein EutP compare
BWI76_RS09450 +0.6 1.6 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS15795 +0.6 2.1 bacteriophage CII family protein compare
BWI76_RS17310 +0.6 2.3 AsnC family transcriptional regulator compare
BWI76_RS25915 +0.6 2.1 protein SlyX compare
BWI76_RS11520 +0.6 0.8 hypothetical protein compare
BWI76_RS10450 +0.6 2.2 tRNA-Tyr compare
BWI76_RS16900 +0.6 1.1 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS12150 +0.6 1.8 DNA damage-inducible protein I compare
BWI76_RS07765 +0.6 0.9 thioesterase compare
BWI76_RS04260 +0.6 2.7 peroxide stress protein YaaA compare
BWI76_RS00440 +0.6 1.1 CopG family transcriptional regulator compare
BWI76_RS13980 +0.6 0.7 hypothetical protein compare
BWI76_RS19585 +0.6 1.7 gentisate 1,2-dioxygenase compare
BWI76_RS11525 +0.6 0.8 HNH endonuclease compare
BWI76_RS15940 +0.6 1.6 DMSO reductase maturation protein DsmD compare
BWI76_RS11345 +0.6 2.1 LysR family transcriptional regulator compare
BWI76_RS18870 +0.6 1.0 protein NifZ compare
BWI76_RS10295 +0.6 2.1 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS00425 +0.6 2.2 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS14680 +0.6 1.7 SefF compare
BWI76_RS07710 +0.6 2.6 invasin-like protein compare
BWI76_RS10400 +0.6 2.0 hypothetical protein compare
BWI76_RS09250 +0.6 1.6 hypothetical protein compare
BWI76_RS11895 +0.6 2.1 AraC family transcriptional regulator compare
BWI76_RS25545 +0.6 1.4 hypothetical protein compare
BWI76_RS11490 +0.6 1.8 MltA-interacting protein MipA compare
BWI76_RS17390 +0.6 1.3 DsrE family protein compare
BWI76_RS22815 +0.6 4.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS03925 +0.5 2.1 N-acetyltransferase GCN5 compare
BWI76_RS18335 +0.5 2.7 DNA-binding response regulator compare
BWI76_RS12040 +0.5 0.8 hypothetical protein compare
BWI76_RS08375 +0.5 1.0 pyroglutamyl-peptidase I compare
BWI76_RS11335 +0.5 1.0 tautomerase compare
BWI76_RS19890 +0.5 1.6 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS05785 +0.5 1.8 CI repressor compare
BWI76_RS18065 +0.5 1.4 DNA polymerase III subunit theta compare
BWI76_RS00640 +0.5 1.0 L-rhamnose mutarotase compare
BWI76_RS16920 +0.5 1.0 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS02860 +0.5 1.8 glycine dehydrogenase compare
BWI76_RS14510 +0.5 2.0 MFS transporter compare
BWI76_RS08625 +0.5 2.0 UDP-glucose 4-epimerase GalE compare
BWI76_RS05645 +0.5 1.4 fructuronate reductase compare
BWI76_RS17970 +0.5 1.0 zinc metalloprotease HtpX compare
BWI76_RS08650 +0.5 1.7 molybdate ABC transporter permease compare
BWI76_RS02445 +0.5 2.0 fumarate reductase subunit C compare
BWI76_RS02885 +0.5 2.4 dihydroorotase compare
BWI76_RS01775 +0.5 0.9 hypothetical protein compare
BWI76_RS09860 +0.5 1.8 hypothetical protein compare
BWI76_RS06560 +0.5 1.4 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS20155 +0.5 1.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS23735 +0.5 1.7 sugar diacid utilization regulator compare
BWI76_RS04655 +0.5 1.2 shikimate dehydrogenase compare
BWI76_RS15050 +0.5 1.9 sugar transporter compare
BWI76_RS24810 +0.5 1.6 hypothetical protein compare
BWI76_RS26505 +0.5 1.4 nickel ABC transporter permease subunit NikB compare
BWI76_RS27735 +0.5 2.0 hypothetical protein compare
BWI76_RS16450 +0.5 2.0 fusaric acid resistance protein compare
BWI76_RS12470 +0.5 0.9 thiosulfate sulfurtransferase PspE compare
BWI76_RS06075 +0.5 1.8 taurine transporter subunit compare
BWI76_RS23555 +0.5 1.6 type 1 major fimbrial subunit precursor compare
BWI76_RS13610 +0.5 1.4 sugar transporter compare
BWI76_RS20375 +0.5 0.9 membrane protein compare
BWI76_RS22620 +0.5 1.4 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS13395 +0.5 3.1 cytochrome D ubiquinol oxidase subunit I compare
BWI76_RS20335 +0.5 1.8 zinc transporter compare
BWI76_RS11285 +0.5 1.0 transcriptional regulator compare
BWI76_RS17945 +0.5 0.8 hypothetical protein compare
BWI76_RS18580 +0.5 1.3 hypothetical protein compare
BWI76_RS10570 +0.5 1.5 cysteine ABC transporter substrate-binding protein compare
BWI76_RS00885 +0.5 1.5 tRNA (uridine(54)-C5)-methyltransferase TrmA compare
BWI76_RS10725 +0.5 1.9 hypothetical protein compare
BWI76_RS16050 +0.5 1.5 malonate decarboxylase holo-ACP synthase compare
BWI76_RS24745 +0.5 1.2 membrane protein compare
BWI76_RS25935 +0.5 1.6 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS03295 +0.5 1.1 transposase compare
BWI76_RS17465 +0.5 2.2 C4-dicarboxylic acid transporter DauA compare
BWI76_RS16455 +0.5 1.3 superoxide dismutase compare
BWI76_RS04895 +0.5 1.4 hypothetical protein compare
BWI76_RS18585 +0.5 2.3 two-component sensor histidine kinase compare
BWI76_RS05075 +0.5 0.6 type II secretion system protein GspG compare
BWI76_RS08735 +0.5 2.3 Urocanate hydratase (EC 4.2.1.49) (from data) compare
BWI76_RS23060 +0.5 2.3 cobalt-precorrin-4 C(11)-methyltransferase compare
BWI76_RS01260 +0.5 2.1 lysophospholipase L2 compare
BWI76_RS19235 +0.5 2.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS21105 +0.5 1.8 penicillin-binding protein 1C compare
BWI76_RS27510 +0.5 1.5 aquaporin compare
BWI76_RS06630 +0.5 1.7 hypothetical protein compare
BWI76_RS15190 +0.5 1.5 GGDEF domain-containing protein compare
BWI76_RS12855 +0.5 0.8 enamine deaminase RidA compare
BWI76_RS27830 +0.5 1.8 type I toxin-antitoxin system toxin TisB compare
BWI76_RS26280 +0.5 1.4 hypothetical protein compare
BWI76_RS24740 +0.5 1.7 GntR family transcriptional regulator compare
BWI76_RS09240 +0.5 1.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS16055 +0.5 2.1 malonate decarboxylase subunit epsilon compare
BWI76_RS14980 +0.5 0.7 hypothetical protein compare
BWI76_RS27630 +0.5 1.5 antibiotic biosynthesis monooxygenase compare
BWI76_RS19835 +0.5 1.2 nucleoid-associated protein YejK compare
BWI76_RS16400 +0.5 1.4 pyridoxal kinase compare
BWI76_RS02875 +0.5 2.1 membrane protein compare
BWI76_RS19300 +0.5 2.2 ABC transporter ATP-binding protein compare
BWI76_RS13710 +0.5 1.5 benzoate 1,2-dioxygenase small subunit compare
BWI76_RS09690 +0.5 1.3 dimethyl sulfoxide reductase compare
BWI76_RS13405 +0.5 1.9 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS10060 +0.4 0.8 acylphosphatase compare
BWI76_RS05465 +0.4 0.7 amidohydrolase compare
BWI76_RS06975 +0.4 2.5 DNA-binding transcriptional activator AllS compare
BWI76_RS26630 +0.4 1.8 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS05355 +0.4 1.4 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS06870 +0.4 2.4 aminoacyl-tRNA deacylase compare
BWI76_RS14430 +0.4 1.9 peptidase C45 compare
BWI76_RS10950 +0.4 1.5 MFS transporter compare
BWI76_RS24370 +0.4 1.6 hypothetical protein compare
BWI76_RS18125 +0.4 1.9 murein DD-endopeptidase MepM compare
BWI76_RS21370 +0.4 0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS07830 +0.4 2.0 3-phytase compare
BWI76_RS04605 +0.4 0.8 thiamine ABC transporter ATP-binding protein compare
BWI76_RS09305 +0.4 1.4 hypothetical protein compare
BWI76_RS13890 +0.4 1.9 LysR family transcriptional regulator compare
BWI76_RS26245 +0.4 0.9 transcriptional regulator compare
BWI76_RS21905 +0.4 1.0 class II aldolase compare
BWI76_RS13495 +0.4 1.7 hypothetical protein compare
BWI76_RS04010 +0.4 1.7 hypothetical protein compare
BWI76_RS16915 +0.4 1.8 alpha/beta hydrolase fold protein compare
BWI76_RS16270 +0.4 1.9 fumarate hydratase, class II compare
BWI76_RS15195 +0.4 1.2 DUF4186 domain-containing protein compare
BWI76_RS10855 +0.4 1.5 RND family efflux transporter MFP subunit compare
BWI76_RS24650 +0.4 1.0 putative transport system permease component compare
BWI76_RS12290 +0.4 1.8 hypothetical protein compare
BWI76_RS19195 +0.4 1.5 nickel ABC transporter permease compare
BWI76_RS12170 +0.4 0.9 hypothetical protein compare
BWI76_RS20290 +0.4 1.2 thiol:disulfide oxidoreductase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source D-Cellobiose in Klebsiella michiganensis M5al

For carbon source D-Cellobiose across organisms