Experiment set5H21 for Shewanella amazonensis SB2B
LB with Benzalkonium Chloride 0.004 mg/ml
Group: stressMedia: LB + Benzalkonium Chloride (0.004 mg/ml)
Culturing: SB2B_ML5, 48 well microplate; Tecan Infinite F200, Aerobic, at 37 (C), shaken=orbital
By: Adam on 7/30/2013
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 594 D7,D8
Specific Phenotypes
For 20 genes in this experiment
For stress Benzalkonium Chloride in Shewanella amazonensis SB2B
For stress Benzalkonium Chloride across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| guanine and guanosine salvage III | 1 | 1 | 1 |
| superoxide radicals degradation | 2 | 2 | 1 |
| methanol oxidation to formaldehyde IV | 2 | 1 | 1 |
| ethanol degradation IV | 3 | 3 | 1 |
| superpathway of guanine and guanosine salvage | 3 | 3 | 1 |
| adenine and adenosine salvage V | 3 | 3 | 1 |
| reactive oxygen species degradation | 4 | 4 | 1 |