Experiment set4S292 for Mycobacterium tuberculosis H37Rv

Compare to:

7H9 with Delamanid 0.236 ug/mL

200 most important genes:

  gene name fitness t score description  
Rv1620c -2.3 -4.7 Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydC compare
Rv1836c -2.2 -3.6 Conserved protein compare
Rv0472c -2.1 -5.1 Probable transcriptional regulatory protein (possibly TetR-family) compare
Rv3920c -1.8 -2.0 Conserved protein similar to jag protein compare
Rv0819 -1.8 -4.6 GCN5-related N-acetyltransferase, MshD compare
Rv2073c -1.7 -9.0 Probable shortchain dehydrogenase compare
Rv3193c -1.7 -2.6 Probable conserved transmembrane protein compare
Rv2694c -1.6 -4.9 Conserved protein compare
Rv0930 -1.6 -7.1 Probable phosphate-transport integral membrane ABC transporter PstA1 compare
Rv1821 -1.6 -4.6 Possible preprotein translocase ATPase SecA2 compare
Rv2476c -1.6 -5.0 Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase) compare
Rv0820 -1.5 -4.4 Probable phosphate-transport ATP-binding protein ABC transporter PhoT compare
Rv0758 -1.5 -3.1 Possible two component system response sensor kinase membrane associated PhoR compare
Rv2581c -1.5 -1.5 Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II) compare
Rv3101c -1.5 -2.6 Putative cell division protein FtsX (septation component-transport integral membrane protein ABC transporter) compare
Rv1565c -1.5 -6.2 Conserved hypothetical membrane protein compare
Rv0632c -1.5 -2.9 Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv1908c -1.5 -3.5 Catalase-peroxidase-peroxynitritase T KatG compare
Rv0504c -1.4 -1.8 Conserved protein compare
Rv1013 -1.4 -7.0 Putative polyketide synthase Pks16 compare
Rv0989c -1.4 -8.0 Probable polyprenyl-diphosphate synthase GrcC2 (polyprenyl pyrophosphate synthetase) compare
Rv1930c -1.4 -1.5 Conserved hypothetical protein compare
Rv1414 -1.4 -1.2 Conserved hypothetical protein compare
Rv1420 -1.4 -3.5 Probable excinuclease ABC (subunit C-nuclease) UvrC compare
Rv3102c -1.3 -3.8 Putative cell division ATP-binding protein FtsE (septation component-transport ATP-binding protein ABC transporter) compare
Rv0928 -1.3 -4.4 Periplasmic phosphate-binding lipoprotein PstS3 (PBP-3) (PstS3) (PHOS1) compare
Rv2272 -1.3 -1.2 Probable conserved transmembrane protein compare
Rv0929 -1.3 -2.7 Phosphate-transport integral membrane ABC transporter PstC2 compare
Rv0241c -1.3 -2.9 Probable 3-hydroxyacyl-thioester dehydratase HtdX compare
Rv1621c -1.3 -2.7 Probable 'component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein ABC transporter CydD compare
Rv3033 -1.2 -0.9 Unknown protein compare
Rv0016c -1.2 -3.2 Probable penicillin-binding protein PbpA compare
Rv1909c -1.2 -3.8 Ferric uptake regulation protein FurA (fur) compare
Rv0748 -1.2 -3.1 Possible antitoxin VapB31 compare
Rv1946c -1.2 -2.7 Possible lipoprotein compare
Rv3655c -1.2 -2.7 Conserved hypothetical protein compare
Rv2630 -1.1 -1.3 Hypothetical protein compare
Rv1421 -1.1 -2.6 Conserved protein compare
Rv1577c -1.1 -1.2 Probable PhiRv1 phage protein compare
Rv0200 -1.1 -2.4 Possible conserved transmembrane protein compare
Rv2691 -1.1 -4.8 TRK system potassium uptake protein CeoB compare
Rv1411c -1.1 -3.7 Conserved lipoprotein LprG compare
Rv0971c -1.1 -2.9 Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv3287c -1.1 -1.2 Anti-sigma factor RsbW (sigma negative effector) compare
Rv1127c -1.1 -1.6 Probable pyruvate, phosphate dikinase PpdK compare
Rv0018c -1.1 -2.5 Phosphoserine/threonine phosphatase PstP compare
Rv0093c -1.1 -1.3 Probable conserved membrane protein compare
Rv1410c -1.0 -4.9 Aminoglycosides/tetracycline-transport integral membrane protein compare
Rv0321 -1.0 -2.3 Probable deoxycytidine triphosphate deaminase Dcd (dCTP deaminase) compare
Rv0451c -1.0 -1.5 Probable conserved membrane protein MmpS4 compare
Rv1272c -1.0 -5.2 Probable drugs-transport transmembrane ATP-binding protein ABC transporter compare
Rv0270 -1.0 -4.1 Probable fatty-acid-CoA ligase FadD2 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv1683 -1.0 -5.1 Possible bifunctional enzyme; long-chain acyl-CoA synthase and lipase. compare
Rv3306c -1.0 -1.4 Probable amidohydrolase AmiB1 (aminohydrolase) compare
Rv3222c -1.0 -1.1 Conserved hypothetical protein compare
Rv1159 -1.0 -2.1 Mannosyltransferase PimE compare
Rv0954 -1.0 -4.8 Probable conserved transmembrane protein compare
Rv0383c -1.0 -1.0 Possible conserved secreted protein compare
Rv0353 -0.9 -3.9 Probable heat shock protein transcriptional repressor HspR (MerR family) compare
Rv0497 -0.9 -1.9 Probable conserved transmembrane protein compare
Rv2869c -0.9 -1.5 Membrane bound metalloprotease compare
Rv2224c -0.9 -7.5 Probable carboxylesterase CaeA compare
Rv2048c -0.9 -4.3 Polyketide synthase Pks12 compare
Rv2240c -0.9 -1.2 Unknown protein compare
Rv3013 -0.9 -1.1 Conserved protein compare
Rv0007 -0.9 -0.6 Possible conserved membrane protein compare
Rv3481c -0.9 -0.9 Probable integral membrane protein compare
Rv1273c -0.9 -3.8 Probable drugs-transport transmembrane ATP-binding protein ABC transporter compare
Rv2049c -0.9 -1.1 Conserved hypothetical protein compare
Rv0017c -0.9 -3.5 Probable cell division protein RodA compare
Rv1244 -0.9 -4.0 Probable lipoprotein LpqZ compare
Rv0950c -0.9 -4.3 Conserved hypothetical protein compare
Rv0452 -0.9 -2.2 Possible transcriptional regulatory protein compare
Rv2369c -0.8 -0.9 Hypothetical protein compare
Rv3850 -0.8 -1.4 Conserved protein compare
Rv2936 -0.8 -6.8 Daunorubicin-dim-transport ATP-binding protein ABC transporter DrrA compare
Rv0019c -0.8 -4.0 Conserved protein with FHA domain, FhaB compare
Rv2553c -0.8 -0.6 Probable conserved membrane protein compare
Rv0470c -0.8 -1.8 Mycolic acid synthase PcaA (cyclopropane synthase) compare
Rv1366A -0.8 -0.9 Conserved protein compare
Rv2171 -0.8 -1.5 Probable conserved lipoprotein LppM compare
Rv1290A -0.8 -0.8 Hypothetical protein compare
Rv0437c -0.8 -0.7 Possible phosphatidylserine decarboxylase Psd (PS decarboxylase) compare
Rv1053c -0.8 -0.8 Hypothetical protein compare
Rv1062 -0.8 -0.9 Conserved hypothetical protein compare
Rv1401 -0.8 -1.0 Possible membrane protein compare
Rv2912c -0.8 -2.5 Probable transcriptional regulatory protein (probably TetR-family) compare
Rv0050 -0.8 -1.9 Probable bifunctional penicillin-binding protein 1A/1B PonA1 (murein polymerase) (PBP1): penicillin-insensitive transglycosylase (peptidoglycan TGASE) + penicillin-sensitive transpeptidase (DD-transpeptidase) compare
Rv1447c -0.8 -3.0 Probable glucose-6-phosphate 1-dehydrogenase Zwf2 (G6PD) compare
Rv1021 -0.8 -1.2 Conserved protein compare
Rv2680 -0.8 -1.3 Conserved protein compare
Rv3182 -0.8 -0.7 Conserved hypothetical protein compare
Rv2733c -0.7 -1.5 Conserved hypothetical alanine, arginine-rich protein compare
Rv0580c -0.7 -0.7 Conserved protein compare
Rv1710 -0.7 -1.0 Possible segregation and condensation protein ScpB compare
Rv1901 -0.7 -4.6 Probable CinA-like protein CinA compare
Rv1941 -0.7 -1.3 Probable short-chain type dehydrogenase/reductase compare
Rv1102c -0.7 -1.4 Toxin MazF3 compare
Rv3237c -0.7 -3.7 Conserved protein compare
Rv1745c -0.7 -3.1 Probable isopentenyl-diphosphate delta-isomerase Idi (IPP isomerase) (isopentenyl pyrophosphate isomerase) compare
Rv0243 -0.7 -3.8 Probable acetyl-CoA acyltransferase FadA2 (3-ketoacyl-CoA thiolase) (beta-ketothiolase) compare
Rv1096 -0.7 -0.9 Possible glycosyl hydrolase compare
Rv1566c -0.7 -2.5 Possible Inv protein compare
Rv2374c -0.7 -2.0 Probable heat shock protein transcriptional repressor HrcA compare
Rv2945c -0.7 -3.9 Probable conserved lipoprotein LppX compare
Rv2429 -0.7 -1.6 Alkyl hydroperoxide reductase D protein AhpD (alkyl hydroperoxidase D) compare
Rv0395 -0.7 -1.5 Hypothetical protein compare
Rv2942 -0.7 -6.1 Conserved transmembrane transport protein MmpL7 compare
Rv3405c -0.7 -1.1 Possible transcriptional regulatory protein compare
Rv3922c -0.7 -1.7 Possible hemolysin compare
Rv3200c -0.7 -2.1 Possible transmembrane cation transporter compare
Rv1291c -0.7 -1.1 Conserved hypothetical secreted protein compare
Rv0177 -0.7 -1.3 Probable conserved Mce associated protein compare
Rv3872 -0.7 -1.1 PE family-related protein PE35 compare
Rv3803c -0.7 -3.6 Secreted MPT51/MPB51 antigen protein FbpD (MPT51/MPB51 antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C) (85C) compare
Rv0113 -0.7 -0.8 Probable sedoheptulose-7-phosphate isomerase GmhA (phosphoheptose isomerase) compare
Rv0245 -0.7 -1.9 Possible oxidoreductase compare
Rv3081 -0.7 -0.9 Conserved hypothetical protein compare
Rv1675c -0.7 -1.5 Probable transcriptional regulatory protein Cmr compare
Rv3843c -0.7 -1.3 Probable conserved transmembrane protein compare
Rv3139 -0.7 -2.4 Probable acyl-CoA dehydrogenase FadE24 compare
Rv0202c -0.7 -4.0 Probable conserved transmembrane transport protein MmpL11 compare
Rv0564c -0.7 -1.4 Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) compare
Rv2706c -0.7 -0.8 Hypothetical protein compare
Rv2275 -0.7 -0.9 Conserved hypothetical protein compare
Rv3813c -0.7 -1.7 Conserved protein compare
Rv3438 -0.7 -1.7 Conserved protein compare
Rv3874 -0.7 -0.7 10 kDa culture filtrate antigen EsxB (LHP) (CFP10) compare
Rv0003 -0.7 -1.9 DNA replication and repair protein RecF (single-strand DNA binding protein) compare
Rv0135c -0.7 -2.7 Possible transcriptional regulatory protein compare
Rv0598c -0.7 -1.5 Possible toxin VapC27. Contains PIN domain. compare
Rv2709 -0.7 -2.9 Probable conserved transmembrane protein compare
Rv0310c -0.6 -1.4 Conserved protein compare
Rv3630 -0.6 -2.8 Probable conserved integral membrane protein compare
Rv2437 -0.6 -1.6 Conserved transmembrane protein compare
Rv3140 -0.6 -1.3 Probable acyl-CoA dehydrogenase FadE23 compare
Rv3249c -0.6 -0.8 Possible transcriptional regulatory protein (probably TetR-family) compare
Rv2427A -0.6 -1.6 'Transcriptional regulator OxyR', pseudogene' pseudogene=unknown transl_table=11 compare
Rv2372c -0.6 -0.9 Conserved hypothetical protein compare
Rv2529 -0.6 -2.0 Hypothetical protein compare
Rv2510c -0.6 -2.5 Conserved protein compare
Rv2047c -0.6 -3.2 Conserved hypothetical protein compare
Rv3311 -0.6 -2.9 Conserved protein compare
Rv0020c -0.6 -4.3 Conserved protein with FHA domain, FhaA compare
Rv0306 -0.6 -1.8 Putative oxidoreductase compare
Rv2973c -0.6 -3.2 Probable ATP-dependent DNA helicase RecG compare
Rv0852 -0.6 -1.3 Possible fatty-acid-CoA ligase FadD16 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv0569 -0.6 -1.4 Conserved protein compare
Rv3768 -0.6 -1.2 Unknown protein compare
Rv1350 -0.6 -0.8 Probable 3-oxoacyl-[acyl-carrier protein] reductase FabG2 (3-ketoacyl-acyl carrier protein reductase) compare
Rv3133c -0.6 -1.5 Two component transcriptional regulatory protein DevR (probably LuxR/UhpA-family) compare
Rv0740 -0.6 -2.1 Conserved hypothetical protein compare
Rv1287 -0.6 -1.1 Conserved hypothetical protein compare
Rv2922c -0.6 -2.0 Probable chromosome partition protein Smc compare
Rv2975c -0.6 -0.7 Conserved hypothetical protein compare
Rv1131 -0.6 -1.8 Probable methylcitrate synthase PrpC compare
Rv1598c -0.6 -2.0 Conserved protein compare
Rv2707 -0.6 -4.3 Probable conserved transmembrane alanine and leucine rich protein compare
Rv2850c -0.6 -0.8 Possible magnesium chelatase compare
Rv3557c -0.6 -3.2 Transcriptional regulatory protein (probably TetR-family) compare
Rv2937 -0.6 -4.1 Daunorubicin-dim-transport integral membrane protein ABC transporter DrrB compare
Rv2569c -0.6 -2.5 Conserved hypothetical protein compare
Rv2635 -0.6 -0.5 Hypothetical protein compare
Rv0199 -0.6 -1.6 Probable conserved membrane protein compare
Rv1398c -0.6 -1.0 Possible antitoxin VapB10 compare
Rv3513c -0.6 -0.5 Probable fatty-acid-CoA ligase FadD18 (fragment) (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) compare
Rv1281c -0.6 -1.3 Probable oligopeptide-transport ATP-binding protein ABC transporter OppD compare
Rv0655 -0.6 -1.9 Possible ribonucleotide-transport ATP-binding protein ABC transporter Mkl compare
Rv0738 -0.6 -0.8 Conserved protein compare
Rv3364c -0.6 -1.7 Conserved protein compare
Rv2938 -0.6 -3.9 Probable daunorubicin-dim-transport integral membrane protein ABC transporter DrrC compare
Rv3143 -0.6 -0.5 Probable response regulator compare
Rv1640c -0.6 -3.7 Lysyl-tRNA synthetase 2 LysX compare
Rv0207c -0.6 -1.4 Conserved hypothetical protein compare
Rv2696c -0.6 -0.9 Conserved alanine and glycine and valine rich protein compare
Rv2190c -0.6 -2.2 Conserved hypothetical protein compare
Rv2793c -0.6 -0.9 Probable tRNA pseudouridine synthase B TruB (tRNA pseudouridine 55 synthase) (PSI55 synthase) (pseudouridylate synthase) (uracil hydrolyase) compare
Rv0675 -0.5 -0.5 Probable enoyl-CoA hydratase EchA5 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv1925 -0.5 -3.6 Probable acyl-CoA ligase FadD31 (acyl-CoA synthetase) (acyl-CoA synthase) compare
Rv0752c -0.5 -1.9 Probable acyl-CoA dehydrogenase FadE9 compare
Rv1100 -0.5 -1.7 Conserved protein compare
Rv1006 -0.5 -2.6 Unknown protein compare
Rv3855 -0.5 -2.4 Transcriptional regulatory repressor protein (TetR-family) EthR compare
Rv0905 -0.5 -1.5 Possible enoyl-CoA hydratase EchA6 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv0490 -0.5 -2.2 Putative two component sensor histidine kinase SenX3 compare
Rv2867c -0.5 -2.4 GCN5-related N-acetyltransferase compare
Rv3433c -0.5 -1.1 Conserved protein compare
Rv0038 -0.5 -2.3 Conserved protein compare
Rv1303 -0.5 -0.6 Conserved hypothetical transmembrane protein compare
Rv1935c -0.5 -2.3 Possible enoyl-CoA hydratase EchA13 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) compare
Rv2618 -0.5 -2.7 Conserved hypothetical protein compare
Rv0084 -0.5 -1.2 Possible formate hydrogenlyase HycD (FHL) compare
Rv1531 -0.5 -0.6 Conserved protein compare
Rv2737c -0.5 -2.0 RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. compare
Rv1514c -0.5 -1.8 Conserved hypothetical protein compare
Rv1247c -0.5 -1.2 Antitoxin RelB compare
Rv1128c -0.5 -1.1 Conserved hypothetical protein compare
Rv3073c -0.5 -1.0 Conserved hypothetical protein compare
Rv3335c -0.5 -2.1 Probable conserved integral membrane protein compare
Rv0653c -0.5 -1.9 Possible transcriptional regulatory protein (probably TetR-family) compare


Specific Phenotypes

For 2 genes in this experiment

For stress Delamanid in Mycobacterium tuberculosis H37Rv

For stress Delamanid across organisms