Experiment set4S173 for Rahnella sp. WP5

200 most important genes:

gene	name	fitness	t score	description
EX31_RS14405		-3.4	-3.3	lipopolysaccharide heptosyltransferase RfaC
EX31_RS23485		-3.2	-3.1	colicin uptake protein TolR
EX31_RS03790		-3.0	-4.0	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
EX31_RS13870		-2.6	-1.7	pyruvate kinase PykF
EX31_RS23320		-2.5	-6.7	alpha-D-glucose phosphate-specific phosphoglucomutase
EX31_RS22750		-2.4	-5.8	phosphoribosylaminoimidazolesuccinocarboxamide synthase
EX31_RS07475		-2.4	-2.4	hypothetical protein
EX31_RS21020		-2.4	-3.2	D-sedoheptulose 7-phosphate isomerase
EX31_RS22695		-2.1	-8.0	phosphoribosylformylglycinamidine cyclo-ligase
EX31_RS11840		-2.0	-13.4	diacylglycerol kinase
EX31_RS18255		-1.9	-3.8	3-phosphoserine/phosphohydroxythreonine transaminase
EX31_RS03250		-1.9	-9.2	RNA polymerase-binding protein DksA
EX31_RS02520		-1.8	-1.3	sigma-54-dependent Fis family transcriptional regulator
EX31_RS21895		-1.8	-13.1	phosphoribosylformylglycinamidine synthase
EX31_RS08140		-1.8	-3.2	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
EX31_RS23480		-1.8	-3.6	Tol-Pal system protein TolQ
EX31_RS14445		-1.7	-7.1	glycosyltransferase family 2 protein
EX31_RS16860		-1.7	-13.2	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
EX31_RS12400		-1.7	-1.2	RNA polymerase factor sigma-54
EX31_RS06225		-1.7	-2.1	hypothetical protein
EX31_RS11500		-1.6	-2.0	glycosyltransferase family 2 protein
EX31_RS14400		-1.6	-5.2	ADP-heptose--LPS heptosyltransferase RfaF
EX31_RS23440		-1.6	-2.7	2-oxoglutarate dehydrogenase E1 component
EX31_RS22430		-1.5	-1.8	hemolysin expression modulator Hha
EX31_RS15870		-1.5	-2.5	glutamate--ammonia ligase
EX31_RS11525		-1.5	-3.4	UTP--glucose-1-phosphate uridylyltransferase GalU
EX31_RS16855		-1.5	-10.2	phosphoribosylamine--glycine ligase
EX31_RS01885		-1.5	-2.7	type IV secretion protein Rhs
EX31_RS19570		-1.5	-9.9	amidophosphoribosyltransferase
EX31_RS14435		-1.5	-7.1	glycosyltransferase family 4 protein
EX31_RS15085		-1.5	-4.8	lipid III flippase WzxE
EX31_RS07830		-1.5	-7.4	murein hydrolase activator NlpD
EX31_RS22250		-1.4	-2.4	ATP-dependent protease ATP-binding subunit ClpX
EX31_RS04390		-1.4	-2.2	DNA polymerase III subunit chi
EX31_RS18525		-1.3	-3.2	DNA translocase FtsK
EX31_RS11490		-1.3	-4.5	glycosyltransferase
EX31_RS23500		-1.3	-3.0	peptidoglycan-associated lipoprotein Pal
EX31_RS05825		-1.3	-1.7	mannitol-1-phosphate 5-dehydrogenase
EX31_RS15880		-1.3	-6.9	nitrogen regulation protein NR(I)
EX31_RS01805		-1.3	-1.9	hypothetical protein
EX31_RS02530		-1.2	-1.6	ABC transporter ATP-binding protein
EX31_RS22625		-1.2	-2.7	5-(carboxyamino)imidazole ribonucleotide mutase
EX31_RS23495		-1.2	-5.1	Tol-Pal system protein TolB
EX31_RS06955		-1.2	-2.3	hypothetical protein
EX31_RS03645		-1.2	-1.5	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
EX31_RS22245		-1.2	-1.9	ATP-dependent Clp endopeptidase proteolytic subunit ClpP
EX31_RS04035		-1.1	-8.2	phosphoserine phosphatase
EX31_RS07135		-1.1	-2.0	hypothetical protein
EX31_RS07415		-1.1	-0.9	bifunctional diguanylate cyclase/phosphodiesterase
EX31_RS02365		-1.1	-1.1	hypothetical protein
EX31_RS07340		-1.1	-1.3	stress-induced protein YchH
EX31_RS13045		-1.1	-7.1	bifunctional uridylyltransferase/uridylyl-removing protein GlnD
EX31_RS14005		-1.1	-1.9	4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
EX31_RS14410		-1.0	-9.0	glycosyltransferase family 9 protein
EX31_RS11540		-1.0	-2.5	dCTP deaminase
EX31_RS15095		-1.0	-2.2	O-antigen assembly polymerase
EX31_RS15655		-1.0	-2.0	hypothetical protein
EX31_RS20495		-1.0	-4.8	outer membrane protein assembly factor BamB
EX31_RS09580		-1.0	-1.2	flagellar motor switch protein FliN
EX31_RS14415		-1.0	-5.1	sugar glycosyltransferase
EX31_RS01960		-1.0	-2.6	DUF2931 family protein
EX31_RS02790		-1.0	-3.4	low molecular weight phosphotyrosine protein phosphatase
EX31_RS24145		-0.9	-3.5	UvrY/SirA/GacA family response regulator transcription factor
EX31_RS12875		-0.9	-1.8	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
EX31_RS07955		-0.9	-7.5	GTP diphosphokinase
EX31_RS06485		-0.9	-1.3	YdbL family protein
EX31_RS02515		-0.9	-1.0	PAS domain-containing protein
EX31_RS25895		-0.9	-2.2	DinI-like family protein
EX31_RS24300		-0.9	-1.4	DUF2971 domain-containing protein
EX31_RS18570		-0.9	-1.0	cold shock-like protein CspD
EX31_RS22810		-0.9	-2.5	helix-turn-helix domain-containing protein
EX31_RS17640		-0.8	-1.5	TetR/AcrR family transcriptional regulator
EX31_RS04325		-0.8	-0.9	hypothetical protein
EX31_RS09760		-0.8	-2.4	D-xylose ABC transporter substrate-binding protein
EX31_RS24365		-0.8	-3.0	response regulator transcription factor
EX31_RS02295		-0.8	-2.0	gluconate 2-dehydrogenase subunit 3 family protein
EX31_RS21470		-0.8	-5.4	phosphoglycerate dehydrogenase
EX31_RS17100		-0.8	-2.0	colicin immunity protein Cui
EX31_RS07525		-0.8	-2.2	sulfurtransferase
EX31_RS25225		-0.8	-2.2	hypothetical protein
EX31_RS01955		-0.8	-2.1	DUF2931 family protein
EX31_RS10595		-0.8	-2.1	ribonuclease D
EX31_RS11675		-0.8	-1.4	Holliday junction branch migration protein RuvA
EX31_RS14340		-0.8	-0.9	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
EX31_RS01965		-0.8	-2.7	DUF2931 family protein
EX31_RS11280		-0.8	-2.3	flagellar basal body P-ring protein FlgI
EX31_RS06690		-0.7	-1.7	hypothetical protein
EX31_RS12520		-0.7	-5.6	aerobic respiration two-component sensor histidine kinase ArcB
EX31_RS10000		-0.7	-3.3	UPF0259 family protein
EX31_RS22320		-0.7	-5.1	ammonium transporter AmtB
EX31_RS12385		-0.7	-5.8	RNase adapter RapZ
EX31_RS10145		-0.7	-2.0	ABC transporter permease
EX31_RS11480		-0.7	-3.3	ABC transporter permease
EX31_RS16425		-0.7	-2.6	DUF421 domain-containing protein
EX31_RS10340		-0.7	-2.0	GNAT family N-acetyltransferase
EX31_RS00930		-0.7	-3.2	glycosyltransferase family 9 protein
EX31_RS24880		-0.7	-6.2	carboxy terminal-processing peptidase
EX31_RS03570		-0.7	-1.6	DUF721 domain-containing protein
EX31_RS00760		-0.7	-2.6	glutathione S-transferase
EX31_RS01970		-0.7	-0.9	hypothetical protein
EX31_RS11510		-0.7	-3.6	dTDP-4-dehydrorhamnose 3,5-epimerase
EX31_RS13480		-0.7	-3.0	site-specific tyrosine recombinase XerD
EX31_RS07105		-0.7	-1.3	DUF3811 domain-containing protein
EX31_RS20735		-0.7	-1.8	exodeoxyribonuclease V subunit beta
EX31_RS02775		-0.7	-2.2	hypothetical protein
EX31_RS20405		-0.7	-3.2	class I SAM-dependent methyltransferase
EX31_RS00010		-0.6	-1.5	type II toxin-antitoxin system HipA family toxin
EX31_RS00490		-0.6	-2.2	paraquat-inducible protein A
EX31_RS02195		-0.6	-1.9	MarR family transcriptional regulator
EX31_RS22680		-0.6	-3.5	polyphosphate kinase 1
EX31_RS18405		-0.6	-3.3	hypothetical protein
EX31_RS12550		-0.6	-3.8	16S rRNA (cytidine(1402)-2'-O)-methyltransferase
EX31_RS02910		-0.6	-3.1	hypothetical protein
EX31_RS08515		-0.6	-5.4	lipoprotein NlpI
EX31_RS20865		-0.6	-1.6	bacteriocin immunity protein
EX31_RS18935		-0.6	-3.0	sugar phosphotransferase
EX31_RS10180		-0.6	-0.8	type II 3-dehydroquinate dehydratase
EX31_RS25105		-0.6	-1.1	DUF2474 domain-containing protein
EX31_RS24480		-0.6	-1.2	purine nucleoside phosphoramidase
EX31_RS20140		-0.6	-1.7	hypothetical protein
EX31_RS04285		-0.6	-2.4	hypothetical protein
EX31_RS02885		-0.6	-3.1	glycosyltransferase family 2 protein
EX31_RS08730		-0.6	-2.9	iron-sulfur cluster repair protein YtfE
EX31_RS00280		-0.6	-2.1	N-acetyltransferase
EX31_RS19150		-0.6	-3.0	hypothetical protein
EX31_RS03315		-0.6	-1.9	type VI secretion system tube protein Hcp
EX31_RS09985		-0.6	-2.1	BON domain-containing protein
EX31_RS21345		-0.6	-2.1	fimbria/pilus periplasmic chaperone
EX31_RS15755		-0.6	-3.5	hypothetical protein
EX31_RS10590		-0.6	-1.0	cell division topological specificity factor MinE
EX31_RS24280		-0.6	-2.2	hypothetical protein
EX31_RS09315		-0.6	-3.0	nitrate reductase subunit beta
EX31_RS22265		-0.6	-4.0	peptidylprolyl isomerase
EX31_RS23245		-0.6	-4.9	asparagine synthase B
EX31_RS09535		-0.6	-1.6	flagellar hook-basal body complex protein FliE
EX31_RS10380		-0.5	-2.4	DUF4440 domain-containing protein
EX31_RS11205		-0.5	-2.3	chemotaxis protein CheV
EX31_RS24655		-0.5	-1.7	hypothetical protein
EX31_RS15055		-0.5	-4.8	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
EX31_RS02625		-0.5	-1.3	hypothetical protein
EX31_RS18470		-0.5	-2.3	pyruvate formate lyase 1-activating protein
EX31_RS05160		-0.5	-3.3	16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ
EX31_RS02760		-0.5	-3.4	glycosyltransferase
EX31_RS24450		-0.5	-1.3	aminodeoxychorismate lyase
EX31_RS14730		-0.5	-0.6	DUF2756 domain-containing protein
EX31_RS15165		-0.5	-2.6	tyrosine recombinase XerC
EX31_RS03075		-0.5	-3.0	LysR family transcriptional regulator
EX31_RS14550		-0.5	-1.2	Trk system potassium transporter TrkH
EX31_RS25910		-0.5	-0.8	hypothetical protein
EX31_RS00470		-0.5	-1.9	PadR family transcriptional regulator
EX31_RS01905		-0.5	-1.9	hypothetical protein
EX31_RS01920		-0.5	-1.3	hypothetical protein
EX31_RS19575		-0.5	-3.9	colicin V production protein
EX31_RS25290		-0.5	-1.3	hypothetical protein
EX31_RS16625		-0.5	-0.7	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase
EX31_RS25075		-0.5	-2.1	KTSC domain-containing protein
EX31_RS20450		-0.5	-2.7	IMP dehydrogenase
EX31_RS23945		-0.5	-2.4	ABC transporter ATP-binding protein
EX31_RS16615		-0.5	-1.4	membrane protein
EX31_RS20410		-0.5	-1.5	hypothetical protein
EX31_RS07965		-0.5	-4.4	two-component sensor histidine kinase BarA
EX31_RS17835		-0.5	-1.6	PTS transporter subunit EIIB
EX31_RS02930		-0.5	-1.9	protein-tyrosine-phosphatase
EX31_RS24185		-0.5	-2.5	DNA-binding transcriptional repressor DeoR
EX31_RS18420		-0.5	-2.3	hypothetical protein
EX31_RS00985		-0.5	-1.1	type VI secretion protein
EX31_RS16385		-0.5	-1.2	adenosylmethionine decarboxylase
EX31_RS14765		-0.5	-3.2	type VI secretion system tube protein Hcp
EX31_RS12945		-0.5	-3.0	VOC family protein
EX31_RS07360		-0.5	-1.8	protease modulator HflC
EX31_RS22175		-0.5	-2.3	protein deglycase YajL
EX31_RS09705		-0.5	-2.1	HAD-IB family hydrolase
EX31_RS06755		-0.5	-1.9	histidine ammonia-lyase
EX31_RS05685		-0.5	-2.8	hypothetical protein
EX31_RS02165		-0.5	-2.5	hypothetical protein
EX31_RS06245		-0.5	-1.7	hypothetical protein
EX31_RS11150		-0.5	-0.9	efflux transporter periplasmic adaptor subunit
EX31_RS01300		-0.5	-2.9	alpha,alpha-trehalose-phosphate synthase
EX31_RS02270		-0.5	-1.4	transcriptional regulator ChbR
EX31_RS23490		-0.5	-1.0	cell envelope integrity protein TolA
EX31_RS08825		-0.5	-3.7	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
EX31_RS16675		-0.5	-1.4	histidine utilization repressor
EX31_RS09585		-0.5	-1.1	flagellar biosynthetic protein FliO
EX31_RS15875		-0.5	-3.4	nitrogen regulation protein NR(II)
EX31_RS25575		-0.5	-2.1	hypothetical protein
EX31_RS10795		-0.5	-2.2	HlyD family secretion protein
EX31_RS02905		-0.5	-2.4	right-handed parallel beta-helix repeat-containing protein
EX31_RS25450		-0.5	-1.6	helix-turn-helix domain-containing protein
EX31_RS01485		-0.5	-1.2	helix-turn-helix domain-containing protein
EX31_RS25010		-0.5	-1.5	hypothetical protein
EX31_RS23785		-0.5	-1.2	DUF262 domain-containing protein
EX31_RS09725		-0.5	-2.5	PQQ-dependent sugar dehydrogenase
EX31_RS20940		-0.4	-1.2	AlpA family transcriptional regulator
EX31_RS05245		-0.4	-1.3	PTS sugar transporter subunit IIB
EX31_RS18845		-0.4	-2.5	3-isopropylmalate dehydratase small subunit
EX31_RS10835		-0.4	-2.0	TolC family protein
EX31_RS22620		-0.4	-1.8	5-(carboxyamino)imidazole ribonucleotide synthase
EX31_RS03330		-0.4	-1.3	hypoxanthine phosphoribosyltransferase
EX31_RS22665		-0.4	-1.7	DUF2633 family protein
EX31_RS18680		-0.4	-3.3	galactose/methyl galactoside ABC transporter ATP-binding protein MglA

Specific Phenotypes

For 11 genes in this experiment