Experiment set4S170 for Rahnella sp. WP5

200 most important genes:

gene	name	fitness	t score	description
EX31_RS11525		-3.7	-4.4	UTP--glucose-1-phosphate uridylyltransferase GalU
EX31_RS23490		-3.3	-2.3	cell envelope integrity protein TolA
EX31_RS16655		-2.3	-2.4	hypothetical protein
EX31_RS18255		-2.3	-4.1	3-phosphoserine/phosphohydroxythreonine transaminase
EX31_RS08140		-2.2	-4.1	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
EX31_RS03250		-2.1	-10.0	RNA polymerase-binding protein DksA
EX31_RS18525		-2.0	-4.1	DNA translocase FtsK
EX31_RS23320		-2.0	-6.1	alpha-D-glucose phosphate-specific phosphoglucomutase
EX31_RS14400		-1.9	-5.3	ADP-heptose--LPS heptosyltransferase RfaF
EX31_RS21020		-1.9	-1.8	D-sedoheptulose 7-phosphate isomerase
EX31_RS02520		-1.9	-1.3	sigma-54-dependent Fis family transcriptional regulator
EX31_RS14445		-1.8	-7.5	glycosyltransferase family 2 protein
EX31_RS21895		-1.8	-12.9	phosphoribosylformylglycinamidine synthase
EX31_RS16860		-1.7	-13.6	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
EX31_RS04105		-1.7	-3.2	helix-turn-helix domain-containing protein
EX31_RS22695		-1.7	-7.5	phosphoribosylformylglycinamidine cyclo-ligase
EX31_RS11840		-1.6	-9.9	diacylglycerol kinase
EX31_RS22430		-1.6	-1.8	hemolysin expression modulator Hha
EX31_RS05825		-1.6	-1.8	mannitol-1-phosphate 5-dehydrogenase
EX31_RS23480		-1.5	-4.4	Tol-Pal system protein TolQ
EX31_RS14435		-1.5	-7.5	glycosyltransferase family 4 protein
EX31_RS01885		-1.4	-2.5	type IV secretion protein Rhs
EX31_RS23500		-1.4	-4.4	peptidoglycan-associated lipoprotein Pal
EX31_RS04390		-1.4	-2.8	DNA polymerase III subunit chi
EX31_RS12400		-1.4	-1.6	RNA polymerase factor sigma-54
EX31_RS25095		-1.4	-2.7	hypothetical protein
EX31_RS11510		-1.4	-6.1	dTDP-4-dehydrorhamnose 3,5-epimerase
EX31_RS16855		-1.3	-9.3	phosphoribosylamine--glycine ligase
EX31_RS23485		-1.3	-2.5	colicin uptake protein TolR
EX31_RS07830		-1.3	-6.2	murein hydrolase activator NlpD
EX31_RS15870		-1.3	-2.1	glutamate--ammonia ligase
EX31_RS14410		-1.3	-11.7	glycosyltransferase family 9 protein
EX31_RS25070		-1.3	-3.1	DUF551 domain-containing protein
EX31_RS23990		-1.3	-1.6	SDR family NAD(P)-dependent oxidoreductase
EX31_RS06955		-1.2	-3.6	hypothetical protein
EX31_RS13045		-1.2	-8.1	bifunctional uridylyltransferase/uridylyl-removing protein GlnD
EX31_RS23495		-1.2	-5.1	Tol-Pal system protein TolB
EX31_RS15085		-1.2	-3.0	lipid III flippase WzxE
EX31_RS06245		-1.2	-3.6	hypothetical protein
EX31_RS19570		-1.2	-8.4	amidophosphoribosyltransferase
EX31_RS09080		-1.2	-1.6	LysR family transcriptional regulator
EX31_RS03790		-1.2	-2.2	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
EX31_RS03645		-1.1	-1.7	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
EX31_RS09580		-1.1	-1.3	flagellar motor switch protein FliN
EX31_RS20735		-1.1	-3.1	exodeoxyribonuclease V subunit beta
EX31_RS22245		-1.1	-1.8	ATP-dependent Clp endopeptidase proteolytic subunit ClpP
EX31_RS15880		-1.1	-5.2	nitrogen regulation protein NR(I)
EX31_RS23470		-1.1	-2.0	cyd operon protein YbgE
EX31_RS04035		-1.1	-7.5	phosphoserine phosphatase
EX31_RS14415		-1.0	-6.1	sugar glycosyltransferase
EX31_RS15095		-1.0	-2.1	O-antigen assembly polymerase
EX31_RS14730		-1.0	-1.0	DUF2756 domain-containing protein
EX31_RS12875		-1.0	-2.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
EX31_RS01920		-1.0	-2.3	hypothetical protein
EX31_RS11490		-1.0	-3.3	glycosyltransferase
EX31_RS11675		-1.0	-1.9	Holliday junction branch migration protein RuvA
EX31_RS07440		-0.9	-1.5	urea carboxylase-associated family protein
EX31_RS02515		-0.9	-1.2	PAS domain-containing protein
EX31_RS20410		-0.9	-3.3	hypothetical protein
EX31_RS23560		-0.9	-2.4	phosphate starvation-inducible protein
EX31_RS06890		-0.9	-3.5	isopenicillin N synthase family oxygenase
EX31_RS11480		-0.9	-3.8	ABC transporter permease
EX31_RS03570		-0.9	-1.3	DUF721 domain-containing protein
EX31_RS26000		-0.9	-1.8	GntR family transcriptional regulator
EX31_RS25295		-0.9	-1.3	GhoT/OrtT family toxin
EX31_RS14405		-0.9	-1.6	lipopolysaccharide heptosyltransferase RfaC
EX31_RS07955		-0.8	-7.2	GTP diphosphokinase
EX31_RS22750		-0.8	-2.5	phosphoribosylaminoimidazolesuccinocarboxamide synthase
EX31_RS25025		-0.8	-1.3	DUF1272 domain-containing protein
EX31_RS11500		-0.8	-1.9	glycosyltransferase family 2 protein
EX31_RS18540		-0.8	-0.5	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
EX31_RS23785		-0.8	-2.4	DUF262 domain-containing protein
EX31_RS18440		-0.8	-2.9	TraR/DksA family transcriptional regulator
EX31_RS01955		-0.8	-1.8	DUF2931 family protein
EX31_RS17460		-0.8	-2.2	putative selenoprotein
EX31_RS07475		-0.8	-0.9	hypothetical protein
EX31_RS22320		-0.8	-5.2	ammonium transporter AmtB
EX31_RS15165		-0.8	-3.9	tyrosine recombinase XerC
EX31_RS17100		-0.8	-1.8	colicin immunity protein Cui
EX31_RS18450		-0.8	-1.4	hypothetical protein
EX31_RS10535		-0.8	-1.5	GtrA family protein
EX31_RS26085		-0.8	-2.0	alpha/beta hydrolase
EX31_RS16385		-0.8	-2.4	adenosylmethionine decarboxylase
EX31_RS09190		-0.8	-1.9	ABC transporter permease
EX31_RS11110		-0.7	-1.6	RidA family protein
EX31_RS10180		-0.7	-1.2	type II 3-dehydroquinate dehydratase
EX31_RS09170		-0.7	-2.2	ABC transporter ATP-binding protein
EX31_RS12385		-0.7	-5.9	RNase adapter RapZ
EX31_RS18550		-0.7	-2.8	leucyl/phenylalanyl-tRNA--protein transferase
EX31_RS18935		-0.7	-3.2	sugar phosphotransferase
EX31_RS09210		-0.7	-2.3	hypothetical protein
EX31_RS08745		-0.7	-0.9	50S ribosomal protein L9
EX31_RS25290		-0.7	-2.0	hypothetical protein
EX31_RS24880		-0.7	-6.3	carboxy terminal-processing peptidase
EX31_RS08515		-0.7	-6.0	lipoprotein NlpI
EX31_RS06970		-0.7	-2.4	mannose-6-phosphate isomerase
EX31_RS25410		-0.7	-0.9	transposase
EX31_RS20495		-0.6	-3.2	outer membrane protein assembly factor BamB
EX31_RS14320		-0.6	-1.5	envelope stress response regulator transcription factor CpxR
EX31_RS22680		-0.6	-3.6	polyphosphate kinase 1
EX31_RS02140		-0.6	-2.3	DUF1852 domain-containing protein
EX31_RS24145		-0.6	-2.9	UvrY/SirA/GacA family response regulator transcription factor
EX31_RS21470		-0.6	-3.8	phosphoglycerate dehydrogenase
EX31_RS07055		-0.6	-2.9	carbohydrate ABC transporter permease
EX31_RS09760		-0.6	-2.3	D-xylose ABC transporter substrate-binding protein
EX31_RS13815		-0.6	-0.9	ribonuclease T
EX31_RS18625		-0.6	-1.4	heavy metal-binding domain-containing protein
EX31_RS08210		-0.6	-2.8	hypothetical protein
EX31_RS07540		-0.6	-1.9	helix-turn-helix transcriptional regulator
EX31_RS18945		-0.6	-2.1	CatB-related O-acetyltransferase
EX31_RS09065		-0.6	-1.7	molecular chaperone
EX31_RS02625		-0.6	-1.3	hypothetical protein
EX31_RS04295		-0.6	-2.4	hypothetical protein
EX31_RS09290		-0.6	-1.3	hypothetical protein
EX31_RS07245		-0.6	-2.2	ABC transporter ATP-binding protein
EX31_RS10020		-0.6	-0.6	YciI family protein
EX31_RS13480		-0.6	-2.7	site-specific tyrosine recombinase XerD
EX31_RS22625		-0.6	-1.4	5-(carboxyamino)imidazole ribonucleotide mutase
EX31_RS24310		-0.6	-2.2	hypothetical protein
EX31_RS07470		-0.6	-0.7	hypothetical protein
EX31_RS22145		-0.6	-1.4	phosphatidylglycerophosphatase A
EX31_RS12585		-0.6	-3.3	hypothetical protein
EX31_RS04320		-0.6	-1.4	hypothetical protein
EX31_RS12600		-0.6	-2.1	pilus assembly protein
EX31_RS17615		-0.6	-1.2	hypothetical protein
EX31_RS05160		-0.6	-3.5	16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ
EX31_RS20405		-0.6	-2.6	class I SAM-dependent methyltransferase
EX31_RS15055		-0.5	-4.9	UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase
EX31_RS09605		-0.5	-1.9	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
EX31_RS13870		-0.5	-0.8	pyruvate kinase PykF
EX31_RS00450		-0.5	-1.8	methionine-R-sulfoxide reductase
EX31_RS09295		-0.5	-2.3	D-amino-acid transaminase
EX31_RS15905		-0.5	-4.4	DNA polymerase I
EX31_RS06920		-0.5	-2.3	GlxA family transcriptional regulator
EX31_RS21145		-0.5	-1.9	oxalurate catabolism protein HpxZ
EX31_RS10575		-0.5	-1.7	hypothetical protein
EX31_RS10000		-0.5	-2.5	UPF0259 family protein
EX31_RS06550		-0.5	-1.5	two-component system response regulator NarL
EX31_RS25245		-0.5	-2.0	late control protein B
EX31_RS01660		-0.5	-1.7	hypothetical protein
EX31_RS05245		-0.5	-1.4	PTS sugar transporter subunit IIB
EX31_RS18040		-0.5	-4.3	porin OmpA
EX31_RS07430		-0.5	-1.9	transporter substrate-binding domain-containing protein
EX31_RS10620		-0.5	-1.6	RidA family protein
EX31_RS19575		-0.5	-3.7	colicin V production protein
EX31_RS00130		-0.5	-1.5	GGDEF domain-containing protein
EX31_RS09535		-0.5	-1.4	flagellar hook-basal body complex protein FliE
EX31_RS10035		-0.5	-0.8	cardiolipin synthase
EX31_RS10105		-0.5	-2.6	patatin-like phospholipase RssA
EX31_RS00010		-0.5	-1.0	type II toxin-antitoxin system HipA family toxin
EX31_RS25690		-0.5	-0.9	tyrosine-type recombinase/integrase
EX31_RS13740		-0.5	-1.1	glutathione transferase GstA
EX31_RS13745		-0.5	-2.1	pyridoxal kinase PdxY
EX31_RS01515		-0.5	-1.6	DinI-like family protein
EX31_RS05220		-0.5	-2.0	hypothetical protein
EX31_RS10430		-0.5	-2.2	5-oxoprolinase subunit PxpB
EX31_RS23880		-0.5	-1.8	DUF1471 domain-containing protein
EX31_RS12520		-0.5	-3.5	aerobic respiration two-component sensor histidine kinase ArcB
EX31_RS20880		-0.5	-1.9	hypothetical protein
EX31_RS01700		-0.5	-1.3	chromosome partitioning protein ParB
EX31_RS06675		-0.5	-2.4	cellulose biosynthesis protein BcsG
EX31_RS01695		-0.5	-0.8	RusA family crossover junction endodeoxyribonuclease
EX31_RS24385		-0.5	-1.5	dihydroorotase
EX31_RS22800		-0.5	-1.3	ArsC family reductase
EX31_RS15075		-0.5	-3.4	dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
EX31_RS06895		-0.5	-1.6	HlyD family secretion protein
EX31_RS02130		-0.5	-1.5	amino acid-binding protein
EX31_RS11200		-0.5	-1.3	alpha/beta fold hydrolase
EX31_RS02755		-0.4	-2.1	hypothetical protein
EX31_RS06940		-0.4	-2.2	HD domain-containing protein
EX31_RS24260		-0.4	-1.2	YceK/YidQ family lipoprotein
EX31_RS17390		-0.4	-2.1	succinylglutamate desuccinylase
EX31_RS02050		-0.4	-2.4	LuxR family transcriptional regulator
EX31_RS02910		-0.4	-2.5	hypothetical protein
EX31_RS15875		-0.4	-3.4	nitrogen regulation protein NR(II)
EX31_RS20020		-0.4	-2.0	GNAT family N-acetyltransferase
EX31_RS16460		-0.4	-2.6	antibiotic biosynthesis monooxygenase
EX31_RS01510		-0.4	-1.4	DinI-like family protein
EX31_RS04805		-0.4	-3.1	type 1 fimbrial protein
EX31_RS06635		-0.4	-1.7	L-arabinose isomerase
EX31_RS06695		-0.4	-2.7	cellulose synthase operon protein YhjQ
EX31_RS23630		-0.4	-1.9	transcriptional regulator
EX31_RS17790		-0.4	-0.9	citrate lyase acyl carrier protein
EX31_RS12550		-0.4	-2.8	16S rRNA (cytidine(1402)-2'-O)-methyltransferase
EX31_RS14520		-0.4	-2.0	DUF2971 domain-containing protein
EX31_RS02970		-0.4	-2.2	helix-turn-helix transcriptional regulator
EX31_RS25695		-0.4	-2.1	DUF1883 domain-containing protein
EX31_RS16675		-0.4	-1.6	histidine utilization repressor
EX31_RS11290		-0.4	-2.2	flagellar basal-body rod protein FlgG
EX31_RS02480		-0.4	-2.1	acyl-CoA/acyl-ACP dehydrogenase
EX31_RS14550		-0.4	-1.0	Trk system potassium transporter TrkH
EX31_RS24995		-0.4	-2.9	hypothetical protein
EX31_RS00050		-0.4	-1.8	ABC transporter ATP-binding protein
EX31_RS08730		-0.4	-2.0	iron-sulfur cluster repair protein YtfE
EX31_RS17985		-0.4	-1.1	acylphosphatase
EX31_RS23245		-0.4	-3.7	asparagine synthase B
EX31_RS10595		-0.4	-1.6	ribonuclease D
EX31_RS07290		-0.4	-2.0	C4-dicarboxylic acid transporter DauA
EX31_RS09350		-0.4	-0.9	ATP-binding cassette domain-containing protein
EX31_RS21280		-0.4	-0.9	hydroxymyristoyl-ACP dehydratase

Specific Phenotypes

For 15 genes in this experiment