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Experiment set4S116 for
Rahnella sp. WP5
Compare to:
Go
NLN
200 most important genes:
gene
name
fitness
t score
description
EX31
_RS04105
-3.7
-3.6
helix-turn-helix domain-containing protein
compare
EX31
_RS21470
-3.6
-13.3
phosphoglycerate dehydrogenase
compare
EX31
_RS14335
-3.6
-3.5
serine O-acetyltransferase
compare
EX31
_RS14405
-3.5
-3.4
lipopolysaccharide heptosyltransferase RfaC
compare
EX31
_RS08140
-3.5
-3.4
bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
compare
EX31
_RS18255
-3.5
-5.3
3-phosphoserine/phosphohydroxythreonine transaminase
compare
EX31
_RS12510
-3.4
-17.6
FAD-dependent oxidoreductase
compare
EX31
_RS11455
-3.3
-7.0
imidazole glycerol phosphate synthase subunit HisH
compare
EX31
_RS15880
-3.3
-12.0
nitrogen regulation protein NR(I)
compare
EX31
_RS03835
-3.3
-12.5
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
compare
EX31
_RS22625
-3.2
-3.9
5-(carboxyamino)imidazole ribonucleotide mutase
compare
EX31
_RS21895
-3.2
-18.5
phosphoribosylformylglycinamidine synthase
compare
EX31
_RS23245
-3.2
-21.3
asparagine synthase B
compare
EX31
_RS04035
-3.1
-14.0
phosphoserine phosphatase
compare
EX31
_RS21020
-3.1
-3.6
D-sedoheptulose 7-phosphate isomerase
compare
EX31
_RS04645
-3.1
-1.8
DUF2559 family protein
compare
EX31
_RS13445
-3.0
-18.5
argininosuccinate synthase
compare
EX31
_RS16855
-3.0
-14.8
phosphoribosylamine--glycine ligase
compare
EX31
_RS16860
-3.0
-19.2
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
compare
EX31
_RS03690
-3.0
-14.8
3-isopropylmalate dehydratase large subunit
compare
EX31
_RS03685
-2.9
-15.9
3-isopropylmalate dehydrogenase
compare
EX31
_RS14185
-2.9
-11.7
acetylglutamate kinase
compare
EX31
_RS14180
-2.9
-17.3
argininosuccinate lyase
compare
EX31
_RS24385
-2.9
-5.5
dihydroorotase
compare
EX31
_RS07590
-2.9
-4.4
bifunctional chorismate mutase/prephenate dehydrogenase
compare
EX31
_RS12515
-2.9
-23.8
glutamate synthase large subunit
compare
EX31
_RS13275
-2.8
-13.9
diaminopimelate decarboxylase
compare
EX31
_RS18095
-2.8
-7.7
quinone-dependent dihydroorotate dehydrogenase
compare
EX31
_RS23320
-2.8
-6.8
alpha-D-glucose phosphate-specific phosphoglucomutase
compare
EX31
_RS25370
-2.7
-17.0
HTH-type transcriptional regulator MetR
compare
EX31
_RS11470
-2.7
-6.2
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
compare
EX31
_RS19570
-2.7
-12.6
amidophosphoribosyltransferase
compare
EX31
_RS14190
-2.7
-12.2
N-acetyl-gamma-glutamyl-phosphate reductase
compare
EX31
_RS15020
-2.7
-17.4
ketol-acid reductoisomerase
compare
EX31
_RS02690
-2.6
-7.8
pyrroline-5-carboxylate reductase
compare
EX31
_RS03935
-2.6
-13.2
threonine synthase
compare
EX31
_RS11460
-2.6
-3.6
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
compare
EX31
_RS03830
-2.6
-16.4
carbamoyl-phosphate synthase large subunit
compare
EX31
_RS14200
-2.6
-17.8
phosphoenolpyruvate carboxylase
compare
EX31
_RS13160
-2.6
-13.6
amino-acid N-acetyltransferase
compare
EX31
_RS23485
-2.6
-3.5
colicin uptake protein TolR
compare
EX31
_RS15005
-2.6
-18.1
dihydroxy-acid dehydratase
compare
EX31
_RS20975
-2.5
-8.1
glutamate-5-semialdehyde dehydrogenase
compare
EX31
_RS22750
-2.5
-5.1
phosphoribosylaminoimidazolesuccinocarboxamide synthase
compare
EX31
_RS11735
-2.5
-12.3
homoserine O-succinyltransferase
compare
EX31
_RS22620
-2.4
-7.3
5-(carboxyamino)imidazole ribonucleotide synthase
compare
EX31
_RS20980
-2.4
-7.2
glutamate 5-kinase
compare
EX31
_RS09960
-2.4
-8.1
glutamine amidotransferase
compare
EX31
_RS23415
-2.4
-10.2
citrate synthase
compare
EX31
_RS12825
-2.4
-8.8
ornithine carbamoyltransferase
compare
EX31
_RS11465
-2.3
-8.0
imidazole glycerol phosphate synthase subunit HisF
compare
EX31
_RS23480
-2.3
-4.9
Tol-Pal system protein TolQ
compare
EX31
_RS22695
-2.3
-8.6
phosphoribosylformylglycinamidine cyclo-ligase
compare
EX31
_RS03035
-2.3
-11.4
LysE family transporter
compare
EX31
_RS08150
-2.3
-14.7
inorganic triphosphatase
compare
EX31
_RS03940
-2.3
-12.0
homoserine kinase
compare
EX31
_RS20450
-2.3
-8.4
IMP dehydrogenase
compare
EX31
_RS14215
-2.3
-16.8
cystathionine gamma-synthase
compare
EX31
_RS23500
-2.3
-4.8
peptidoglycan-associated lipoprotein Pal
compare
EX31
_RS03695
-2.3
-7.1
3-isopropylmalate dehydratase small subunit
compare
EX31
_RS09970
-2.2
-9.9
bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF
compare
EX31
_RS14340
-2.2
-2.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
compare
EX31
_RS18530
-2.2
-13.7
leucine-responsive transcriptional regulator Lrp
compare
EX31
_RS09955
-2.2
-9.6
anthranilate synthase component 1
compare
EX31
_RS09855
-2.2
-4.0
orotidine-5'-phosphate decarboxylase
compare
EX31
_RS09980
-2.2
-8.0
tryptophan synthase subunit alpha
compare
EX31
_RS10100
-2.2
-3.6
two-component system response regulator RssB
compare
EX31
_RS09975
-2.2
-8.6
tryptophan synthase subunit beta
compare
EX31
_RS09965
-2.2
-7.5
anthranilate phosphoribosyltransferase
compare
EX31
_RS03680
-2.1
-11.8
2-isopropylmalate synthase
compare
EX31
_RS12785
-2.1
-10.1
aspartate carbamoyltransferase
compare
EX31
_RS11445
-2.1
-10.0
histidinol-phosphate transaminase
compare
EX31
_RS22250
-2.1
-2.5
ATP-dependent protease ATP-binding subunit ClpX
compare
EX31
_RS14310
-2.0
-5.2
6-phosphofructokinase
compare
EX31
_RS23495
-2.0
-6.8
Tol-Pal system protein TolB
compare
EX31
_RS13045
-2.0
-11.1
bifunctional uridylyltransferase/uridylyl-removing protein GlnD
compare
EX31
_RS11440
-2.0
-6.7
histidinol dehydrogenase
compare
EX31
_RS07895
-1.9
-9.8
phosphoadenylyl-sulfate reductase
compare
EX31
_RS05785
-1.9
-3.9
superoxide dismutase [Mn]
compare
EX31
_RS07585
-1.9
-7.8
bifunctional chorismate mutase/prephenate dehydratase
compare
EX31
_RS03250
-1.9
-9.6
RNA polymerase-binding protein DksA
compare
EX31
_RS04710
-1.9
-5.1
adenine-specific DNA-methyltransferase
compare
EX31
_RS11450
-1.9
-7.6
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB
compare
EX31
_RS03030
-1.9
-11.1
helix-turn-helix transcriptional regulator
compare
EX31
_RS22430
-1.9
-2.1
hemolysin expression modulator Hha
compare
EX31
_RS15085
-1.9
-4.8
lipid III flippase WzxE
compare
EX31
_RS04390
-1.8
-2.5
DNA polymerase III subunit chi
compare
EX31
_RS02365
-1.8
-1.7
hypothetical protein
compare
EX31
_RS03945
-1.8
-14.3
bifunctional aspartate kinase/homoserine dehydrogenase I
compare
EX31
_RS25910
-1.7
-1.6
hypothetical protein
compare
EX31
_RS15875
-1.7
-10.5
nitrogen regulation protein NR(II)
compare
EX31
_RS09890
-1.6
-9.4
HTH-type transcriptional regulator CysB
compare
EX31
_RS14500
-1.6
-8.4
orotate phosphoribosyltransferase
compare
EX31
_RS15870
-1.6
-2.6
glutamate--ammonia ligase
compare
EX31
_RS07870
-1.6
-8.4
adenylyl-sulfate kinase
compare
EX31
_RS13815
-1.6
-1.6
ribonuclease T
compare
EX31
_RS02520
-1.6
-1.8
sigma-54-dependent Fis family transcriptional regulator
compare
EX31
_RS15010
-1.6
-9.8
threonine ammonia-lyase, biosynthetic
compare
EX31
_RS23490
-1.5
-2.7
cell envelope integrity protein TolA
compare
EX31
_RS17285
-1.5
-3.5
carboxy-S-adenosyl-L-methionine synthase CmoA
compare
EX31
_RS06485
-1.5
-2.7
YdbL family protein
compare
EX31
_RS11525
-1.5
-2.9
UTP--glucose-1-phosphate uridylyltransferase GalU
compare
EX31
_RS07905
-1.5
-11.6
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
compare
EX31
_RS08720
-1.4
-10.3
3'(2'),5'-bisphosphate nucleotidase CysQ
compare
EX31
_RS14710
-1.4
-12.5
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
compare
EX31
_RS07830
-1.4
-5.0
murein hydrolase activator NlpD
compare
EX31
_RS07900
-1.4
-11.1
assimilatory sulfite reductase (NADPH) hemoprotein subunit
compare
EX31
_RS07955
-1.4
-10.5
GTP diphosphokinase
compare
EX31
_RS20495
-1.4
-5.7
outer membrane protein assembly factor BamB
compare
EX31
_RS14445
-1.4
-5.2
glycosyltransferase family 2 protein
compare
EX31
_RS03790
-1.4
-2.3
bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
compare
EX31
_RS00920
-1.4
-2.3
DUF1493 family protein
compare
EX31
_RS12240
-1.4
-2.4
rod shape-determining protein MreC
compare
EX31
_RS06055
-1.4
-2.7
phosphate ABC transporter ATP-binding protein PstB
compare
EX31
_RS24600
-1.3
-2.0
hypothetical protein
compare
EX31
_RS20265
-1.3
-3.0
YaiI/YqxD family protein
compare
EX31
_RS05040
-1.3
-4.5
helix-turn-helix domain-containing protein
compare
EX31
_RS20175
-1.3
-8.5
cysteine synthase A
compare
EX31
_RS07875
-1.3
-10.9
sulfate adenylyltransferase subunit CysN
compare
EX31
_RS05825
-1.3
-1.7
mannitol-1-phosphate 5-dehydrogenase
compare
EX31
_RS14550
-1.3
-2.5
Trk system potassium transporter TrkH
compare
EX31
_RS10115
-1.2
-8.2
formyltetrahydrofolate deformylase
compare
EX31
_RS03400
-1.2
-5.1
bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
compare
EX31
_RS23440
-1.2
-2.1
2-oxoglutarate dehydrogenase E1 component
compare
EX31
_RS15095
-1.2
-2.6
O-antigen assembly polymerase
compare
EX31
_RS03955
-1.2
-4.2
two-component system response regulator ArcA
compare
EX31
_RS07785
-1.2
-1.5
carbon storage regulator CsrA
compare
EX31
_RS02540
-1.2
-2.5
helix-turn-helix transcriptional regulator
compare
EX31
_RS07880
-1.2
-10.2
sulfate adenylyltransferase subunit CysD
compare
EX31
_RS09995
-1.2
-2.8
YkgJ family cysteine cluster protein
compare
EX31
_RS03040
-1.2
-5.7
hypothetical protein
compare
EX31
_RS18525
-1.2
-3.0
DNA translocase FtsK
compare
EX31
_RS04630
-1.2
-8.9
aspartate aminotransferase family protein
compare
EX31
_RS25690
-1.2
-2.4
tyrosine-type recombinase/integrase
compare
EX31
_RS11675
-1.2
-2.6
Holliday junction branch migration protein RuvA
compare
EX31
_RS09670
-1.1
-1.9
bleomycin resistance protein
compare
EX31
_RS11480
-1.1
-4.0
ABC transporter permease
compare
EX31
_RS14325
-1.1
-8.1
envelope stress sensor histidine kinase CpxA
compare
EX31
_RS14435
-1.1
-5.2
glycosyltransferase family 4 protein
compare
EX31
_RS24855
-1.1
-3.1
16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
compare
EX31
_RS14400
-1.1
-3.6
ADP-heptose--LPS heptosyltransferase RfaF
compare
EX31
_RS14410
-1.1
-9.4
glycosyltransferase family 9 protein
compare
EX31
_RS18445
-1.1
-1.8
DUF2732 domain-containing protein
compare
EX31
_RS22245
-1.0
-1.8
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
compare
EX31
_RS12400
-1.0
-1.6
RNA polymerase factor sigma-54
compare
EX31
_RS11690
-1.0
-2.1
dihydroneopterin triphosphate diphosphatase
compare
EX31
_RS25725
-1.0
-2.1
hypothetical protein
compare
EX31
_RS20190
-1.0
-1.3
PTS glucose transporter subunit IIA
compare
EX31
_RS10590
-1.0
-1.6
cell division topological specificity factor MinE
compare
EX31
_RS18540
-1.0
-0.7
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
compare
EX31
_RS15000
-1.0
-7.4
branched-chain amino acid transaminase
compare
EX31
_RS11485
-1.0
-4.6
ABC transporter ATP-binding protein
compare
EX31
_RS11500
-0.9
-1.7
glycosyltransferase family 2 protein
compare
EX31
_RS02515
-0.9
-1.1
PAS domain-containing protein
compare
EX31
_RS08745
-0.9
-1.0
50S ribosomal protein L9
compare
EX31
_RS00380
-0.9
-2.3
ABC transporter ATP-binding protein
compare
EX31
_RS20670
-0.9
-1.0
RNA chaperone/antiterminator CspA
compare
EX31
_RS07135
-0.9
-1.5
hypothetical protein
compare
EX31
_RS02385
-0.9
-1.1
hypothetical protein
compare
EX31
_RS23990
-0.9
-1.0
SDR family NAD(P)-dependent oxidoreductase
compare
EX31
_RS09080
-0.9
-1.5
LysR family transcriptional regulator
compare
EX31
_RS09065
-0.9
-2.4
molecular chaperone
compare
EX31
_RS24725
-0.9
-4.8
aminodeoxychorismate synthase component 1
compare
EX31
_RS23160
-0.9
-2.2
amino acid ABC transporter ATP-binding protein
compare
EX31
_RS10580
-0.9
-2.9
septum site-determining protein MinC
compare
EX31
_RS09600
-0.9
-2.7
flagellar type III secretion system protein FliR
compare
EX31
_RS11540
-0.9
-2.2
dCTP deaminase
compare
EX31
_RS06150
-0.8
-7.0
transcriptional regulator AsnC
compare
EX31
_RS06065
-0.8
-4.6
phosphate ABC transporter permease PstC
compare
EX31
_RS14195
-0.8
-6.8
acetylornithine deacetylase
compare
EX31
_RS03775
-0.8
-2.0
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
compare
EX31
_RS16725
-0.8
-1.5
phytanoyl-CoA dioxygenase
compare
EX31
_RS07380
-0.8
-1.0
redox-regulated ATPase YchF
compare
EX31
_RS01970
-0.8
-1.1
hypothetical protein
compare
EX31
_RS24220
-0.8
-1.4
hypothetical protein
compare
EX31
_RS23470
-0.8
-1.4
cyd operon protein YbgE
compare
EX31
_RS10030
-0.8
-1.3
YciY family protein
compare
EX31
_RS04635
-0.8
-4.5
aminodeoxychorismate synthase component II
compare
EX31
_RS16615
-0.8
-2.0
membrane protein
compare
EX31
_RS20735
-0.8
-2.1
exodeoxyribonuclease V subunit beta
compare
EX31
_RS19655
-0.8
-3.1
beta-ketoacyl-ACP synthase I
compare
EX31
_RS08825
-0.8
-5.6
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
compare
EX31
_RS19610
-0.8
-3.5
4-phosphoerythronate dehydrogenase PdxB
compare
EX31
_RS09170
-0.8
-1.0
ABC transporter ATP-binding protein
compare
EX31
_RS24255
-0.8
-6.3
glucans biosynthesis glucosyltransferase MdoH
compare
EX31
_RS06985
-0.8
-1.8
iron export ABC transporter permease subunit FetB
compare
EX31
_RS05145
-0.8
-3.8
inorganic phosphate transporter PitA
compare
EX31
_RS25300
-0.7
-1.2
YqaE/Pmp3 family membrane protein
compare
EX31
_RS18480
-0.7
-2.9
ferredoxin-type protein NapF
compare
EX31
_RS15155
-0.7
-1.8
diaminopimelate epimerase
compare
EX31
_RS09585
-0.7
-1.6
flagellar biosynthetic protein FliO
compare
EX31
_RS14095
-0.7
-2.5
yfeABCD regulator yfeE
compare
EX31
_RS11840
-0.7
-5.2
diacylglycerol kinase
compare
EX31
_RS02525
-0.7
-3.6
ABC transporter permease
compare
EX31
_RS18040
-0.7
-5.5
porin OmpA
compare
EX31
_RS14205
-0.7
-5.1
methylenetetrahydrofolate reductase
compare
EX31
_RS25290
-0.7
-1.2
hypothetical protein
compare
EX31
_RS09295
-0.7
-3.1
D-amino-acid transaminase
compare
EX31
_RS19600
-0.7
-3.6
tRNA pseudouridine(38-40) synthase TruA
compare
EX31
_RS22320
-0.7
-4.4
ammonium transporter AmtB
compare
Specific Phenotypes
None in this experiment
For Rahnella sp. WP5 in nln experiments