Experiment set4S107 for Rahnella sp. WP5

200 most important genes:

gene	name	fitness	t score	description
EX31_RS11675		-5.5	-3.8	Holliday junction branch migration protein RuvA
EX31_RS04390		-4.7	-3.2	DNA polymerase III subunit chi
EX31_RS11525		-4.3	-3.0	UTP--glucose-1-phosphate uridylyltransferase GalU
EX31_RS25365		-4.1	-2.8	50S ribosomal protein L31
EX31_RS14405		-4.0	-2.8	lipopolysaccharide heptosyltransferase RfaC
EX31_RS23485		-3.8	-2.6	colicin uptake protein TolR
EX31_RS10090		-3.6	-3.5	NAD-dependent epimerase
EX31_RS03790		-3.4	-4.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
EX31_RS18255		-3.3	-4.9	3-phosphoserine/phosphohydroxythreonine transaminase
EX31_RS11540		-3.2	-5.3	dCTP deaminase
EX31_RS20180		-3.1	-2.0	phosphocarrier protein Hpr
EX31_RS20495		-3.1	-6.9	outer membrane protein assembly factor BamB
EX31_RS07380		-2.9	-2.8	redox-regulated ATPase YchF
EX31_RS12875		-2.8	-1.9	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
EX31_RS06000		-2.8	-5.6	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
EX31_RS21020		-2.8	-2.9	D-sedoheptulose 7-phosphate isomerase
EX31_RS25645		-2.6	-2.5	K(+)-transporting ATPase subunit F
EX31_RS10035		-2.6	-2.5	cardiolipin synthase
EX31_RS23500		-2.6	-5.2	peptidoglycan-associated lipoprotein Pal
EX31_RS14335		-2.6	-3.9	serine O-acetyltransferase
EX31_RS24385		-2.5	-5.0	dihydroorotase
EX31_RS23440		-2.4	-2.4	2-oxoglutarate dehydrogenase E1 component
EX31_RS13815		-2.4	-2.0	ribonuclease T
EX31_RS08140		-2.4	-3.6	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE
EX31_RS07590		-2.4	-3.6	bifunctional chorismate mutase/prephenate dehydrogenase
EX31_RS20450		-2.3	-7.1	IMP dehydrogenase
EX31_RS05825		-2.3	-1.6	mannitol-1-phosphate 5-dehydrogenase
EX31_RS20735		-2.3	-3.7	exodeoxyribonuclease V subunit beta
EX31_RS23480		-2.2	-5.0	Tol-Pal system protein TolQ
EX31_RS23320		-2.2	-4.7	alpha-D-glucose phosphate-specific phosphoglucomutase
EX31_RS23490		-2.2	-2.9	cell envelope integrity protein TolA
EX31_RS20185		-2.2	-4.8	phosphoenolpyruvate-protein phosphotransferase PtsI
EX31_RS06140		-2.1	-9.8	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
EX31_RS15870		-2.1	-1.4	glutamate--ammonia ligase
EX31_RS15165		-2.1	-5.0	tyrosine recombinase XerC
EX31_RS03220		-2.0	-2.8	Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC
EX31_RS23495		-2.0	-6.3	Tol-Pal system protein TolB
EX31_RS07475		-2.0	-1.7	hypothetical protein
EX31_RS22245		-2.0	-1.4	ATP-dependent Clp endopeptidase proteolytic subunit ClpP
EX31_RS20670		-2.0	-1.4	RNA chaperone/antiterminator CspA
EX31_RS22250		-2.0	-1.9	ATP-dependent protease ATP-binding subunit ClpX
EX31_RS03400		-2.0	-5.8	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
EX31_RS13045		-1.9	-10.3	bifunctional uridylyltransferase/uridylyl-removing protein GlnD
EX31_RS14620		-1.8	-2.7	SCP2 domain-containing protein
EX31_RS08745		-1.8	-1.8	50S ribosomal protein L9
EX31_RS14325		-1.8	-8.9	envelope stress sensor histidine kinase CpxA
EX31_RS06055		-1.8	-3.4	phosphate ABC transporter ATP-binding protein PstB
EX31_RS05040		-1.7	-4.1	helix-turn-helix domain-containing protein
EX31_RS09580		-1.6	-1.4	flagellar motor switch protein FliN
EX31_RS03570		-1.6	-1.6	DUF721 domain-containing protein
EX31_RS12400		-1.6	-1.1	RNA polymerase factor sigma-54
EX31_RS04105		-1.6	-2.8	helix-turn-helix domain-containing protein
EX31_RS19480		-1.5	-5.3	acetate kinase
EX31_RS21850		-1.5	-2.0	pyridoxine 5'-phosphate synthase
EX31_RS17285		-1.5	-3.6	carboxy-S-adenosyl-L-methionine synthase CmoA
EX31_RS03955		-1.4	-5.2	two-component system response regulator ArcA
EX31_RS15155		-1.4	-2.5	diaminopimelate epimerase
EX31_RS10825		-1.4	-1.3	hypothetical protein
EX31_RS18525		-1.4	-3.1	DNA translocase FtsK
EX31_RS14340		-1.4	-1.3	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
EX31_RS06970		-1.4	-3.1	mannose-6-phosphate isomerase
EX31_RS13480		-1.3	-3.6	site-specific tyrosine recombinase XerD
EX31_RS26040		-1.3	-1.7	hypothetical protein
EX31_RS02515		-1.3	-1.5	PAS domain-containing protein
EX31_RS22750		-1.3	-2.5	phosphoribosylaminoimidazolesuccinocarboxamide synthase
EX31_RS19420		-1.3	-2.0	NADH-quinone oxidoreductase subunit NuoE
EX31_RS18095		-1.2	-3.7	quinone-dependent dihydroorotate dehydrogenase
EX31_RS11845		-1.2	-1.0	repressor LexA
EX31_RS13775		-1.2	-2.4	transcriptional regulator SlyA
EX31_RS15865		-1.2	-8.6	ribosome-dependent GTPase TypA
EX31_RS01970		-1.1	-1.4	hypothetical protein
EX31_RS09065		-1.1	-2.1	molecular chaperone
EX31_RS02525		-1.1	-5.5	ABC transporter permease
EX31_RS24555		-1.1	-5.5	two-component system sensor histidine kinase PhoQ
EX31_RS14435		-1.1	-3.8	glycosyltransferase family 4 protein
EX31_RS18040		-1.1	-7.7	porin OmpA
EX31_RS10490		-1.1	-1.5	putative selenium delivery protein YdfZ
EX31_RS25300		-1.1	-1.5	YqaE/Pmp3 family membrane protein
EX31_RS22785		-1.1	-1.9	YpfN family protein
EX31_RS04710		-1.1	-2.3	adenine-specific DNA-methyltransferase
EX31_RS19655		-1.1	-3.2	beta-ketoacyl-ACP synthase I
EX31_RS03835		-1.1	-4.8	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
EX31_RS16000		-1.0	-1.8	alternative ribosome-rescue factor A
EX31_RS04725		-1.0	-2.6	shikimate kinase AroK
EX31_RS08825		-1.0	-6.5	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
EX31_RS25100		-1.0	-1.6	PAAR domain-containing protein
EX31_RS22275		-1.0	-3.1	YbgC/FadM family acyl-CoA thioesterase
EX31_RS04925		-1.0	-2.1	Fe-S biogenesis protein NfuA
EX31_RS21895		-1.0	-7.1	phosphoribosylformylglycinamidine synthase
EX31_RS19780		-1.0	-3.2	tRNA-Arg
EX31_RS20265		-1.0	-2.1	YaiI/YqxD family protein
EX31_RS19310		-1.0	-5.7	ribonucleotide-diphosphate reductase subunit beta
EX31_RS02520		-1.0	-1.7	sigma-54-dependent Fis family transcriptional regulator
EX31_RS10020		-1.0	-1.5	YciI family protein
EX31_RS24325		-1.0	-2.3	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee
EX31_RS19375		-1.0	-2.3	NADH-quinone oxidoreductase subunit NuoN
EX31_RS02530		-1.0	-1.4	ABC transporter ATP-binding protein
EX31_RS19485		-1.0	-3.8	phosphate acetyltransferase
EX31_RS16845		-1.0	-2.2	DNA-binding protein HU-alpha
EX31_RS23460		-1.0	-4.0	cytochrome ubiquinol oxidase subunit I
EX31_RS12785		-0.9	-4.5	aspartate carbamoyltransferase
EX31_RS10515		-0.9	-2.2	disulfide bond formation protein DsbB
EX31_RS09940		-0.9	-4.1	23S rRNA pseudouridine(2605) synthase RluB
EX31_RS14500		-0.9	-3.9	orotate phosphoribosyltransferase
EX31_RS19570		-0.9	-5.6	amidophosphoribosyltransferase
EX31_RS14220		-0.9	-1.5	met regulon transcriptional regulator MetJ
EX31_RS04035		-0.9	-5.4	phosphoserine phosphatase
EX31_RS06955		-0.9	-1.3	hypothetical protein
EX31_RS21190		-0.9	-2.1	ribonuclease HI
EX31_RS03830		-0.9	-6.1	carbamoyl-phosphate synthase large subunit
EX31_RS05830		-0.9	-6.7	PTS mannitol transporter subunit IICBA
EX31_RS02625		-0.9	-2.1	hypothetical protein
EX31_RS06235		-0.9	-1.2	hypothetical protein
EX31_RS18540		-0.9	-0.6	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
EX31_RS19600		-0.9	-3.2	tRNA pseudouridine(38-40) synthase TruA
EX31_RS10180		-0.9	-1.3	type II 3-dehydroquinate dehydratase
EX31_RS14445		-0.9	-3.5	glycosyltransferase family 2 protein
EX31_RS20610		-0.9	-2.6	nitrogen regulatory protein P-II
EX31_RS25595		-0.9	-1.4	hypothetical protein
EX31_RS19305		-0.9	-6.7	ribonucleoside-diphosphate reductase subunit alpha
EX31_RS19410		-0.8	-3.3	NADH-quinone oxidoreductase subunit NuoG
EX31_RS14310		-0.8	-2.1	6-phosphofructokinase
EX31_RS26000		-0.8	-1.6	GntR family transcriptional regulator
EX31_RS22800		-0.8	-1.9	ArsC family reductase
EX31_RS19205		-0.8	-1.7	50S ribosomal protein L25
EX31_RS09490		-0.8	-0.8	hypothetical protein
EX31_RS23895		-0.8	-2.5	TetR/AcrR family transcriptional regulator
EX31_RS22620		-0.8	-2.6	5-(carboxyamino)imidazole ribonucleotide synthase
EX31_RS19435		-0.8	-1.5	NADH-quinone oxidoreductase subunit A
EX31_RS09170		-0.8	-2.2	ABC transporter ATP-binding protein
EX31_RS23465		-0.8	-3.2	cytochrome d ubiquinol oxidase subunit II
EX31_RS06550		-0.8	-1.9	two-component system response regulator NarL
EX31_RS03775		-0.8	-1.6	4-hydroxythreonine-4-phosphate dehydrogenase PdxA
EX31_RS04325		-0.8	-0.7	hypothetical protein
EX31_RS16860		-0.8	-6.0	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
EX31_RS25715		-0.8	-2.4	hypothetical protein
EX31_RS23470		-0.8	-0.9	cyd operon protein YbgE
EX31_RS01595		-0.8	-0.9	phage minor tail protein G
EX31_RS11840		-0.8	-5.5	diacylglycerol kinase
EX31_RS15805		-0.8	-1.9	DNA-directed RNA polymerase subunit omega
EX31_RS16425		-0.8	-2.8	DUF421 domain-containing protein
EX31_RS07800		-0.8	-3.2	recombinase RecA
EX31_RS21470		-0.8	-4.2	phosphoglycerate dehydrogenase
EX31_RS24255		-0.8	-5.5	glucans biosynthesis glucosyltransferase MdoH
EX31_RS04775		-0.8	-3.1	Hsp33 family molecular chaperone HslO
EX31_RS16855		-0.8	-4.5	phosphoribosylamine--glycine ligase
EX31_RS19395		-0.7	-1.6	NADH-quinone oxidoreductase subunit J
EX31_RS24375		-0.7	-1.2	biofilm formation regulator BssS
EX31_RS05000		-0.7	-1.9	glycerol-3-phosphate dehydrogenase
EX31_RS19380		-0.7	-2.3	NADH-quinone oxidoreductase subunit M
EX31_RS12510		-0.7	-5.0	FAD-dependent oxidoreductase
EX31_RS10340		-0.7	-1.0	GNAT family N-acetyltransferase
EX31_RS01530		-0.7	-0.6	hypothetical protein
EX31_RS25290		-0.7	-1.4	hypothetical protein
EX31_RS25105		-0.7	-1.2	DUF2474 domain-containing protein
EX31_RS07165		-0.7	-2.7	2-hydroxyacid dehydrogenase
EX31_RS11690		-0.7	-1.5	dihydroneopterin triphosphate diphosphatase
EX31_RS05785		-0.7	-1.4	superoxide dismutase [Mn]
EX31_RS25070		-0.7	-1.5	DUF551 domain-containing protein
EX31_RS00985		-0.7	-1.6	type VI secretion protein
EX31_RS25970		-0.7	-1.8	glutathione transferase GstA
EX31_RS24250		-0.7	-3.7	glucan biosynthesis protein G
EX31_RS09360		-0.7	-1.4	ABC transporter permease
EX31_RS02270		-0.7	-2.0	transcriptional regulator ChbR
EX31_RS15595		-0.7	-1.6	MetQ/NlpA family lipoprotein
EX31_RS03770		-0.7	-4.4	peptidylprolyl isomerase SurA
EX31_RS02695		-0.7	-2.4	YggT family protein
EX31_RS05855		-0.7	-1.4	glycine--tRNA ligase subunit beta
EX31_RS07555		-0.7	-1.1	glucose 1-dehydrogenase
EX31_RS17460		-0.7	-1.4	putative selenoprotein
EX31_RS08545		-0.7	-2.6	transcription termination/antitermination protein NusA
EX31_RS00380		-0.7	-1.8	ABC transporter ATP-binding protein
EX31_RS00490		-0.7	-1.9	paraquat-inducible protein A
EX31_RS16420		-0.7	-2.8	DUF3290 domain-containing protein
EX31_RS20530		-0.7	-2.5	nucleoside-diphosphate kinase
EX31_RS23785		-0.7	-1.4	DUF262 domain-containing protein
EX31_RS25415		-0.7	-0.8	helix-turn-helix domain-containing protein
EX31_RS22695		-0.7	-2.8	phosphoribosylformylglycinamidine cyclo-ligase
EX31_RS02690		-0.7	-2.5	pyrroline-5-carboxylate reductase
EX31_RS15630		-0.6	-1.6	YgdI/YgdR family lipoprotein
EX31_RS01885		-0.6	-1.1	type IV secretion protein Rhs
EX31_RS18970		-0.6	-1.8	DksA/TraR family C4-type zinc finger protein
EX31_RS24625		-0.6	-1.2	DUF2766 domain-containing protein
EX31_RS14550		-0.6	-1.1	Trk system potassium transporter TrkH
EX31_RS14770		-0.6	-1.8	hypothetical protein
EX31_RS15095		-0.6	-1.2	O-antigen assembly polymerase
EX31_RS10100		-0.6	-0.9	two-component system response regulator RssB
EX31_RS07050		-0.6	-2.1	sugar ABC transporter permease
EX31_RS11290		-0.6	-1.9	flagellar basal-body rod protein FlgG
EX31_RS02505		-0.6	-2.4	hypothetical protein
EX31_RS17010		-0.6	-1.4	sugar ABC transporter permease
EX31_RS19390		-0.6	-1.5	NADH-quinone oxidoreductase subunit NuoK
EX31_RS21785		-0.6	-3.2	ATP-dependent RNA helicase SrmB
EX31_RS11910		-0.6	-2.3	aspartate/tyrosine/aromatic aminotransferase
EX31_RS19610		-0.6	-2.4	4-phosphoerythronate dehydrogenase PdxB
EX31_RS23245		-0.6	-5.1	asparagine synthase B
EX31_RS19430		-0.6	-2.0	NADH-quinone oxidoreductase subunit B
EX31_RS10045		-0.6	-2.1	ABC transporter ATP-binding protein
EX31_RS05145		-0.6	-2.7	inorganic phosphate transporter PitA
EX31_RS12520		-0.6	-4.1	aerobic respiration two-component sensor histidine kinase ArcB

Specific Phenotypes

None in this experiment

For Rahnella sp. WP5 in mgl experiments