Experiment set4IT094 for Klebsiella michiganensis M5al

Compare to:

D-Gluconic Acid sodium salt carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -7.6 -5.3 colicin V production protein compare
BWI76_RS18930 -7.0 -6.8 histidinol-phosphate transaminase compare
BWI76_RS02995 -7.0 -6.8 aspartate carbamoyltransferase compare
BWI76_RS04255 -6.7 -6.6 threonine synthase compare
BWI76_RS20895 -6.7 -4.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01655 -6.7 -7.9 homoserine O-succinyltransferase compare
BWI76_RS04675 -6.6 -6.4 3-isopropylmalate dehydrogenase compare
BWI76_RS11850 -6.4 -8.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00850 -6.4 -11.5 acetylglutamate kinase compare
BWI76_RS00805 -6.3 -6.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS21475 -6.3 -6.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04160 -6.1 -5.8 phosphoserine phosphatase compare
BWI76_RS18935 -6.1 -6.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04670 -6.0 -9.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18950 -5.9 -5.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04470 -5.9 -9.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS04250 -5.7 -6.8 homoserine kinase compare
BWI76_RS23920 -5.6 -4.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00990 -5.6 -6.7 ketol-acid reductoisomerase compare
BWI76_RS04685 -5.6 -10.0 putative leucine operon leader peptide compare
BWI76_RS09760 -5.4 -6.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05840 -5.4 -5.2 glutamate 5-kinase compare
BWI76_RS00855 -5.4 -8.2 argininosuccinate lyase compare
BWI76_RS07070 -5.3 -6.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18925 -5.3 -6.3 histidinol dehydrogenase compare
BWI76_RS01615 -5.3 -9.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04665 -5.2 -19.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04680 -5.2 -13.4 2-isopropylmalate synthase compare
BWI76_RS23220 -5.2 -8.6 amino-acid N-acetyltransferase compare
BWI76_RS21465 -5.1 -6.9 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04245 -5.1 -13.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11855 -5.0 -6.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS22755 -5.0 -8.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS24285 -4.9 -9.0 cystathionine beta-lyase compare
BWI76_RS00835 -4.9 -13.6 phosphoenolpyruvate carboxylase compare
BWI76_RS18940 -4.8 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11840 -4.8 -4.5 tryptophan synthase subunit alpha compare
BWI76_RS11860 -4.8 -10.1 anthranilate synthase component I compare
BWI76_RS21265 -4.7 -12.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS11965 -4.7 -3.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS27385 -4.7 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS26085 -4.7 -3.2 3-dehydroquinate synthase compare
BWI76_RS09755 -4.6 -6.4 phosphoserine transaminase compare
BWI76_RS18920 -4.6 -3.8 ATP phosphoribosyltransferase compare
BWI76_RS20965 -4.6 -6.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS08385 -4.6 -4.4 citrate (Si)-synthase compare
BWI76_RS05835 -4.6 -4.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS23360 -4.5 -5.3 diaminopimelate decarboxylase compare
BWI76_RS04465 -4.4 -6.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00785 -4.4 -7.8 cystathionine gamma-synthase compare
BWI76_RS01610 -4.4 -6.2 phosphoribosylamine--glycine ligase compare
BWI76_RS00980 -4.4 -11.6 PLP-dependent threonine dehydratase compare
BWI76_RS11845 -4.4 -2.7 tryptophan synthase subunit beta compare
BWI76_RS18955 -4.4 -6.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS22765 -4.3 -11.4 sulfite reductase subunit alpha compare
BWI76_RS07065 -4.3 -8.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS25115 -4.3 -8.4 argininosuccinate synthase compare
BWI76_RS00985 -4.2 -7.0 transcriptional regulator IlvY compare
BWI76_RS04240 -4.1 -2.0 thr operon leader peptide compare
BWI76_RS00845 -4.1 -9.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23365 -4.1 -7.8 LysR family transcriptional regulator compare
BWI76_RS03010 -4.0 -8.1 ornithine carbamoyltransferase compare
BWI76_RS04645 -4.0 -6.6 3-dehydroquinase compare
BWI76_RS00975 -4.0 -6.7 dihydroxy-acid dehydratase compare
BWI76_RS09910 -4.0 -16.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02735 -4.0 -5.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22760 -4.0 -6.8 sulfite reductase subunit beta compare
BWI76_RS20350 -3.9 -7.8 amidophosphoribosyltransferase compare
BWI76_RS22805 -3.8 -12.2 GTP diphosphokinase compare
BWI76_RS05015 -3.7 -4.1 transcriptional regulator compare
BWI76_RS26055 -3.6 -10.5 siroheme synthase compare
BWI76_RS27390 -3.6 -5.5 ribonuclease PH compare
BWI76_RS10990 -3.6 -4.2 dihydroorotase compare
BWI76_RS20435 -3.4 -2.1 chorismate synthase compare
BWI76_RS02410 -3.4 -3.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS17720 -3.4 -2.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25645 -3.3 -8.8 shikimate dehydrogenase compare
BWI76_RS01210 -3.3 -2.1 tyrosine recombinase XerC compare
BWI76_RS00965 -3.0 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS23240 -2.8 -3.8 exonuclease V subunit gamma compare
BWI76_RS00400 -2.7 -1.8 glutamine synthetase compare
BWI76_RS04305 -2.7 -1.7 molecular chaperone DnaJ compare
BWI76_RS21140 -2.6 -3.8 molecular chaperone HscA compare
BWI76_RS20640 -2.5 -6.0 cysteine synthase A compare
BWI76_RS09645 -2.5 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS25315 -2.4 -11.6 glutamate synthase large subunit compare
BWI76_RS26000 -2.4 -7.1 aspartate aminotransferase family protein compare
BWI76_RS07985 -2.4 -1.8 fluoride ion transporter CrcB compare
BWI76_RS00390 -2.3 -8.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS25320 -2.3 -7.2 glutamate synthase compare
BWI76_RS22690 -2.3 -3.3 adenylyl-sulfate kinase compare
BWI76_RS04270 -2.3 -5.8 transaldolase compare
BWI76_RS09660 -2.2 -2.5 DNA translocase FtsK compare
BWI76_RS26455 -2.2 -4.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09670 -2.2 -4.3 recombination factor protein RarA compare
BWI76_RS01385 -2.1 -3.7 potassium transporter compare
BWI76_RS26615 -2.1 -7.9 gluconate:H+ symporter (from data) conserved
BWI76_RS26460 -2.1 -5.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00345 -2.0 -3.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS00180 -2.0 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS06185 -2.0 -9.6 shikimate kinase II compare
BWI76_RS01185 -2.0 -3.1 adenylate cyclase compare
BWI76_RS00385 -1.9 -9.3 nitrogen assimilation regulatory protein compare
BWI76_RS01200 -1.9 -2.5 diaminopimelate epimerase compare
BWI76_RS21370 -1.9 -3.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS23230 -1.9 -3.4 exodeoxyribonuclease V subunit beta compare
BWI76_RS19690 -1.8 -3.5 LysR family transcriptional regulator compare
BWI76_RS00960 -1.7 -5.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS18870 -1.7 -1.9 protein NifZ compare
BWI76_RS21075 -1.6 -1.1 membrane protein compare
BWI76_RS19025 -1.6 -8.9 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS23480 -1.5 -9.3 EAL domain-containing protein compare
BWI76_RS17980 -1.5 -4.8 RNA chaperone ProQ compare
BWI76_RS05200 -1.5 -2.8 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS01275 -1.5 -4.9 LysR family transcriptional regulator compare
BWI76_RS23885 -1.5 -1.9 2-octaprenylphenol hydroxylase compare
BWI76_RS25960 -1.4 -3.5 NUDIX hydrolase compare
BWI76_RS25335 -1.4 -3.7 stringent starvation protein A compare
BWI76_RS01350 -1.4 -1.6 NAD(P)H-flavin reductase compare
BWI76_RS08205 -1.4 -3.9 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS18165 -1.4 -1.4 NUDIX pyrophosphatase compare
BWI76_RS20440 -1.4 -1.6 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23030 -1.4 -1.5 cobalamin biosynthesis protein CbiM compare
BWI76_RS19935 -1.3 -1.9 hypothetical protein compare
BWI76_RS18100 -1.3 -7.0 phosphogluconate dehydratase conserved
BWI76_RS08580 -1.3 -4.2 quinolinate synthetase compare
BWI76_RS20695 -1.3 -1.5 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS15825 -1.3 -2.1 hypothetical protein compare
BWI76_RS26570 -1.3 -2.6 anion permease compare
BWI76_RS27430 -1.2 -1.1 (p)ppGpp synthetase compare
BWI76_RS06475 -1.2 -1.5 protoheme IX farnesyltransferase compare
BWI76_RS16275 -1.2 -2.3 fumarate hydratase FumA compare
BWI76_RS23265 -1.2 -3.2 hypothetical protein compare
BWI76_RS17975 -1.2 -3.2 tail-specific protease compare
BWI76_RS27165 -1.2 -4.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS15835 -1.2 -0.9 hypothetical protein compare
BWI76_RS27440 -1.2 -2.7 DNA helicase RecG compare
BWI76_RS23125 -1.2 -2.3 propanediol dehydratase small subunit compare
BWI76_RS20995 -1.2 -4.2 RNA degradosome polyphosphate kinase compare
BWI76_RS02985 -1.2 -4.4 reactive intermediate/imine deaminase compare
BWI76_RS14415 -1.1 -1.8 transcriptional regulator, TetR family protein compare
BWI76_RS05260 -1.1 -1.6 chaperone compare
BWI76_RS27435 -1.1 -3.8 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS17290 -1.1 -3.9 formyltetrahydrofolate deformylase compare
BWI76_RS02680 -1.1 -2.5 EamA family transporter compare
BWI76_RS25060 -1.0 -2.1 lipoprotein NlpI compare
BWI76_RS24485 -1.0 -1.6 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS02990 -1.0 -2.3 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS17155 -1.0 -2.1 hypothetical protein compare
BWI76_RS06680 -1.0 -0.9 hypothetical protein compare
BWI76_RS02445 -1.0 -2.2 fumarate reductase subunit C compare
BWI76_RS08525 -1.0 -2.6 colicin transporter compare
BWI76_RS21480 -1.0 -2.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS19585 -1.0 -1.5 gentisate 1,2-dioxygenase compare
BWI76_RS22695 -0.9 -2.8 sulfate adenylyltransferase compare
BWI76_RS23320 -0.9 -1.3 hypothetical protein compare
BWI76_RS23970 -0.9 -1.9 mechanosensitive ion channel protein MscS compare
BWI76_RS09615 -0.9 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS20720 -0.9 -1.5 hypothetical protein compare
BWI76_RS20970 -0.9 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS26075 -0.9 -2.8 DNA adenine methylase compare
BWI76_RS15215 -0.9 -1.0 N-acetyltransferase compare
BWI76_RS27425 -0.9 -1.9 DNA-directed RNA polymerase subunit omega compare
BWI76_RS25070 -0.9 -1.2 hypothetical protein compare
BWI76_RS11235 -0.9 -0.9 hypothetical protein compare
BWI76_RS14835 -0.9 -1.4 hypothetical protein compare
BWI76_RS09190 -0.9 -2.3 hypothetical protein compare
BWI76_RS26440 -0.9 -1.3 hypothetical protein compare
BWI76_RS06015 -0.9 -1.7 hypothetical protein compare
BWI76_RS18855 -0.9 -2.5 cysteine desulfurase NifS compare
BWI76_RS04530 -0.9 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS03040 -0.8 -1.7 leucyl aminopeptidase compare
BWI76_RS26620 -0.8 -0.8 Fe-S biogenesis protein NfuA compare
BWI76_RS04510 -0.8 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS25355 -0.8 -4.5 cell division protein ZapE compare
BWI76_RS14840 -0.8 -1.6 hypothetical protein compare
BWI76_RS11980 -0.8 -1.2 DeoR family transcriptional regulator compare
BWI76_RS08405 -0.8 -1.1 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS03660 -0.8 -2.8 hypothetical protein compare
BWI76_RS15830 -0.8 -2.1 hypothetical protein compare
BWI76_RS27605 -0.8 -2.2 hypothetical protein compare
BWI76_RS10700 -0.8 -2.5 XRE family transcriptional regulator compare
BWI76_RS00970 -0.8 -1.6 branched chain amino acid aminotransferase compare
BWI76_RS24600 -0.8 -3.2 dihydroxyacetone kinase compare
BWI76_RS10890 -0.8 -1.4 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS08210 -0.8 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26045 -0.8 -1.7 nitrite reductase small subunit compare
BWI76_RS20650 -0.8 -1.2 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS17310 -0.8 -2.1 AsnC family transcriptional regulator compare
BWI76_RS20750 -0.8 -1.0 carboxysome structural protein EutK compare
BWI76_RS25975 -0.8 -3.4 phosphoribulokinase compare
BWI76_RS13955 -0.8 -1.7 hypothetical protein compare
BWI76_RS22705 -0.8 -3.9 siroheme synthase compare
BWI76_RS09655 -0.8 -2.4 leucine-responsive regulatory protein compare
BWI76_RS11060 -0.8 -1.0 septum formation inhibitor Maf compare
BWI76_RS01070 -0.8 -3.3 thiol reductase thioredoxin compare
BWI76_RS00240 -0.8 -1.9 FMN-binding protein MioC compare
BWI76_RS06525 -0.8 -3.5 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS27815 -0.8 -5.3 acetolactate synthase catalytic subunit compare
BWI76_RS04515 -0.8 -1.2 Co2+/Mg2+ efflux protein ApaG compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source D-Gluconic Acid sodium salt in Klebsiella michiganensis M5al

For carbon source D-Gluconic Acid sodium salt across organisms