Experiment set4IT093 for Klebsiella michiganensis M5al

Compare to:

L-Fucose carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS21475 -6.5 -6.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS02815 -6.3 -4.3 fructose-bisphosphatase class I compare
BWI76_RS07065 -6.3 -9.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20355 -6.2 -4.6 colicin V production protein compare
BWI76_RS00855 -6.1 -7.2 argininosuccinate lyase compare
BWI76_RS18950 -6.0 -5.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18935 -6.0 -9.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS02995 -6.0 -8.2 aspartate carbamoyltransferase compare
BWI76_RS04255 -5.9 -9.9 threonine synthase compare
BWI76_RS11850 -5.9 -10.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS05015 -5.7 -3.9 transcriptional regulator compare
BWI76_RS04685 -5.7 -11.5 putative leucine operon leader peptide compare
BWI76_RS04250 -5.7 -8.6 homoserine kinase compare
BWI76_RS04160 -5.6 -7.1 phosphoserine phosphatase compare
BWI76_RS01615 -5.5 -10.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18940 -5.4 -7.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00850 -5.4 -11.9 acetylglutamate kinase compare
BWI76_RS18925 -5.4 -6.4 histidinol dehydrogenase compare
BWI76_RS00990 -5.4 -8.3 ketol-acid reductoisomerase compare
BWI76_RS00975 -5.2 -8.9 dihydroxy-acid dehydratase compare
BWI76_RS04470 -5.1 -11.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS04245 -5.1 -15.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS01210 -5.1 -4.0 tyrosine recombinase XerC compare
BWI76_RS21265 -5.1 -14.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09755 -5.1 -8.5 phosphoserine transaminase compare
BWI76_RS04665 -5.1 -20.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS24285 -5.1 -9.1 cystathionine beta-lyase compare
BWI76_RS19070 -5.1 -13.5 rhamnosyltransferase compare
BWI76_RS05840 -5.0 -5.9 glutamate 5-kinase compare
BWI76_RS18920 -5.0 -4.8 ATP phosphoribosyltransferase compare
BWI76_RS23220 -4.9 -7.8 amino-acid N-acetyltransferase compare
BWI76_RS00980 -4.9 -11.3 PLP-dependent threonine dehydratase compare
BWI76_RS00785 -4.8 -7.3 cystathionine gamma-synthase compare
BWI76_RS00845 -4.8 -9.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11965 -4.8 -5.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26085 -4.8 -3.3 3-dehydroquinate synthase compare
BWI76_RS04670 -4.8 -11.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00835 -4.8 -14.2 phosphoenolpyruvate carboxylase compare
BWI76_RS04675 -4.8 -7.6 3-isopropylmalate dehydrogenase compare
BWI76_RS22915 -4.8 -16.7 L-fuculose phosphate aldolase (EC 4.1.2.17) (from data) conserved
BWI76_RS25115 -4.7 -5.8 argininosuccinate synthase compare
BWI76_RS05835 -4.7 -4.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS09645 -4.6 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS11860 -4.6 -11.0 anthranilate synthase component I compare
BWI76_RS00805 -4.6 -5.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04680 -4.6 -15.1 2-isopropylmalate synthase compare
BWI76_RS23360 -4.5 -3.9 diaminopimelate decarboxylase compare
BWI76_RS05200 -4.5 -3.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS27385 -4.5 -8.0 orotate phosphoribosyltransferase compare
BWI76_RS01655 -4.4 -10.7 homoserine O-succinyltransferase compare
BWI76_RS07070 -4.4 -7.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22755 -4.4 -8.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS03010 -4.4 -9.0 ornithine carbamoyltransferase compare
BWI76_RS04645 -4.4 -5.7 3-dehydroquinase compare
BWI76_RS08385 -4.3 -5.1 citrate (Si)-synthase compare
BWI76_RS18930 -4.3 -4.5 histidinol-phosphate transaminase compare
BWI76_RS23920 -4.3 -3.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS22765 -4.3 -13.5 sulfite reductase subunit alpha compare
BWI76_RS19050 -4.3 -12.0 NAD(P)-dependent oxidoreductase compare
BWI76_RS21465 -4.2 -6.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11845 -4.2 -3.3 tryptophan synthase subunit beta compare
BWI76_RS20965 -4.2 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11855 -4.2 -7.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS19060 -4.1 -19.1 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS10990 -4.1 -4.0 dihydroorotase compare
BWI76_RS20895 -4.1 -7.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS11840 -4.1 -6.2 tryptophan synthase subunit alpha compare
BWI76_RS00985 -4.1 -8.2 transcriptional regulator IlvY compare
BWI76_RS04465 -4.1 -4.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18955 -4.0 -5.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS22690 -4.0 -4.9 adenylyl-sulfate kinase compare
BWI76_RS09910 -3.9 -16.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS20350 -3.8 -6.4 amidophosphoribosyltransferase compare
BWI76_RS19055 -3.8 -9.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS09760 -3.8 -4.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01610 -3.6 -9.3 phosphoribosylamine--glycine ligase compare
BWI76_RS17720 -3.5 -2.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19040 -3.5 -6.7 hypothetical protein compare
BWI76_RS20435 -3.5 -2.1 chorismate synthase compare
BWI76_RS02410 -3.4 -3.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS25335 -3.4 -4.6 stringent starvation protein A compare
BWI76_RS23365 -3.3 -7.8 LysR family transcriptional regulator compare
BWI76_RS22760 -3.3 -7.6 sulfite reductase subunit beta compare
BWI76_RS26460 -3.3 -7.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS01185 -3.2 -2.2 adenylate cyclase compare
BWI76_RS09660 -3.2 -3.0 DNA translocase FtsK compare
BWI76_RS23240 -3.2 -3.7 exonuclease V subunit gamma compare
BWI76_RS19045 -3.1 -6.5 capsular polysaccharide biosynthesis protein compare
BWI76_RS26455 -3.0 -5.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27390 -3.0 -5.8 ribonuclease PH compare
BWI76_RS19035 -2.9 -8.0 dTDP-rhamnosyl transferase compare
BWI76_RS02735 -2.9 -5.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS02530 -2.9 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS00400 -2.8 -1.9 glutamine synthetase compare
BWI76_RS26470 -2.7 -6.5 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS04240 -2.7 -4.3 thr operon leader peptide compare
BWI76_RS23230 -2.7 -2.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS25600 -2.4 -1.5 tRNA-Thr compare
BWI76_RS19010 -2.4 -2.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS00965 -2.4 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS26055 -2.4 -10.0 siroheme synthase compare
BWI76_RS20380 -2.4 -1.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS16965 -2.2 -3.4 murein lipoprotein compare
BWI76_RS20995 -2.1 -3.8 RNA degradosome polyphosphate kinase compare
BWI76_RS22930 -2.1 -7.1 L-fuculokinase (EC 2.7.1.51) (from data) conserved
BWI76_RS22940 -2.0 -5.7 DNA-binding transcriptional activator FucR conserved
BWI76_RS00345 -1.9 -3.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS20640 -1.9 -4.7 cysteine synthase A compare
BWI76_RS23480 -1.9 -11.3 EAL domain-containing protein compare
BWI76_RS04270 -1.9 -5.7 transaldolase compare
BWI76_RS15810 -1.9 -5.7 hypothetical protein compare
BWI76_RS25315 -1.8 -10.9 glutamate synthase large subunit compare
BWI76_RS01350 -1.8 -1.9 NAD(P)H-flavin reductase compare
BWI76_RS01385 -1.8 -3.5 potassium transporter compare
BWI76_RS26190 -1.8 -6.2 glycerol-3-phosphate dehydrogenase compare
BWI76_RS19065 -1.7 -13.5 dTDP-glucose 4,6-dehydratase compare
BWI76_RS27440 -1.7 -4.0 DNA helicase RecG compare
BWI76_RS22925 -1.7 -4.5 L-fucose isomerase compare
BWI76_RS09655 -1.7 -3.0 leucine-responsive regulatory protein compare
BWI76_RS01800 -1.7 -3.5 glucose-6-phosphate isomerase compare
BWI76_RS00960 -1.7 -5.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS25645 -1.7 -6.3 shikimate dehydrogenase compare
BWI76_RS25320 -1.7 -7.0 glutamate synthase compare
BWI76_RS25065 -1.7 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS20440 -1.6 -2.8 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS15835 -1.6 -1.3 hypothetical protein compare
BWI76_RS19090 -1.6 -9.3 polysaccharide export protein Wza compare
BWI76_RS21140 -1.6 -3.1 molecular chaperone HscA compare
BWI76_RS23915 -1.6 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS22920 -1.6 -10.7 MFS transporter conserved
BWI76_RS19085 -1.6 -9.8 protein-tyrosine-phosphatase compare
BWI76_RS15825 -1.6 -2.6 hypothetical protein compare
BWI76_RS00390 -1.5 -4.0 two-component system sensor histidine kinase NtrB compare
BWI76_RS09615 -1.5 -2.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS09640 -1.5 -4.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS21565 -1.5 -1.8 outer membrane protein assembly factor BamE compare
BWI76_RS04705 -1.5 -5.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS08525 -1.5 -3.5 colicin transporter compare
BWI76_RS19080 -1.5 -12.1 tyrosine autokinase compare
BWI76_RS26570 -1.4 -3.4 anion permease compare
BWI76_RS20650 -1.4 -1.3 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS16205 -1.4 -6.0 NAD(P) transhydrogenase subunit alpha compare
BWI76_RS01200 -1.4 -2.1 diaminopimelate epimerase compare
BWI76_RS01190 -1.4 -3.0 iron donor protein CyaY compare
BWI76_RS22805 -1.4 -6.4 GTP diphosphokinase compare
BWI76_RS15760 -1.3 -1.9 hypothetical protein compare
BWI76_RS27430 -1.3 -1.2 (p)ppGpp synthetase compare
BWI76_RS12855 -1.3 -2.2 enamine deaminase RidA compare
BWI76_RS17290 -1.3 -3.5 formyltetrahydrofolate deformylase compare
BWI76_RS01070 -1.3 -5.4 thiol reductase thioredoxin compare
BWI76_RS08520 -1.3 -2.8 colicin transporter TolQ compare
BWI76_RS26075 -1.3 -3.1 DNA adenine methylase compare
BWI76_RS20970 -1.3 -1.7 phosphoribosylglycinamide formyltransferase compare
BWI76_RS17975 -1.3 -4.2 tail-specific protease compare
BWI76_RS26000 -1.3 -4.4 aspartate aminotransferase family protein compare
BWI76_RS24900 -1.3 -1.6 DeoR family transcriptional regulator compare
BWI76_RS01110 -1.3 -2.7 TDP-fucosamine acetyltransferase compare
BWI76_RS16275 -1.3 -2.0 fumarate hydratase FumA compare
BWI76_RS04530 -1.2 -2.2 peptidylprolyl isomerase SurA compare
BWI76_RS26620 -1.2 -1.2 Fe-S biogenesis protein NfuA compare
BWI76_RS00140 -1.2 -1.3 phosphate transport system regulator PhoU compare
BWI76_RS20490 -1.2 -3.4 hypothetical protein compare
BWI76_RS19690 -1.2 -2.3 LysR family transcriptional regulator compare
BWI76_RS08580 -1.2 -3.6 quinolinate synthetase compare
BWI76_RS25070 -1.2 -1.5 hypothetical protein compare
BWI76_RS13820 -1.2 -1.8 hypothetical protein compare
BWI76_RS27165 -1.1 -3.2 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS17195 -1.1 -2.3 hypothetical protein compare
BWI76_RS06185 -1.1 -5.9 shikimate kinase II compare
BWI76_RS07740 -1.1 -1.3 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS15840 -1.1 -2.5 prophage protein compare
BWI76_RS24885 -1.1 -1.7 PTS galactitol transporter subunit IIB compare
BWI76_RS17980 -1.0 -4.1 RNA chaperone ProQ compare
BWI76_RS02985 -1.0 -4.4 reactive intermediate/imine deaminase compare
BWI76_RS07465 -1.0 -2.6 TetR family transcriptional regulator compare
BWI76_RS11105 -1.0 -2.3 aminodeoxychorismate lyase compare
BWI76_RS14435 -1.0 -1.2 glutamine ABC transporter ATP-binding protein compare
BWI76_RS17155 -1.0 -2.0 hypothetical protein compare
BWI76_RS09650 -1.0 -4.2 hypothetical protein compare
BWI76_RS18575 -1.0 -2.4 transcriptional regulator compare
BWI76_RS00970 -1.0 -1.7 branched chain amino acid aminotransferase compare
BWI76_RS21480 -1.0 -3.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS14075 -1.0 -1.1 TetR family transcriptional regulator compare
BWI76_RS21345 -1.0 -2.5 sigma-E factor regulatory protein RseB compare
BWI76_RS12225 -1.0 -2.6 hypothetical protein compare
BWI76_RS11520 -1.0 -1.1 hypothetical protein compare
BWI76_RS19685 -1.0 -3.8 lysine transporter compare
BWI76_RS09635 -1.0 -1.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS05120 -1.0 -4.9 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS22935 -1.0 -1.7 L-fucose mutarotase compare
BWI76_RS11430 -1.0 -1.0 lipoprotein compare
BWI76_RS09670 -1.0 -1.5 recombination factor protein RarA compare
BWI76_RS08395 -0.9 -1.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS00385 -0.9 -5.2 nitrogen assimilation regulatory protein compare
BWI76_RS21350 -0.9 -2.5 anti-RNA polymerase sigma factor SigE compare
BWI76_RS23330 -0.9 -4.1 transcriptional regulator GalR compare
BWI76_RS00180 -0.9 -1.0 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16425 -0.9 -2.6 hypothetical protein compare
BWI76_RS07820 -0.9 -2.0 S-methyl-5-thioribose kinase compare
BWI76_RS27510 -0.9 -3.0 aquaporin compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source L-Fucose in Klebsiella michiganensis M5al

For carbon source L-Fucose across organisms