Experiment set4IT092 for Klebsiella michiganensis M5al

Compare to:

D-Ribose carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.4 -5.8 histidinol-phosphate transaminase compare
BWI76_RS20355 -7.6 -5.2 colicin V production protein compare
BWI76_RS01655 -7.1 -8.5 homoserine O-succinyltransferase compare
BWI76_RS18950 -6.8 -4.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04255 -6.8 -6.7 threonine synthase compare
BWI76_RS04645 -6.7 -4.6 3-dehydroquinase compare
BWI76_RS07070 -6.7 -4.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04670 -6.6 -7.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18935 -6.5 -7.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01615 -6.4 -7.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04250 -6.4 -7.6 homoserine kinase compare
BWI76_RS02995 -6.3 -8.6 aspartate carbamoyltransferase compare
BWI76_RS04470 -6.3 -7.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS21465 -6.2 -6.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11965 -6.1 -5.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS23220 -5.9 -7.0 amino-acid N-acetyltransferase compare
BWI76_RS20350 -5.9 -7.7 amidophosphoribosyltransferase compare
BWI76_RS00855 -5.9 -8.1 argininosuccinate lyase compare
BWI76_RS00835 -5.9 -11.9 phosphoenolpyruvate carboxylase compare
BWI76_RS00850 -5.9 -9.6 acetylglutamate kinase compare
BWI76_RS21475 -5.9 -7.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04675 -5.8 -6.9 3-isopropylmalate dehydrogenase compare
BWI76_RS20895 -5.8 -5.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18925 -5.8 -7.9 histidinol dehydrogenase compare
BWI76_RS18940 -5.6 -6.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23360 -5.6 -3.9 diaminopimelate decarboxylase compare
BWI76_RS03010 -5.6 -11.2 ornithine carbamoyltransferase compare
BWI76_RS04685 -5.5 -11.2 putative leucine operon leader peptide compare
BWI76_RS04665 -5.4 -21.4 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09755 -5.3 -8.8 phosphoserine transaminase compare
BWI76_RS09760 -5.2 -5.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04160 -5.2 -6.2 phosphoserine phosphatase compare
BWI76_RS23920 -5.2 -7.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00980 -5.2 -10.5 PLP-dependent threonine dehydratase compare
BWI76_RS04245 -5.1 -14.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00845 -5.1 -9.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS08385 -5.1 -3.2 citrate (Si)-synthase compare
BWI76_RS00990 -5.1 -9.1 ketol-acid reductoisomerase compare
BWI76_RS18955 -5.1 -5.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00785 -5.0 -6.0 cystathionine gamma-synthase compare
BWI76_RS21265 -5.0 -12.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS24285 -5.0 -8.9 cystathionine beta-lyase compare
BWI76_RS04680 -4.8 -14.9 2-isopropylmalate synthase compare
BWI76_RS11850 -4.8 -7.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS26085 -4.8 -3.3 3-dehydroquinate synthase compare
BWI76_RS11840 -4.8 -4.5 tryptophan synthase subunit alpha compare
BWI76_RS04465 -4.7 -6.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS27385 -4.6 -8.8 orotate phosphoribosyltransferase compare
BWI76_RS18920 -4.6 -3.8 ATP phosphoribosyltransferase compare
BWI76_RS07065 -4.5 -5.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS09645 -4.5 -2.1 thioredoxin-disulfide reductase compare
BWI76_RS22765 -4.5 -16.7 sulfite reductase subunit alpha compare
BWI76_RS00965 -4.4 -2.1 acetolactate synthase 2 small subunit compare
BWI76_RS00805 -4.3 -5.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05840 -4.3 -6.5 glutamate 5-kinase compare
BWI76_RS04240 -4.2 -2.0 thr operon leader peptide compare
BWI76_RS09910 -4.2 -18.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11845 -4.1 -3.3 tryptophan synthase subunit beta compare
BWI76_RS20965 -4.0 -6.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11855 -4.0 -7.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00975 -4.0 -7.2 dihydroxy-acid dehydratase compare
BWI76_RS25115 -3.9 -4.8 argininosuccinate synthase compare
BWI76_RS01610 -3.9 -6.4 phosphoribosylamine--glycine ligase compare
BWI76_RS22755 -3.8 -10.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS22760 -3.7 -8.4 sulfite reductase subunit beta compare
BWI76_RS25960 -3.7 -5.5 NUDIX hydrolase compare
BWI76_RS00985 -3.6 -6.9 transcriptional regulator IlvY compare
BWI76_RS05835 -3.6 -3.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS10990 -3.6 -4.2 dihydroorotase compare
BWI76_RS11860 -3.5 -6.8 anthranilate synthase component I compare
BWI76_RS00290 -3.5 -9.6 Ribokinase (EC 2.7.1.15) (from data) conserved
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS20435 -3.4 -2.1 chorismate synthase compare
BWI76_RS00270 -3.3 -6.1 D-ribose pyranase (EC 5.4.99.62) (from data) conserved
BWI76_RS01185 -3.3 -2.2 adenylate cyclase compare
BWI76_RS27390 -3.1 -6.0 ribonuclease PH compare
BWI76_RS15825 -3.1 -2.4 hypothetical protein compare
BWI76_RS23365 -2.9 -4.2 LysR family transcriptional regulator compare
BWI76_RS05015 -2.9 -3.6 transcriptional regulator compare
BWI76_RS00280 -2.9 -6.7 ribose ABC transporter permease conserved
BWI76_RS00400 -2.8 -1.9 glutamine synthetase compare
BWI76_RS23240 -2.7 -4.0 exonuclease V subunit gamma compare
BWI76_RS06185 -2.7 -10.5 shikimate kinase II compare
BWI76_RS26455 -2.6 -3.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04270 -2.6 -5.4 transaldolase compare
BWI76_RS26055 -2.5 -9.9 siroheme synthase compare
BWI76_RS00275 -2.5 -9.6 ribose ABC transporter ATP-binding protein RbsA conserved
BWI76_RS00285 -2.4 -5.1 D-ribose ABC transporter substrate-binding protein conserved
BWI76_RS01210 -2.3 -2.8 tyrosine recombinase XerC compare
BWI76_RS05200 -2.3 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS26460 -2.3 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS15660 -2.2 -1.4 hypothetical protein compare
BWI76_RS26075 -2.2 -3.9 DNA adenine methylase compare
BWI76_RS22805 -2.2 -10.0 GTP diphosphokinase compare
BWI76_RS16275 -2.1 -3.4 fumarate hydratase FumA compare
BWI76_RS23480 -2.1 -10.9 EAL domain-containing protein compare
BWI76_RS02410 -2.1 -3.0 EF-P beta-lysylation protein EpmB compare
BWI76_RS02735 -2.1 -4.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20640 -2.0 -4.9 cysteine synthase A compare
BWI76_RS22690 -2.0 -2.9 adenylyl-sulfate kinase compare
BWI76_RS20440 -2.0 -1.9 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09615 -2.0 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16895 -2.0 -2.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS25645 -2.0 -5.9 shikimate dehydrogenase compare
BWI76_RS24900 -1.9 -2.1 DeoR family transcriptional regulator compare
BWI76_RS22240 -1.8 -8.5 transcriptional regulator compare
BWI76_RS27430 -1.8 -2.0 (p)ppGpp synthetase compare
BWI76_RS12185 -1.7 -3.4 hypothetical protein compare
BWI76_RS00345 -1.7 -2.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS23230 -1.6 -2.6 exodeoxyribonuclease V subunit beta compare
BWI76_RS03235 -1.6 -12.9 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS00390 -1.6 -4.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS03225 -1.5 -6.8 transcriptional regulator compare
BWI76_RS09335 -1.5 -1.6 baseplate assembly protein W compare
BWI76_RS25425 -1.4 -1.0 arginine repressor compare
BWI76_RS26570 -1.4 -2.6 anion permease compare
BWI76_RS19585 -1.4 -1.8 gentisate 1,2-dioxygenase compare
BWI76_RS24885 -1.4 -1.7 PTS galactitol transporter subunit IIB compare
BWI76_RS27075 -1.3 -6.4 IclR family transcriptional regulator compare
BWI76_RS15835 -1.3 -1.0 hypothetical protein compare
BWI76_RS02530 -1.3 -2.1 tRNA dimethylallyltransferase compare
BWI76_RS25320 -1.3 -5.6 glutamate synthase compare
BWI76_RS23915 -1.3 -2.7 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS21685 -1.2 -1.6 hypothetical protein compare
BWI76_RS20970 -1.2 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS21165 -1.2 -1.9 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS01200 -1.2 -2.0 diaminopimelate epimerase compare
BWI76_RS21140 -1.2 -2.6 molecular chaperone HscA compare
BWI76_RS03415 -1.2 -3.7 LacI family transcriptional regulator compare
BWI76_RS03080 -1.2 -3.1 (Fe-S)-cluster assembly protein compare
BWI76_RS00180 -1.2 -1.3 F0F1 ATP synthase subunit epsilon compare
BWI76_RS12470 -1.2 -1.8 thiosulfate sulfurtransferase PspE compare
BWI76_RS08750 -1.1 -1.2 kinase inhibitor compare
BWI76_RS05680 -1.1 -3.5 LacI family transcriptional regulator compare
BWI76_RS07640 -1.1 -1.7 short chain dehydrogenase compare
BWI76_RS21565 -1.1 -1.5 outer membrane protein assembly factor BamE compare
BWI76_RS25315 -1.1 -6.3 glutamate synthase large subunit compare
BWI76_RS27225 -1.1 -2.1 rhodanese-like domain-containing protein compare
BWI76_RS22420 -1.1 -2.9 LacI family transcriptional regulator compare
BWI76_RS20930 -1.1 -2.1 arsenate reductase (glutaredoxin) compare
BWI76_RS07985 -1.1 -1.2 fluoride ion transporter CrcB compare
BWI76_RS09150 -1.1 -3.5 DNA-binding transcriptional repressor DeoR compare
BWI76_RS01800 -1.1 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS02610 -1.0 -3.3 transcriptional regulator compare
BWI76_RS11895 -1.0 -2.5 AraC family transcriptional regulator compare
BWI76_RS14450 -1.0 -4.0 hypothetical protein compare
BWI76_RS06475 -1.0 -1.6 protoheme IX farnesyltransferase compare
BWI76_RS15865 -1.0 -2.9 hypothetical protein compare
BWI76_RS21675 -1.0 -1.7 hypothetical protein compare
BWI76_RS04530 -1.0 -1.8 peptidylprolyl isomerase SurA compare
BWI76_RS16300 -1.0 -2.9 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS19840 -1.0 -1.0 hypothetical protein compare
BWI76_RS15840 -1.0 -2.4 prophage protein compare
BWI76_RS22205 -1.0 -2.7 cation ABC transporter ATP-binding protein compare
BWI76_RS25600 -1.0 -0.9 tRNA-Thr compare
BWI76_RS13240 -1.0 -1.4 hypothetical protein compare
BWI76_RS23120 -0.9 -1.9 propanediol dehydratase medium subunit compare
BWI76_RS26000 -0.9 -3.0 aspartate aminotransferase family protein compare
BWI76_RS14770 -0.9 -1.2 PTS IIA 2 domain protein compare
BWI76_RS09625 -0.9 -1.6 hypothetical protein compare
BWI76_RS20785 -0.9 -1.2 ethanolamine utilization protein EutJ compare
BWI76_RS09870 -0.9 -3.9 aromatic amino acid aminotransferase compare
BWI76_RS18905 -0.9 -3.0 putrescine/spermidine ABC transporter compare
BWI76_RS01350 -0.9 -1.3 NAD(P)H-flavin reductase compare
BWI76_RS14615 -0.9 -1.3 hypothetical protein compare
BWI76_RS21370 -0.9 -1.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS12070 -0.9 -1.1 hypothetical protein compare
BWI76_RS02990 -0.9 -2.9 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS07865 -0.9 -2.1 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS06730 -0.9 -1.0 lac repressor compare
BWI76_RS07185 -0.9 -1.8 hypothetical protein compare
BWI76_RS01070 -0.9 -3.4 thiol reductase thioredoxin compare
BWI76_RS00385 -0.9 -4.3 nitrogen assimilation regulatory protein compare
BWI76_RS21345 -0.9 -0.9 sigma-E factor regulatory protein RseB compare
BWI76_RS05120 -0.9 -4.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21480 -0.9 -2.2 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS15810 -0.9 -3.5 hypothetical protein compare
BWI76_RS09670 -0.9 -2.1 recombination factor protein RarA compare
BWI76_RS24770 -0.8 -2.4 hypothetical protein compare
BWI76_RS16485 -0.8 -1.3 ribonuclease T compare
BWI76_RS09970 -0.8 -1.6 porin OmpA compare
BWI76_RS24025 -0.8 -4.6 agmatinase compare
BWI76_RS13220 -0.8 -2.2 N-acetyltransferase compare
BWI76_RS19195 -0.8 -2.6 nickel ABC transporter permease compare
BWI76_RS15680 -0.8 -3.0 hypothetical protein compare
BWI76_RS17525 -0.8 -1.3 XshC-Cox1-family protein compare
BWI76_RS19685 -0.8 -3.3 lysine transporter compare
BWI76_RS20720 -0.8 -0.7 hypothetical protein compare
BWI76_RS25060 -0.8 -1.6 lipoprotein NlpI compare
BWI76_RS20995 -0.8 -3.3 RNA degradosome polyphosphate kinase compare
BWI76_RS18575 -0.8 -1.8 transcriptional regulator compare
BWI76_RS21000 -0.8 -2.9 exopolyphosphatase compare
BWI76_RS19700 -0.8 -1.1 deoxyribonuclease IV compare
BWI76_RS25070 -0.8 -1.2 hypothetical protein compare
BWI76_RS11430 -0.8 -0.9 lipoprotein compare
BWI76_RS23125 -0.8 -1.8 propanediol dehydratase small subunit compare
BWI76_RS25065 -0.8 -1.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS16355 -0.8 -2.1 electron transport complex subunit A compare
BWI76_RS15630 -0.8 -2.2 hypothetical protein compare
BWI76_RS23305 -0.8 -2.3 NADP(H)-dependent aldo-keto reductase compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source D-Ribose in Klebsiella michiganensis M5al

For carbon source D-Ribose across organisms