Experiment set4IT091 for Methanococcus maripaludis S2

Compare to:

Formate deepwell acetate and casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01370 +2.1 16.1 acetate--CoA ligase family protein compare
MMP_RS08660 +1.3 7.7 DHH family phosphoesterase compare
MMP_RS07725 +0.9 3.8 4Fe-4S dicluster domain-containing protein compare
MMP_RS08315 +0.8 1.8 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS07180 +0.8 5.7 DEAD/DEAH box helicase compare
MMP_RS07860 +0.8 0.9 hypothetical protein compare
MMP_RS08280 +0.8 3.7 proteasome assembly chaperone family protein compare
MMP_RS03215 +0.8 6.4 MBL fold metallo-hydrolase compare
MMP_RS05835 +0.8 1.1 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS06540 +0.7 2.2 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00975 +0.7 5.3 HD domain-containing protein compare
MMP_RS08775 +0.7 3.7 methanogenesis marker 9 domain-containing protein compare
MMP_RS08930 +0.7 1.1 hypothetical protein compare
MMP_RS08310 +0.6 2.2 TMEM165/GDT1 family protein compare
MMP_RS08350 +0.6 1.1 hypothetical protein compare
MMP_RS01570 +0.6 1.6 hypothetical protein compare
MMP_RS02290 +0.6 4.1 MBL fold metallo-hydrolase compare
MMP_RS03385 +0.6 1.0 cation diffusion facilitator family transporter compare
MMP_RS01420 +0.6 1.6 hypothetical protein compare
MMP_RS02470 +0.6 1.0 helix-turn-helix transcriptional regulator compare
MMP_RS06545 +0.6 2.9 ferredoxin family protein compare
MMP_RS02410 +0.5 1.9 ABC transporter substrate-binding protein compare
MMP_RS08275 +0.5 3.8 hypothetical protein compare
MMP_RS01785 +0.5 3.2 hypothetical protein compare
MMP_RS00660 +0.5 4.2 alkaline phosphatase family protein compare
MMP_RS03150 +0.5 3.9 phosphoglycerate mutase compare
MMP_RS01775 +0.5 1.2 TIGR00297 family protein compare
MMP_RS00705 +0.5 1.0 hypothetical protein compare
MMP_RS03320 +0.5 1.9 metal-dependent transcriptional regulator compare
MMP_RS04480 +0.5 4.3 lysine 2 3-aminomutase compare
MMP_RS01650 +0.5 0.9 sulfurtransferase TusA family protein compare
MMP_RS06905 +0.5 1.4 hypothetical protein compare
MMP_RS07120 +0.5 4.1 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS06555 +0.5 1.8 cupin domain-containing protein compare
MMP_RS00080 +0.5 1.9 RecB-family nuclease compare
MMP_RS08670 +0.4 2.5 metallophosphoesterase compare
MMP_RS00185 +0.4 3.7 potassium channel protein compare
MMP_RS02605 +0.4 0.6 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08595 +0.4 0.7 flagellar protein C compare
MMP_RS07435 +0.4 1.4 GMP synthase subunit A compare
MMP_RS00655 +0.4 1.8 hypothetical protein compare
MMP_RS06765 +0.4 2.2 flap endonuclease-1 compare
MMP_RS06575 +0.4 2.5 fluoride efflux transporter CrcB compare
MMP_RS07415 +0.4 1.9 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS06490 +0.4 1.6 hypothetical protein compare
MMP_RS08160 +0.4 2.0 EamA family transporter compare
MMP_RS07680 +0.4 2.4 DUF366 family protein compare
MMP_RS02675 +0.4 1.6 hypothetical protein compare
MMP_RS05975 +0.4 1.0 hypothetical protein compare
MMP_RS07805 +0.4 2.3 ABC transporter permease compare
MMP_RS07560 +0.4 2.6 prefoldin subunit alpha compare
MMP_RS07855 +0.4 2.1 class I SAM-dependent methyltransferase compare
MMP_RS02405 +0.4 2.5 hypothetical protein compare
MMP_RS08500 +0.4 2.6 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01525 +0.4 1.0 nucleoside-diphosphate kinase compare
MMP_RS02045 +0.4 1.0 tRNA-Met compare
MMP_RS02295 +0.4 2.7 TatD family hydrolase compare
MMP_RS07840 +0.4 1.2 ribonuclease III compare
MMP_RS00675 +0.3 0.6 nitroreductase family protein compare
MMP_RS06550 +0.3 2.1 AMP-binding protein compare
MMP_RS06915 +0.3 1.5 metallophosphoesterase compare
MMP_RS05695 +0.3 2.4 phospholipase D-like domain-containing protein compare
MMP_RS08860 +0.3 2.0 MinD/ParA family protein compare
MMP_RS06500 +0.3 2.7 ATP-binding protein compare
MMP_RS00145 +0.3 2.1 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS05560 +0.3 1.9 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMP_RS01090 +0.3 2.6 ABC transporter substrate-binding protein compare
MMP_RS08980 +0.3 1.3 hypothetical protein compare
MMP_RS06860 +0.3 0.6 4Fe-4S binding protein compare
MMP_RS03235 +0.3 2.0 tRNA pseudouridine(13) synthase TruD compare
MMP_RS05985 +0.3 1.2 hypothetical protein compare
MMP_RS07620 +0.3 1.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08260 +0.3 2.0 DUF99 family protein compare
MMP_RS06225 +0.3 2.0 DNA double-strand break repair nuclease NurA compare
MMP_RS02315 +0.3 1.5 RimK family alpha-L-glutamate ligase compare
MMP_RS06335 +0.3 1.3 HAD family hydrolase compare
MMP_RS01580 +0.3 2.2 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS08075 +0.3 1.4 DUF749 domain-containing protein compare
MMP_RS05180 +0.3 2.3 Nre family DNA repair protein compare
MMP_RS04625 +0.3 2.3 DEAD/DEAH box helicase compare
MMP_RS07915 +0.3 2.0 DUF4870 domain-containing protein compare
MMP_RS07125 +0.3 1.1 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03800 +0.3 1.5 hypothetical protein compare
MMP_RS06875 +0.3 1.5 FAD-dependent oxidoreductase compare
MMP_RS06570 +0.3 1.5 DUF190 domain-containing protein compare
MMP_RS07085 +0.3 1.9 ribonuclease HII compare
MMP_RS07765 +0.3 2.3 sodium:alanine symporter family protein compare
MMP_RS01055 +0.3 1.6 hypothetical protein compare
MMP_RS01965 +0.3 1.5 DUF1616 domain-containing protein compare
MMP_RS05660 +0.3 2.0 phosphate ABC transporter substrate-binding protein compare
MMP_RS02085 +0.3 1.9 inosine/xanthosine triphosphatase compare
MMP_RS05435 +0.3 2.0 5'/3'-nucleotidase SurE compare
MMP_RS06920 +0.3 2.0 AAA family ATPase compare
MMP_RS05970 +0.3 1.2 class II SORL domain-containing protein compare
MMP_RS08085 +0.3 2.0 hypothetical protein compare
MMP_RS06910 +0.3 2.1 RlmF-related methyltransferase compare
MMP_RS07800 +0.3 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS08285 +0.3 1.4 serine/threonine protein kinase compare
MMP_RS01130 +0.3 1.5 flavoprotein compare
MMP_RS01435 +0.3 1.4 DMT family transporter compare
MMP_RS07815 +0.3 0.5 DUF2120 domain-containing protein compare
MMP_RS07910 +0.3 1.5 NAD(P)H-hydrate dehydratase compare
MMP_RS06675 +0.3 1.8 ADP-specific phosphofructokinase compare
MMP_RS07155 +0.3 1.6 MFS transporter compare
MMP_RS01485 +0.2 2.0 right-handed parallel beta-helix repeat-containing protein compare
MMP_RS08245 +0.2 1.7 DUF4013 domain-containing protein compare
MMP_RS06250 +0.2 1.6 hypothetical protein compare
MMP_RS04145 +0.2 0.6 hypothetical protein compare
MMP_RS00240 +0.2 2.0 type II secretion system F family protein compare
MMP_RS07130 +0.2 1.5 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS08535 +0.2 1.7 bis-aminopropyl spermidine synthase family protein compare
MMP_RS02770 +0.2 1.1 hypothetical protein compare
MMP_RS05170 +0.2 1.3 lysine exporter LysO family protein compare
MMP_RS07835 +0.2 1.1 TldD/PmbA family protein compare
MMP_RS07150 +0.2 1.4 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS07775 +0.2 1.3 alanine dehydrogenase compare
MMP_RS01275 +0.2 1.5 class III signal peptide-containing protein compare
MMP_RS07650 +0.2 1.7 TldD/PmbA family protein compare
MMP_RS06300 +0.2 1.7 ABC transporter substrate-binding protein compare
MMP_RS01430 +0.2 1.5 mechanosensitive ion channel family protein compare
MMP_RS07925 +0.2 1.1 haloacid dehalogenase compare
MMP_RS05945 +0.2 0.9 CBS domain-containing protein compare
MMP_RS08630 +0.2 1.1 archaellar assembly protein FlaJ compare
MMP_RS02230 +0.2 1.5 sodium-dependent transporter compare
MMP_RS02370 +0.2 1.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS01160 +0.2 1.7 DMT family transporter compare
MMP_RS01630 +0.2 1.3 N-glycosylase/DNA lyase compare
MMP_RS08475 +0.2 1.0 ABC transporter permease compare
MMP_RS08555 +0.2 0.7 hypothetical protein compare
MMP_RS07890 +0.2 0.8 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS04485 +0.2 1.8 putative beta-lysine N-acetyltransferase compare
MMP_RS09030 +0.2 1.2 hypothetical protein compare
MMP_RS03465 +0.2 0.4 adenine phosphoribosyltransferase compare
MMP_RS08455 +0.2 1.0 multiprotein bridging factor aMBF1 compare
MMP_RS03890 +0.2 0.9 DUF2540 domain-containing protein compare
MMP_RS08620 +0.2 1.3 flagellar accessory protein FlaH compare
MMP_RS06480 +0.2 1.3 ABC transporter substrate-binding protein compare
MMP_RS06965 +0.2 1.5 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS01620 +0.2 0.9 hypothetical protein compare
MMP_RS09065 +0.2 1.6 hypothetical protein compare
MMP_RS01285 +0.2 1.6 hypothetical protein compare
MMP_RS08615 +0.2 0.6 flagellar protein G compare
MMP_RS06275 +0.2 1.4 ATP-dependent DNA helicase compare
MMP_RS04635 +0.2 1.3 GNAT family N-acetyltransferase compare
MMP_RS07135 +0.2 1.4 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08665 +0.2 1.7 hypothetical protein compare
MMP_RS01120 +0.2 1.1 permease compare
MMP_RS08855 +0.2 1.6 hypothetical protein compare
MMP_RS09035 +0.2 0.8 hypothetical protein compare
MMP_RS01260 +0.2 0.8 HDIG domain-containing protein compare
MMP_RS00085 +0.2 1.2 DNA cytosine methyltransferase compare
MMP_RS08580 +0.2 0.8 flagellin compare
MMP_RS04030 +0.2 1.2 hypothetical protein compare
MMP_RS00760 +0.2 1.3 branched-chain-amino-acid transaminase compare
MMP_RS01655 +0.2 0.8 DsrE family protein compare
MMP_RS07100 +0.2 1.4 hypothetical protein compare
MMP_RS04945 +0.2 1.2 hypothetical protein compare
MMP_RS05455 +0.2 1.2 DUF167 domain-containing protein compare
MMP_RS02475 +0.2 0.7 hypothetical protein compare
MMP_RS05900 +0.2 1.4 tetratricopeptide repeat protein compare
MMP_RS06060 +0.2 1.0 hypothetical protein compare
MMP_RS06045 +0.2 1.4 DNA polymerase compare
MMP_RS08235 +0.2 1.0 hypothetical protein compare
MMP_RS02590 +0.2 1.3 low molecular weight phosphatase family protein compare
MMP_RS08700 +0.2 1.1 hypothetical protein compare
MMP_RS04150 +0.2 1.3 MFS transporter compare
MMP_RS01115 +0.2 1.2 molybdopterin molybdotransferase MoeA compare
MMP_RS05700 +0.2 1.2 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS07985 +0.2 1.4 nitroreductase family protein compare
MMP_RS06535 +0.2 1.0 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS02000 +0.2 1.2 radical SAM protein compare
MMP_RS07095 +0.2 0.5 PspC domain-containing protein compare
MMP_RS02845 +0.2 1.4 hypothetical protein compare
MMP_RS08405 +0.2 1.3 MFS transporter compare
MMP_RS08480 +0.2 1.4 molybdate ABC transporter substrate-binding protein compare
MMP_RS01460 +0.2 0.7 hypothetical protein compare
MMP_RS08325 +0.2 1.3 hypothetical protein compare
MMP_RS05530 +0.2 1.0 signal peptide peptidase SppA compare
MMP_RS06460 +0.2 0.9 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS02310 +0.2 0.4 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS02495 +0.2 0.7 hypothetical protein compare
MMP_RS00055 +0.2 1.3 DUF2254 domain-containing protein compare
MMP_RS05125 +0.2 1.2 D-aminoacyl-tRNA deacylase compare
MMP_RS06075 +0.2 1.0 class I SAM-dependent methyltransferase compare
MMP_RS03830 +0.2 0.9 exodeoxyribonuclease VII large subunit compare
MMP_RS08610 +0.2 1.2 flagellar protein F compare
MMP_RS00800 +0.2 1.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04985 +0.2 0.7 DUF2180 family protein compare
MMP_RS00825 +0.2 0.7 fumarylacetoacetate hydrolase family protein compare
MMP_RS06140 +0.2 0.4 radical SAM protein compare
MMP_RS06435 +0.2 0.7 CBS domain-containing protein compare
MMP_RS09045 +0.2 1.4 class III signal peptide-containing protein compare
MMP_RS08770 +0.2 0.9 hypothetical protein compare
MMP_RS04060 +0.2 0.8 hypothetical protein compare
MMP_RS00155 +0.2 1.0 heavy metal-binding domain-containing protein compare
MMP_RS08265 +0.2 0.9 rubrerythrin compare
MMP_RS02775 +0.2 1.3 hypothetical protein compare
MMP_RS07850 +0.2 0.7 prephenate dehydratase compare
MMP_RS08485 +0.2 1.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS00665 +0.1 0.7 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Mc_vitamins in Methanococcus maripaludis S2

For nutrient t2 Mc_vitamins across organisms