Experiment set4IT091 for Klebsiella michiganensis M5al

Compare to:

a-Cyclodextrin carbon source

200 most important genes:

  gene name fitness t score description  
BWI76_RS04465 -6.2 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04675 -5.4 -8.2 3-isopropylmalate dehydrogenase compare
BWI76_RS01210 -5.2 -4.3 tyrosine recombinase XerC compare
BWI76_RS08385 -5.2 -3.1 citrate (Si)-synthase compare
BWI76_RS27385 -5.0 -7.7 orotate phosphoribosyltransferase compare
BWI76_RS18955 -4.9 -6.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS26085 -4.9 -3.3 3-dehydroquinate synthase compare
BWI76_RS04670 -4.9 -10.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04255 -4.9 -10.8 threonine synthase compare
BWI76_RS04160 -4.8 -6.4 phosphoserine phosphatase compare
BWI76_RS04680 -4.7 -15.9 2-isopropylmalate synthase compare
BWI76_RS11860 -4.7 -10.4 anthranilate synthase component I compare
BWI76_RS03010 -4.7 -10.8 ornithine carbamoyltransferase compare
BWI76_RS07070 -4.7 -7.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS11855 -4.7 -6.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00990 -4.6 -7.5 ketol-acid reductoisomerase compare
BWI76_RS04685 -4.6 -12.9 putative leucine operon leader peptide compare
BWI76_RS11845 -4.6 -1.9 tryptophan synthase subunit beta compare
BWI76_RS02995 -4.6 -9.9 aspartate carbamoyltransferase compare
BWI76_RS20965 -4.5 -4.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS01615 -4.5 -12.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS03235 -4.5 -25.5 Neopullulanase (EC 3.2.1.135) (from data) compare
BWI76_RS00980 -4.5 -13.1 PLP-dependent threonine dehydratase compare
BWI76_RS00855 -4.4 -9.0 argininosuccinate lyase compare
BWI76_RS04470 -4.4 -9.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS23360 -4.4 -4.8 diaminopimelate decarboxylase compare
BWI76_RS04665 -4.3 -20.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS22755 -4.3 -10.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00975 -4.3 -9.1 dihydroxy-acid dehydratase compare
BWI76_RS24285 -4.2 -9.7 cystathionine beta-lyase compare
BWI76_RS11850 -4.2 -12.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS26570 -4.2 -4.9 anion permease compare
BWI76_RS04645 -4.2 -6.6 3-dehydroquinase compare
BWI76_RS18935 -4.2 -7.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09755 -4.1 -10.5 phosphoserine transaminase compare
BWI76_RS04250 -4.1 -7.7 homoserine kinase compare
BWI76_RS00845 -4.0 -11.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00805 -4.0 -7.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00835 -3.9 -14.9 phosphoenolpyruvate carboxylase compare
BWI76_RS00985 -3.9 -8.6 transcriptional regulator IlvY compare
BWI76_RS18930 -3.9 -3.9 histidinol-phosphate transaminase compare
BWI76_RS23365 -3.9 -6.1 LysR family transcriptional regulator compare
BWI76_RS18940 -3.9 -5.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS05840 -3.8 -7.2 glutamate 5-kinase compare
BWI76_RS01655 -3.8 -8.1 homoserine O-succinyltransferase compare
BWI76_RS21475 -3.8 -6.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04245 -3.8 -15.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18920 -3.7 -4.5 ATP phosphoribosyltransferase compare
BWI76_RS01800 -3.7 -5.0 glucose-6-phosphate isomerase compare
BWI76_RS26170 -3.7 -15.2 transcriptional regulator MalT compare
BWI76_RS20355 -3.7 -4.1 colicin V production protein compare
BWI76_RS23920 -3.7 -6.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21265 -3.6 -14.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS10990 -3.6 -4.2 dihydroorotase compare
BWI76_RS18950 -3.6 -6.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS22805 -3.5 -11.4 GTP diphosphokinase compare
BWI76_RS09910 -3.5 -17.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS02410 -3.5 -3.4 EF-P beta-lysylation protein EpmB compare
BWI76_RS23220 -3.5 -6.6 amino-acid N-acetyltransferase compare
BWI76_RS16480 -3.5 -5.8 lactoylglutathione lyase compare
BWI76_RS11840 -3.5 -4.6 tryptophan synthase subunit alpha compare
BWI76_RS26165 -3.5 -12.7 Glycogen phosphorylase (EC 2.4.1.1) (from data) compare
BWI76_RS09760 -3.5 -7.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05200 -3.5 -3.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22765 -3.5 -16.0 sulfite reductase subunit alpha compare
BWI76_RS20435 -3.4 -2.0 chorismate synthase compare
BWI76_RS09660 -3.4 -2.3 DNA translocase FtsK compare
BWI76_RS25115 -3.4 -7.1 argininosuccinate synthase compare
BWI76_RS05015 -3.4 -3.8 transcriptional regulator compare
BWI76_RS00850 -3.4 -8.7 acetylglutamate kinase compare
BWI76_RS18925 -3.4 -7.7 histidinol dehydrogenase compare
BWI76_RS11965 -3.3 -4.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09645 -3.3 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS22760 -3.3 -8.3 sulfite reductase subunit beta compare
BWI76_RS26160 -3.2 -13.7 4-alpha-glucanotransferase (EC 2.4.1.25) (from data) compare
BWI76_RS08525 -3.2 -5.4 colicin transporter compare
BWI76_RS23240 -3.2 -4.3 exonuclease V subunit gamma compare
BWI76_RS05570 -3.2 -1.9 hypothetical protein compare
BWI76_RS21465 -3.1 -4.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00785 -3.1 -7.1 cystathionine gamma-synthase compare
BWI76_RS01610 -3.1 -6.2 phosphoribosylamine--glycine ligase compare
BWI76_RS05835 -3.1 -4.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS01185 -3.1 -2.9 adenylate cyclase compare
BWI76_RS07065 -3.0 -11.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS02735 -3.0 -5.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS00400 -2.9 -2.0 glutamine synthetase compare
BWI76_RS00345 -2.9 -4.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS03250 -2.9 -22.6 maltose ABC transporter substrate-binding protein compare
BWI76_RS03240 -2.8 -11.0 maltodextrin ABC transporter permease compare
BWI76_RS20895 -2.8 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS20350 -2.8 -8.3 amidophosphoribosyltransferase compare
BWI76_RS06525 -2.8 -4.2 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS26455 -2.7 -5.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09670 -2.7 -3.7 recombination factor protein RarA compare
BWI76_RS00965 -2.7 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS03245 -2.6 -21.8 maltodextrin ABC transporter permease compare
BWI76_RS26055 -2.6 -11.1 siroheme synthase compare
BWI76_RS00390 -2.6 -8.7 two-component system sensor histidine kinase NtrB compare
BWI76_RS03270 -2.5 -18.5 sugar ABC transporter ATP-binding protein CymD compare
BWI76_RS27390 -2.5 -3.8 ribonuclease PH compare
BWI76_RS04240 -2.5 -4.3 thr operon leader peptide compare
BWI76_RS06530 -2.5 -8.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS17980 -2.5 -5.9 RNA chaperone ProQ compare
BWI76_RS20510 -2.5 -7.3 glucokinase compare
BWI76_RS23480 -2.4 -12.2 EAL domain-containing protein compare
BWI76_RS26075 -2.3 -5.1 DNA adenine methylase compare
BWI76_RS17720 -2.3 -1.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25645 -2.2 -9.0 shikimate dehydrogenase compare
BWI76_RS22690 -2.2 -4.4 adenylyl-sulfate kinase compare
BWI76_RS00385 -2.2 -11.7 nitrogen assimilation regulatory protein compare
BWI76_RS08535 -2.1 -2.8 translocation protein TolB compare
BWI76_RS03265 -2.1 -18.3 hypothetical protein compare
BWI76_RS20970 -2.1 -2.1 phosphoribosylglycinamide formyltransferase compare
BWI76_RS03080 -2.1 -5.5 (Fe-S)-cluster assembly protein compare
BWI76_RS03260 -2.1 -13.6 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS25065 -2.0 -3.1 polyribonucleotide nucleotidyltransferase compare
BWI76_RS26460 -2.0 -6.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20640 -2.0 -5.2 cysteine synthase A compare
BWI76_RS03255 -1.9 -12.4 hypothetical protein compare
BWI76_RS23230 -1.9 -2.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS06185 -1.9 -7.4 shikimate kinase II compare
BWI76_RS08520 -1.8 -1.9 colicin transporter TolQ compare
BWI76_RS08530 -1.8 -2.9 protein TolA compare
BWI76_RS16275 -1.7 -2.7 fumarate hydratase FumA compare
BWI76_RS25960 -1.7 -4.8 NUDIX hydrolase compare
BWI76_RS11520 -1.6 -1.4 hypothetical protein compare
BWI76_RS10055 -1.6 -2.8 AraC family transcriptional regulator compare
BWI76_RS21235 -1.6 -1.8 hypothetical protein compare
BWI76_RS25320 -1.6 -4.9 glutamate synthase compare
BWI76_RS01200 -1.6 -1.6 diaminopimelate epimerase compare
BWI76_RS02990 -1.6 -3.7 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS00180 -1.5 -1.9 F0F1 ATP synthase subunit epsilon compare
BWI76_RS02530 -1.5 -2.6 tRNA dimethylallyltransferase compare
BWI76_RS04490 -1.5 -9.6 glutathione-regulated potassium-efflux system ancillary protein KefF compare
BWI76_RS06015 -1.5 -2.3 hypothetical protein compare
BWI76_RS04530 -1.4 -2.5 peptidylprolyl isomerase SurA compare
BWI76_RS25060 -1.4 -3.9 lipoprotein NlpI compare
BWI76_RS16485 -1.4 -2.1 ribonuclease T compare
BWI76_RS04495 -1.4 -7.3 glutathione-regulated potassium-efflux system protein KefC compare
BWI76_RS08500 -1.4 -2.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS04515 -1.4 -1.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS04705 -1.4 -5.1 DNA-binding transcriptional regulator FruR compare
BWI76_RS20380 -1.3 -1.3 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS20440 -1.3 -1.6 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09150 -1.3 -4.2 DNA-binding transcriptional repressor DeoR compare
BWI76_RS25335 -1.3 -2.8 stringent starvation protein A compare
BWI76_RS20650 -1.3 -0.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS21140 -1.3 -2.9 molecular chaperone HscA compare
BWI76_RS19145 -1.3 -1.9 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS25315 -1.3 -7.4 glutamate synthase large subunit compare
BWI76_RS09450 -1.3 -1.9 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS18905 -1.3 -3.0 putrescine/spermidine ABC transporter compare
BWI76_RS06475 -1.3 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS26000 -1.3 -3.1 aspartate aminotransferase family protein compare
BWI76_RS17975 -1.3 -3.4 tail-specific protease compare
BWI76_RS23265 -1.3 -3.3 hypothetical protein compare
BWI76_RS12790 -1.2 -1.6 lactate dehydrogenase compare
BWI76_RS08580 -1.2 -3.9 quinolinate synthetase compare
BWI76_RS15825 -1.2 -2.1 hypothetical protein compare
BWI76_RS19870 -1.2 -2.8 malate:quinone oxidoreductase compare
BWI76_RS04305 -1.2 -1.1 molecular chaperone DnaJ compare
BWI76_RS20795 -1.1 -1.2 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS00960 -1.1 -3.8 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26390 -1.1 -3.6 cell division protein FtsX compare
BWI76_RS14415 -1.1 -2.1 transcriptional regulator, TetR family protein compare
BWI76_RS08405 -1.1 -2.1 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS00875 -1.1 -4.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS27430 -1.1 -1.4 (p)ppGpp synthetase compare
BWI76_RS01275 -1.1 -4.0 LysR family transcriptional regulator compare
BWI76_RS19480 -1.1 -2.8 transcriptional regulator compare
BWI76_RS27440 -1.1 -3.1 DNA helicase RecG compare
BWI76_RS10530 -1.1 -2.4 GntR family transcriptional regulator with compare
BWI76_RS03230 -1.1 -6.7 hypothetical protein compare
BWI76_RS16965 -1.1 -1.7 murein lipoprotein compare
BWI76_RS03665 -1.1 -1.4 ABC transporter ATP-binding protein compare
BWI76_RS14050 -1.1 -2.2 AP endonuclease, family 2 compare
BWI76_RS06535 -1.0 -4.1 endopeptidase La compare
BWI76_RS25505 -1.0 -4.6 RNase E specificity factor CsrD compare
BWI76_RS27815 -1.0 -6.7 acetolactate synthase catalytic subunit compare
BWI76_RS21480 -1.0 -3.0 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS21565 -1.0 -1.3 outer membrane protein assembly factor BamE compare
BWI76_RS15835 -1.0 -0.7 hypothetical protein compare
BWI76_RS11980 -1.0 -1.3 DeoR family transcriptional regulator compare
BWI76_RS00025 -1.0 -0.8 hypothetical protein compare
BWI76_RS23270 -1.0 -6.8 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS24900 -1.0 -1.3 DeoR family transcriptional regulator compare
BWI76_RS17815 -1.0 -5.3 ATP-dependent helicase compare
BWI76_RS27075 -1.0 -5.3 IclR family transcriptional regulator compare
BWI76_RS21165 -1.0 -1.5 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS19690 -1.0 -1.8 LysR family transcriptional regulator compare
BWI76_RS19700 -0.9 -1.4 deoxyribonuclease IV compare
BWI76_RS05450 -0.9 -1.5 ribonuclease HI compare
BWI76_RS00355 -0.9 -2.4 DNA polymerase I compare
BWI76_RS05180 -0.9 -4.5 serine endoprotease DegQ compare
BWI76_RS06250 -0.9 -3.7 alpha-glycosidase compare
BWI76_RS13280 -0.9 -3.1 LysR family transcriptional regulator compare
BWI76_RS27435 -0.9 -3.8 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH compare
BWI76_RS24385 -0.9 -4.7 phosphodiesterase compare
BWI76_RS26590 -0.9 -1.9 transcriptional regulator compare
BWI76_RS02090 -0.9 -2.2 membrane protein compare


Specific Phenotypes

For 53 genes in this experiment

For carbon source a-Cyclodextrin in Klebsiella michiganensis M5al

For carbon source a-Cyclodextrin across organisms