Experiment set4IT086 for Bifidobacterium breve UCC2003
Recovery broth with Nitrofurantoin 0.05 mM
Group: stressMedia: Recovery broth + Nitrofurantoin (0.05 mM), pH=6.8
Culturing: Bifido_ML2, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Anthony Shiver on 2/15/2020
Specific Phenotypes
For 6 genes in this experiment
For stress Nitrofurantoin in Bifidobacterium breve UCC2003
For stress Nitrofurantoin across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| DNA-replication | 1 |
| Pyridoxin (Vitamin B6) Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Purine metabolism
- Photosynthesis - antenna proteins
- Lipopolysaccharide biosynthesis
- Vitamin B6 metabolism
- Folate biosynthesis
- Porphyrin and chlorophyll metabolism
- Biosynthesis of type II polyketide backbone
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| pyridoxal 5'-phosphate biosynthesis II | 1 | 1 | 1 |