Experiment set4IT085 for Pseudomonas fluorescens FW300-N1B4

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Sodium octanoate carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Pf1N1B4_2496 -3.2 -13.3 Acyl-CoA dehydrogenase (EC 1.3.8.7) conserved
Pf1N1B4_3696 -3.0 -12.5 FIG00955360: hypothetical protein compare
Pf1N1B4_723 -2.7 -11.8 two-component system sensor protein compare
Pf1N1B4_3147 -2.6 -8.6 Putative NADPH-quinone reductase (modulator of drug activity B) compare
Pf1N1B4_4643 -2.4 -7.1 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form conserved
Pf1N1B4_3389 -2.3 -7.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) compare
Pf1N1B4_3113 -2.3 -11.6 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) compare
Pf1N1B4_3322 -2.3 -9.5 L-aspartate oxidase (EC 1.4.3.16) compare
Pf1N1B4_389 -2.1 -5.6 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) conserved
Pf1N1B4_3829 -1.9 -10.8 Magnesium and cobalt transport protein CorA compare
Pf1N1B4_5661 -1.9 -5.8 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) compare
Pf1N1B4_4750 -1.8 -5.7 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO conserved
Pf1N1B4_1142 -1.7 -7.9 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB compare
Pf1N1B4_3329 -1.7 -6.2 Putative permease PerM (= YfgO) conserved
Pf1N1B4_1296 -1.7 -9.5 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) compare
Pf1N1B4_293 -1.6 -5.6 hypothetical protein compare
Pf1N1B4_579 -1.5 -5.3 Membrane fusion component of tripartite multidrug resistance system conserved
Pf1N1B4_3824 -1.5 -8.4 FIG137360: hypothetical protein conserved
Pf1N1B4_573 -1.5 -7.6 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) compare
Pf1N1B4_3827 -1.4 -5.4 Esterase/lipase/thioesterase family protein conserved
Pf1N1B4_1418 -1.4 -8.2 Epoxyqueuosine (oQ) reductase QueG compare
Pf1N1B4_1445 -1.3 -7.2 lipoprotein, putative conserved
Pf1N1B4_2255 -1.3 -6.9 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) compare
Pf1N1B4_2111 -1.3 -7.8 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf1N1B4_1536 -1.2 -7.3 DamX, an inner membrane protein involved in bile resistance compare
Pf1N1B4_2617 -1.2 -5.3 Membrane protein with DUF350 domain compare
Pf1N1B4_3589 -1.1 -5.4 N-acetylneuraminate synthase (EC 2.5.1.56) compare
Pf1N1B4_2206 +1.4 6.3 FIG139438: lipoprotein B compare
Pf1N1B4_2681 +1.6 6.2 MaoC-like domain protein compare


Specific phenotypes for carbon source Sodium octanoate across organisms