Experiment set4IT079 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with HQNO 100uM

200 most detrimental genes:

  gene name fitness t score description  
DVU2867 +1.2 2.4 holin (TIGR) compare
DVU2669 +1.1 3.8 conserved domain protein (TIGR) compare
DVU0043 fliQ +1.1 6.8 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2894 flrA +1.0 6.6 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0034 +0.9 6.1 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0793 +0.9 6.5 hypothetical protein (TIGR) compare
DVU0311 +0.9 4.9 flagellar assembly protein FliH, putative (TIGR) compare
DVU2577 +0.9 3.7 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0312 fliG +0.9 7.0 flagellar motor switch protein FliG (TIGR) compare
DVU2045 +0.9 5.4 hypothetical protein (TIGR) compare
DVU0046 fliN +0.9 4.9 flagellar motor switch protein FliN (TIGR) compare
DVU3234 +0.8 4.9 flagellar biosynthetic protein FliR (TIGR) compare
DVU0910 fliM +0.8 5.4 flagellar motor switch protein FliM (TIGR) compare
DVU0314 fliE +0.8 4.2 flagellar basal body component FliE (TIGR) compare
DVU1265 +0.8 4.3 hypothetical protein (TIGR) compare
DVU2877 +0.8 5.0 hypothetical protein (TIGR) compare
DVU0044 fliP +0.8 4.7 flagellar biosynthetic protein fliP (TIGR) compare
DORF10446 +0.8 6.4 SEED: FIG00604570: hypothetical protein compare
DVU0398 +0.8 0.9 HMGL-like domain protein (TIGR) compare
DVU1251 +0.8 2.1 hypothetical protein (TIGR) compare
DVU2873 +0.8 1.1 hypothetical protein (TIGR) compare
DVU0310 fliI +0.8 6.5 flagellum-specific ATP synthase FliI (TIGR) compare
DVU2191 +0.7 3.4 hypothetical protein (TIGR) compare
DVU1491 +0.7 2.1 conserved hypothetical protein (TIGR) compare
DVU1271 +0.7 5.7 general secretion pathway protein F, putative (TIGR) compare
DVU2539 +0.7 1.0 hypothetical protein (TIGR) compare
DVU1263 pppA +0.7 5.2 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU0514 +0.7 5.7 FlgA family protein (TIGR) compare
DVU0516 flgI +0.7 4.5 flagellar P-ring protein FlgI (TIGR) compare
DVU0315 flgC +0.7 5.3 flagellar basal-body rod protein FlgC (TIGR) compare
DVU1682 +0.7 2.6 GAF domain protein (TIGR) compare
DVU1273 +0.7 5.3 bacterial type II/III secretion system protein (TIGR) compare
DVU2582 +0.7 3.7 transcriptional regulator, TetR family (TIGR) compare
DVU1363 rfbD +0.7 4.0 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU1268 +0.7 3.5 hypothetical protein (TIGR) compare
DVU3232 flhA +0.7 5.6 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0513 flgG +0.7 4.5 flagellar basal-body rod protein FlgG (TIGR) compare
DVU1630 ptsN +0.7 1.4 PTS system, IIA component (TIGR) compare
DVU0045 +0.7 3.4 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU2578 +0.6 4.4 response regulator (TIGR) compare
DVU0198 +0.6 3.9 minor capsid protein C, degenerate (TIGR) compare
DVU0512 flgF +0.6 3.9 flagellar basal-body rod protein, putative (TIGR) compare
DVU3233 flhB +0.6 4.8 flagellar biosynthetic protein FlhB (TIGR) compare
DVU1460 +0.6 1.6 hypothetical protein (TIGR) compare
DVU1274 +0.6 2.5 hypothetical protein (TIGR) compare
DVU1272 gspE +0.6 5.1 general secretion pathway protein E, putative (TIGR) compare
DVU0313 fliF +0.6 4.8 flagellar M-ring protein FliF (TIGR) compare
DVU1264 +0.6 3.4 transglycosylase SLT domain protein (TIGR) compare
DVU0202 +0.6 4.2 holin (TIGR) compare
DVU0698 rfbC +0.6 4.7 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU0519 +0.6 5.5 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU2881 +0.6 3.5 phage/plasmid primase, P4 family (TIGR) compare
DVU0420 +0.6 0.7 hypothetical protein (TIGR) compare
DVU1862 +0.6 3.5 GGDEF domain protein (TIGR) compare
DVU0518 +0.6 4.2 hypothetical protein (TIGR) compare
DVU2915 +0.6 3.8 hypothetical protein (TIGR) compare
DVU1403 cobO +0.6 3.5 cob(I)alamin adenosyltransferase (TIGR) compare
DVU2896 +0.6 5.1 TPR domain protein (TIGR) compare
DVU0912 +0.6 3.1 conserved domain protein (TIGR) compare
DVU2441 hspC +0.6 1.4 heat shock protein, Hsp20 family (TIGR) compare
DVU1063 flrC +0.6 3.5 transcriptional regulatory protein (TIGR) compare
DVU3229 fliA +0.6 2.8 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU2510 +0.6 0.5 penicillin-binding protein (TIGR) compare
DVU1863 +0.6 2.8 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU1266 +0.6 4.6 hypothetical protein (TIGR) compare
DVU1444 flgD +0.6 3.6 basal-body rod modification protein FlgD (TIGR) compare
DVU1600 +0.6 4.0 adenylate cyclase (TIGR) compare
DVU3364 +0.6 3.0 conserved hypothetical protein (TIGR) compare
DVU0515 flgH +0.6 4.3 flagellar L-ring protein FlgH (TIGR) compare
DVU2203 +0.6 1.4 endoribonuclease, L-PSP family (TIGR) compare
DVU0047 +0.5 2.5 flagellar protein FliL (TIGR) compare
DVU0307 +0.5 3.6 flagella basal body rod domain protein (TIGR) compare
DVU1007 cobU +0.5 2.7 cobinamide kinase/cobinamide phosphate guanylyltransferase (TIGR) compare
DVU2167 +0.5 2.2 hypothetical protein (TIGR) compare
DVU0063 +0.5 1.7 transcriptional regulator, MarR family (TIGR) compare
DVU0913 +0.5 2.6 conserved hypothetical protein (TIGR) compare
DVU0859 +0.5 3.5 hypothetical protein (TIGR) compare
DVU0863 +0.5 4.1 flagellar hook-associated protein 2, putative (TIGR) compare
DVU3283 +0.5 2.2 hypothetical protein (TIGR) compare
DORF10286 +0.5 2.6 no description compare
DVU2028 +0.5 2.9 conserved domain protein (TIGR) compare
DVU0024 +0.5 0.9 conserved hypothetical protein (TIGR) compare
DVU2819 +0.5 2.4 transcriptional regulator, TetR family (TIGR) compare
DVU1276 +0.5 3.6 hypothetical protein (TIGR) compare
DVU3197 ilvE +0.5 2.8 branched-chain amino acid aminotransferase (TIGR) compare
DVU0520 +0.5 3.8 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU1817 cyf +0.5 1.5 cytochrome c-553 (TIGR) compare
DVU1267 +0.5 2.2 hypothetical protein (TIGR) compare
DVU1420 +0.5 0.9 Hpt domain protein (TIGR) compare
DVU0193 +0.5 2.6 hypothetical protein (TIGR) compare
DVU3227 +0.5 3.0 flagellar basal body-associated protein, putative (TIGR) compare
DVU0410 +0.5 2.9 hypothetical protein (TIGR) compare
DVU0654 +0.5 3.2 peptidase, U32 family (TIGR) compare
DVU1441 flaB1 +0.5 2.6 flagellin (TIGR) compare
DVU0451 +0.4 4.0 chloride channel family protein (TIGR) compare
DVU1084 pstB-1 +0.4 3.1 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU1589 +0.4 2.2 hypothetical protein (TIGR) compare
DVU0316 flgB +0.4 1.4 flagellar basal-body rod protein FlgB (TIGR) compare
DORF20226 +0.4 1.9 no description compare
DVU0008 +0.4 0.3 hypothetical protein (TIGR) compare
DVU0657 +0.4 1.1 heat shock protein, Hsp20 family (TIGR) compare
DVU1275 +0.4 2.6 hypothetical protein (TIGR) compare
DVU0747 cysA +0.4 1.8 ABC transporter, ATP-binding protein (TIGR) compare
DORF26446 +0.4 0.7 no description compare
DVU1960 cheA-2 +0.4 3.3 chemotaxis protein CheA (TIGR) compare
DORF19331 +0.4 1.8 no description compare
DVU1384 pyrR +0.4 1.8 pyrimidine operon regulatory protein (TIGR) compare
DVU0293 +0.4 1.9 prokaryotic dksA/traR C4-type zinc finger family protein (TIGR) compare
DVU2871 +0.4 2.1 minor capsid protein C (TIGR) compare
DVU1464 +0.4 3.5 heptosyltransferase family protein (TIGR) compare
DVU0891 +0.4 2.2 aminotransferase, classes I and II (TIGR) compare
DVU1059 +0.4 2.4 aminotransferase, putative (TIGR) compare
DVU2809 +0.4 2.7 cytochrome c3 (TIGR) compare
DVU_tRNA-Arg-1 tRNA-Arg +0.4 1.1 tRNA with anticodon ACG for Arg (VIMSS-AUTO) compare
DVU1971 +0.4 2.3 conserved domain protein (TIGR) compare
DORF702 +0.4 0.7 no description compare
DVU2644 +0.4 1.4 transcriptional regulator, GntR family (TIGR) compare
DVU3325 +0.4 1.6 hypothetical protein (TIGR) compare
DVU0416 +0.4 2.6 GGDEF domain protein (TIGR) compare
DVU1875 +0.4 0.8 dafA protein (TIGR) compare
DVU2750 cbiD +0.4 2.9 cobalamin biosynthesis protein CbiD (TIGR) compare
DVU0898 +0.4 2.3 conserved hypothetical protein (TIGR) compare
DVU1443 flgE +0.4 2.6 flagellar hook protein FlgE (TIGR) compare
DVU1237 glnP +0.4 1.1 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DORF24435 +0.4 1.0 SEED: Sll1863 protein compare
DVU1257 +0.4 1.7 RNA-binding protein (TIGR) compare
DVU3223 aspB +0.4 3.2 aspartate aminotransferase (TIGR) compare
DVU2878 +0.4 1.6 adenine specific DNA methyltransferase, putative (TIGR) compare
DVU2092 moeB +0.4 1.8 thiF family protein (TIGR) compare
DVU0196 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0858 +0.4 2.5 lipoprotein, putative (TIGR) compare
DVU1465 +0.4 3.0 CgeB family protein (TIGR) compare
DVU2961 +0.4 2.8 hypothetical protein (TIGR) compare
DVU2712 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1521 +0.4 0.3 hypothetical protein (TIGR) compare
DVU3329 +0.4 1.0 hypothetical protein (TIGR) compare
DVU1595 cheR-1 +0.4 2.7 chemotaxis protein methyltransferase (TIGR) compare
DORF47110 +0.4 0.8 no description compare
DVU1221 +0.4 1.3 hypothetical protein (TIGR) compare
DVU2034 +0.4 1.7 hypothetical protein (TIGR) compare
DVU0702 +0.4 1.2 cytochrome c family protein (TIGR) compare
DORF12360 +0.4 1.6 SEED: FIG00605053: hypothetical protein compare
DVU1737 +0.4 1.6 conserved hypothetical protein (TIGR) compare
DVU2268 +0.4 1.0 hypothetical protein (TIGR) compare
DVU1962 +0.4 2.8 methyl-accepting chemotaxis protein (TIGR) compare
DVU2209 +0.4 1.8 conserved hypothetical protein (TIGR) compare
DVU1609 dapB +0.4 1.4 dihydrodipicolinate reductase (TIGR) compare
DVU1943 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0899 +0.4 0.6 conserved hypothetical protein (TIGR) compare
DVU3318 +0.4 1.5 hypothetical protein (TIGR) compare
DVU1632 +0.3 1.5 PTS system, IIA component (TIGR) compare
DVU0764 hup-2 +0.3 1.0 DNA-binding protein HU (TIGR) compare
DORF9585 +0.3 0.5 no description compare
DVU1192 acyP +0.3 1.7 acylphosphatase (TIGR) compare
DVU0646 cobI +0.3 1.6 precorrin-2 C20-methyltransferase (TIGR) compare
DVU3310 deaD +0.3 2.5 ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) compare
DVU1253 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0215 +0.3 1.7 tail protein, putative (TIGR) compare
DVU1908 pdxJ +0.3 0.5 pyridoxal phosphate biosynthetic protein PdxJ (TIGR) compare
DVU3076 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU2947 +0.3 1.2 anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) compare
DORF13021 +0.3 0.5 no description compare
DVU0197 +0.3 2.5 phage portal protein, lambda family (TIGR) compare
DVU1933 +0.3 0.4 peptidase, PfpI family (TIGR) compare
DVU1153 +0.3 1.4 hypothetical protein (TIGR) compare
DVU2677 +0.3 2.5 sensor histidine kinase/response regulator (TIGR) compare
DORF45537 +0.3 2.2 no description compare
DVU3225 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1620 +0.3 0.6 hypothetical protein (TIGR) compare
DVU1001 b0965 +0.3 2.3 coenzyme A binding protein (TIGR) compare
DVU2600 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1078 +0.3 2.2 R3H domain protein (TIGR) compare
DVU2323 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1760 +0.3 0.9 transcriptional regulator, TetR family (TIGR) compare
DVU2946 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2126 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2328 hypA +0.3 0.8 hydrogenase nickel insertion protein HypA, putative (TIGR) compare
DVU2966 +0.3 2.5 response regulator (TIGR) compare
DVU1082 +0.3 1.7 3- 5 exonuclease domain protein (TIGR) compare
DVU1946 oorB +0.3 2.2 pyruvate ferredoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU0693 narH +0.3 1.4 molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO) compare
DVU0393 ung +0.3 1.8 uracil-DNA glycosylase (TIGR) compare
DVU3260 +0.3 1.1 hypothetical protein (TIGR) compare
DVU1096 argF +0.3 1.8 ornithine carbamoyltransferase (TIGR) compare
DORF25031 +0.3 1.2 SEED: FIG00606465: hypothetical protein compare
DVU2470 b0786 +0.3 1.8 membrane protein, putaive (TIGR) compare
DVU0640 pomA +0.3 2.1 chemotaxis protein PomA (TIGR) compare
DVU3119 +0.3 1.6 AMP-binding enzyme family protein (TIGR) compare
DVU2238 +0.3 1.3 RNA methyltransferase, TrmH family (TIGR) compare
DVU3208 +0.3 1.2 membrane protein, putative (TIGR) compare
DVU2331 +0.3 1.3 Smr family protein (TIGR) compare
DVU1765 thiH +0.3 1.9 thiH protein, putative (TIGR) compare
DVU0210 +0.3 1.7 tail sheath protein, putative (TIGR) compare
DVU1045 +0.3 1.9 hypothetical protein (TIGR) compare
DVU0379 +0.3 1.2 transcriptional regulator, putative (TIGR) compare
DORF2077 +0.3 2.0 SEED: FIG00603320: hypothetical protein compare
DVU0542 +0.3 1.4 universal stress protein family (TIGR) compare
DVU0902 +0.3 2.1 TPR domain protein (TIGR) compare
DVU2169 +0.3 1.7 conserved hypothetical protein (TIGR) compare
DVU0308 +0.3 0.7 membrane protein, putative (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in stress experiments

For stress 2-n-Heptyl-4-hydroxyquinoline N-oxide across organisms