Experiment set4IT077 for Methanococcus maripaludis JJ

Compare to:

Iron limitation (0.2x), formate media

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00235 -7.1 -20.1 hypothetical protein compare
MMJJ_RS04485 -6.4 -8.8 riboflavin synthase compare
MMJJ_RS00580 -6.1 -2.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS06695 -5.4 -3.7 amidohydrolase compare
MMJJ_RS01600 -4.9 -3.3 radical SAM protein compare
MMJJ_RS04200 -4.7 -9.4 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03840 -4.7 -3.2 DHH family phosphoesterase compare
MMJJ_RS06490 -4.6 -3.2 methanogenesis marker 2 protein compare
MMJJ_RS04475 -4.6 -4.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS00275 -4.6 -3.6 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS03895 -4.6 -4.1 hydrogenase expression/formation protein HypE compare
MMJJ_RS02090 -4.4 -7.9 tyramine--L-glutamate ligase compare
MMJJ_RS05065 -4.4 -4.6 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS07410 -4.4 -6.0 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS03065 -4.4 -16.8 CBS domain-containing protein compare
MMJJ_RS03270 -4.3 -3.0 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS08795 -4.1 -3.8 phosphoglucosamine mutase compare
MMJJ_RS03785 -4.1 -2.8 hypothetical protein compare
MMJJ_RS05450 -4.1 -16.1 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS03620 -4.1 -8.2 DUF2097 domain-containing protein compare
MMJJ_RS06510 -4.1 -3.5 LL-diaminopimelate aminotransferase compare
MMJJ_RS00270 -4.0 -4.4 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS01935 -4.0 -5.2 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS03055 -4.0 -3.8 hypothetical protein compare
MMJJ_RS09375 -4.0 -2.4 hypothetical protein compare
MMJJ_RS04050 -3.9 -2.7 dihydroneopterin aldolase family protein compare
MMJJ_RS06255 -3.9 -7.9 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS02275 -3.9 -5.6 nucleotidyltransferase domain-containing protein compare
MMJJ_RS06390 -3.9 -2.7 NADPH-dependent F420 reductase compare
MMJJ_RS07950 -3.8 -4.5 4Fe-4S binding protein compare
MMJJ_RS05950 -3.8 -4.5 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS07000 -3.8 -2.5 TrkH family potassium uptake protein compare
MMJJ_RS00520 -3.8 -8.4 PDGLE domain-containing protein compare
MMJJ_RS05650 -3.7 -4.0 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05535 -3.7 -14.7 hypothetical protein compare
MMJJ_RS07665 -3.7 -24.9 formate dehydrogenase subunit alpha compare
MMJJ_RS03615 -3.7 -3.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS08625 -3.7 -8.2 magnesium/cobalt transporter CorA compare
MMJJ_RS05070 -3.7 -3.3 DNA primase catalytic subunit PriS compare
MMJJ_RS01750 -3.6 -3.3 ferrous iron transport protein A compare
MMJJ_RS05445 -3.6 -3.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS04800 -3.6 -8.7 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08250 -3.6 -7.8 hydrogenase maturation peptidase HycI compare
MMJJ_RS08320 -3.6 -2.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS07190 -3.6 -5.4 RtcB family protein compare
MMJJ_RS08065 -3.5 -2.6 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS06155 -3.5 -6.8 phosphatidylglycerophosphatase A compare
MMJJ_RS03005 -3.5 -5.1 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS08020 -3.5 -11.2 nucleotidyltransferase domain-containing protein compare
MMJJ_RS05610 -3.5 -5.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS00370 -3.5 -2.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06175 -3.5 -2.9 DUF1743 domain-containing protein compare
MMJJ_RS04155 -3.4 -9.3 hypothetical protein compare
MMJJ_RS03670 -3.4 -6.0 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS07785 -3.4 -3.7 fumarate reductase subunit A compare
MMJJ_RS07670 -3.4 -17.7 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS06730 -3.4 -9.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS06750 -3.4 -2.9 homoaconitase large subunit compare
MMJJ_RS02045 -3.3 -3.7 molybdenum cofactor guanylyltransferase compare
MMJJ_RS00355 -3.3 -3.9 ribonuclease P protein component 4 compare
MMJJ_RS06725 -3.3 -13.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS07655 -3.3 -17.2 hypothetical protein compare
MMJJ_RS06840 -3.3 -5.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03875 -3.3 -5.1 CBS domain-containing protein compare
MMJJ_RS03820 -3.2 -5.0 hydrogenase formation protein HypD compare
MMJJ_RS05330 -3.2 -3.6 DNA polymerase II large subunit compare
MMJJ_RS05490 -3.2 -4.0 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS07945 -3.2 -3.5 4Fe-4S binding protein compare
MMJJ_RS08055 -3.2 -8.7 methanogenesis marker 14 protein compare
MMJJ_RS01565 -3.2 -9.3 TIGR00267 family protein compare
MMJJ_RS01755 -3.2 -3.4 ferrous iron transport protein B compare
MMJJ_RS06915 -3.1 -13.9 helix-turn-helix domain-containing protein compare
MMJJ_RS06860 -3.1 -4.6 hypothetical protein compare
MMJJ_RS05260 -3.1 -6.4 ATP-grasp domain-containing protein compare
MMJJ_RS07970 -3.1 -3.0 O-phospho-L-seryl-tRNA:Cys-tRNA synthase compare
MMJJ_RS06875 -3.1 -3.2 hypothetical protein compare
MMJJ_RS08840 -3.0 -6.3 calcium/sodium antiporter compare
MMJJ_RS05935 -3.0 -3.3 Era-like GTP-binding protein compare
MMJJ_RS08330 -3.0 -4.6 SufD family Fe-S cluster assembly protein compare
MMJJ_RS04520 -3.0 -6.4 coenzyme F430 synthase compare
MMJJ_RS09175 -3.0 -1.9 anthranilate synthase component I compare
MMJJ_RS06040 -3.0 -4.8 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05995 -3.0 -3.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS03200 -3.0 -3.0 uroporphyrinogen-III synthase compare
MMJJ_RS07275 -2.9 -3.7 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03125 -2.9 -5.6 GMC oxidoreductase compare
MMJJ_RS03760 -2.9 -4.5 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS08005 -2.9 -16.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS02200 -2.9 -10.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS05360 -2.9 -8.0 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS04685 -2.9 -9.6 carbamoyltransferase HypF compare
MMJJ_RS04655 -2.9 -7.1 FAD-dependent oxidoreductase compare
MMJJ_RS08095 -2.9 -5.9 cobyric acid synthase CobQ compare
MMJJ_RS08660 -2.8 -4.1 acetylornithine transaminase compare
MMJJ_RS04730 -2.8 -3.4 tyrosine decarboxylase MfnA compare
MMJJ_RS06910 -2.8 -3.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06575 -2.8 -2.5 prephenate dehydrogenase compare
MMJJ_RS08080 -2.8 -10.1 TIGR00300 family protein compare
MMJJ_RS03225 -2.8 -3.4 4Fe-4S binding protein compare
MMJJ_RS05765 -2.8 -1.4 flagellar protein E compare
MMJJ_RS02920 -2.8 -2.6 30S ribosomal protein S27ae compare
MMJJ_RS07245 -2.8 -5.7 amidohydrolase family protein compare
MMJJ_RS03295 -2.8 -13.5 PHP domain-containing protein compare
MMJJ_RS08000 -2.7 -9.3 HesA/MoeB/ThiF family protein compare
MMJJ_RS01200 -2.7 -3.6 PRC-barrel domain-containing protein compare
MMJJ_RS05225 -2.7 -2.0 Gar1/Naf1 family protein compare
MMJJ_RS06240 -2.7 -3.2 dihydropteroate synthase-like protein compare
MMJJ_RS03150 -2.7 -7.1 2-phospho-L-lactate transferase compare
MMJJ_RS07380 -2.7 -7.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS03865 -2.6 -2.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS08335 -2.6 -2.6 ABC transporter ATP-binding protein compare
MMJJ_RS00210 -2.6 -2.9 DUF530 family protein compare
MMJJ_RS00530 -2.6 -13.3 cobalt ECF transporter T component CbiQ compare
MMJJ_RS06865 -2.6 -3.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS05620 -2.6 -6.0 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS07015 -2.6 -2.1 PFL family protein compare
MMJJ_RS05810 -2.6 -7.6 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS03830 -2.6 -8.9 CBS domain-containing protein compare
MMJJ_RS06785 -2.5 -7.3 RNA ligase partner protein compare
MMJJ_RS08155 -2.5 -4.8 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS05295 -2.5 -9.9 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS06835 -2.5 -12.5 4Fe-4S binding protein compare
MMJJ_RS07660 -2.5 -11.6 carbonic anhydrase compare
MMJJ_RS06625 -2.5 -2.2 pyruvate synthase subunit PorB compare
MMJJ_RS06855 -2.5 -1.5 DUF2104 domain-containing protein compare
MMJJ_RS00515 -2.5 -13.2 cobalt transporter CbiM compare
MMJJ_RS05575 -2.5 -4.7 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04675 -2.5 -5.9 thiamine pyrophosphate-binding protein compare
MMJJ_RS06805 -2.4 -3.6 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS06250 -2.4 -3.0 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05655 -2.4 -6.8 HisA/HisF family protein compare
MMJJ_RS06185 -2.4 -5.8 cobalamin biosynthesis protein compare
MMJJ_RS07350 -2.4 -3.3 4Fe-4S binding protein compare
MMJJ_RS05375 -2.4 -13.3 radical SAM protein compare
MMJJ_RS07720 -2.4 -2.8 UPF0058 family protein compare
MMJJ_RS04985 -2.4 -4.7 glutamyl-tRNA reductase compare
MMJJ_RS01865 -2.3 -6.7 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS04110 -2.3 -5.1 hypothetical protein compare
MMJJ_RS03660 -2.3 -3.3 DUF447 family protein compare
MMJJ_RS05155 -2.3 -5.5 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS02040 -2.3 -2.2 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS03190 -2.3 -3.2 phosphopyruvate hydratase compare
MMJJ_RS03580 -2.3 -3.0 TIGR00303 family protein compare
MMJJ_RS01690 -2.3 -3.6 methanogenesis marker 12 protein compare
MMJJ_RS04995 -2.3 -6.7 Tfx family DNA-binding protein compare
MMJJ_RS04615 -2.2 -3.8 methanogenesis marker 3 protein compare
MMJJ_RS06760 -2.2 -5.2 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS03800 -2.2 -10.8 aldolase compare
MMJJ_RS09190 -2.2 -2.1 tryptophan synthase subunit beta compare
MMJJ_RS03630 -2.2 -11.8 AMP phosphorylase compare
MMJJ_RS06180 -2.2 -3.3 tryptophan--tRNA ligase compare
MMJJ_RS01880 -2.2 -3.3 RlmE family RNA methyltransferase compare
MMJJ_RS05590 -2.2 -2.1 homoserine dehydrogenase compare
MMJJ_RS07345 -2.2 -6.6 homocysteine biosynthesis protein compare
MMJJ_RS07155 -2.2 -8.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01345 -2.1 -4.0 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS03110 -2.1 -4.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS00570 -2.1 -2.4 ribonuclease P compare
MMJJ_RS06225 -2.1 -2.7 adenosylmethionine decarboxylase compare
MMJJ_RS05930 -2.1 -1.8 cell division protein SepF compare
MMJJ_RS04010 -2.1 -6.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS07640 -2.1 -16.1 cache domain-containing protein compare
MMJJ_RS07995 -2.1 -7.2 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS00265 -2.1 -6.4 TIGR02253 family HAD-type hydrolase compare
MMJJ_RS05770 -2.1 -2.7 flagellar protein D compare
MMJJ_RS07635 -2.1 -9.3 response regulator transcription factor compare
MMJJ_RS01830 -2.1 -3.0 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08620 -2.1 -2.8 DUF373 family protein compare
MMJJ_RS06215 -2.1 -4.1 agmatinase compare
MMJJ_RS07980 -2.1 -9.2 biotin synthase BioB compare
MMJJ_RS06485 -2.1 -3.3 phosphoglycerate kinase compare
MMJJ_RS04790 -2.1 -3.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS00205 -2.0 -4.4 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS01410 -2.0 -5.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS06905 -2.0 -2.5 hypothetical protein compare
MMJJ_RS00645 -2.0 -9.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS00600 -2.0 -3.1 hydroxymethylbilane synthase compare
MMJJ_RS04595 -2.0 -5.1 hypothetical protein compare
MMJJ_RS08855 -2.0 -5.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS04650 -2.0 -5.4 nitrogenase iron protein compare
MMJJ_RS07370 -2.0 -3.5 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS00475 -2.0 -1.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05720 -1.9 -3.0 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS03635 -1.9 -2.6 methionine--tRNA ligase compare
MMJJ_RS07705 -1.9 -3.4 GTP-binding protein EngB compare
MMJJ_RS06270 -1.9 -7.0 dethiobiotin synthase compare
MMJJ_RS00360 -1.9 -2.1 adenosylhomocysteinase compare
MMJJ_RS05415 -1.9 -2.0 hypothetical protein compare
MMJJ_RS00125 -1.9 -2.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS05190 -1.9 -7.2 gamma carbonic anhydrase family protein compare
MMJJ_RS06705 -1.9 -4.0 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS02055 -1.9 -10.0 GTP 3',8-cyclase MoaA compare
MMJJ_RS00045 -1.9 -9.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00425 -1.8 -3.0 hypothetical protein compare
MMJJ_RS06380 -1.8 -3.0 signal recognition particle protein Srp54 compare
MMJJ_RS00215 -1.8 -2.4 CCA tRNA nucleotidyltransferase compare
MMJJ_RS00040 -1.8 -5.7 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS05380 -1.8 -1.6 hypothetical protein compare
MMJJ_RS00050 -1.8 -8.0 AAA family ATPase compare
MMJJ_RS00070 -1.8 -3.8 CooT family nickel-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms