Experiment set4IT076 for Methanococcus maripaludis JJ

Compare to:

Iron limitation (0.2x), formate media

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +1.9 2.4 hypothetical protein compare
MMJJ_RS09005 +1.3 10.6 N-6 DNA methylase compare
MMJJ_RS08830 +1.1 4.3 hypothetical protein compare
MMJJ_RS09000 +1.0 7.3 restriction endonuclease compare
MMJJ_RS06210 +0.9 5.3 hypothetical protein compare
MMJJ_RS04955 +0.7 4.2 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS05915 +0.7 2.2 multiprotein bridging factor aMBF1 compare
MMJJ_RS04965 +0.7 2.2 RNA polymerase Rpb4 family protein compare
MMJJ_RS07025 +0.6 2.5 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS04005 +0.6 4.6 acetate--CoA ligase family protein compare
MMJJ_RS09300 +0.6 1.3 hypothetical protein compare
MMJJ_RS07185 +0.6 1.9 DUF371 domain-containing protein compare
MMJJ_RS02270 +0.6 2.1 HEPN domain-containing protein compare
MMJJ_RS06680 +0.6 3.6 DUF366 family protein compare
MMJJ_RS06495 +0.6 2.8 hypothetical protein compare
MMJJ_RS05530 +0.6 2.1 roadblock/LC7 domain-containing protein compare
MMJJ_RS08130 +0.6 0.5 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS01785 +0.6 0.9 50S ribosomal protein L14e compare
MMJJ_RS07915 +0.5 2.9 CBS domain-containing protein compare
MMJJ_RS03725 +0.5 2.2 sulfurtransferase TusA family protein compare
MMJJ_RS05280 +0.5 0.6 hypothetical protein compare
MMJJ_RS05685 +0.5 3.2 class III signal peptide-containing protein compare
MMJJ_RS01395 +0.5 2.6 DUF1894 domain-containing protein compare
MMJJ_RS00150 +0.5 2.5 DUF2180 family protein compare
MMJJ_RS06385 +0.5 2.1 hypothetical protein compare
MMJJ_RS07920 +0.5 2.9 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS08935 +0.5 0.7 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS07795 +0.5 2.5 cupin domain-containing protein compare
MMJJ_RS07240 +0.5 3.6 MBL fold metallo-hydrolase compare
MMJJ_RS04105 +0.5 3.4 prepilin peptidase compare
MMJJ_RS07750 +0.5 1.5 class III signal peptide-containing protein compare
MMJJ_RS05975 +0.4 2.3 sulfurtransferase TusA family protein compare
MMJJ_RS06515 +0.4 3.1 ribonuclease III compare
MMJJ_RS06460 +0.4 2.1 cytochrome c compare
MMJJ_RS07260 +0.4 2.6 PspC domain-containing protein compare
MMJJ_RS06440 +0.4 2.6 DUF4870 domain-containing protein compare
MMJJ_RS03905 +0.4 2.2 ATP-binding cassette domain-containing protein compare
MMJJ_RS07235 +0.4 3.2 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS04850 +0.4 1.9 energy-coupling factor transporter transmembrane protein EcfT compare
MMJJ_RS03375 +0.4 2.0 hypothetical protein compare
MMJJ_RS06585 +0.4 2.3 alanine racemase compare
MMJJ_RS01855 +0.4 3.1 MBL fold metallo-hydrolase compare
MMJJ_RS06535 +0.4 2.7 UPF0104 family protein compare
MMJJ_RS08805 +0.4 2.0 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMJJ_RS04375 +0.4 1.8 hypothetical protein compare
MMJJ_RS06790 +0.4 3.2 nucleotidyltransferase family protein compare
MMJJ_RS07800 +0.4 3.2 AMP-binding protein compare
MMJJ_RS08100 +0.4 1.8 hypothetical protein compare
MMJJ_RS09360 +0.4 2.5 hypothetical protein compare
MMJJ_RS07270 +0.4 2.0 ribonuclease HII compare
MMJJ_RS07890 +0.4 2.4 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS01670 +0.4 1.6 hypothetical protein compare
MMJJ_RS06505 +0.4 1.7 prephenate dehydratase compare
MMJJ_RS00145 +0.4 2.7 aquaporin family protein compare
MMJJ_RS06745 +0.4 2.0 energy-coupling factor ABC transporter permease compare
MMJJ_RS06190 +0.4 2.5 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06950 +0.4 2.2 4-demethylwyosine synthase TYW1 compare
MMJJ_RS04500 +0.4 2.7 hypothetical protein compare
MMJJ_RS05525 +0.4 1.5 GTP-binding protein compare
MMJJ_RS08160 +0.4 2.1 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMJJ_RS05695 +0.4 1.5 class III signal peptide-containing protein compare
MMJJ_RS00525 +0.4 1.0 Dabb family protein compare
MMJJ_RS07230 +0.4 1.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS09065 +0.4 1.7 hypothetical protein compare
MMJJ_RS01010 +0.4 3.3 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS07220 +0.4 2.5 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS02285 +0.4 1.1 class III signal peptide-containing protein compare
MMJJ_RS07225 +0.4 2.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06090 +0.4 2.3 hypothetical protein compare
MMJJ_RS08485 +0.3 1.4 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS04635 +0.3 1.7 DUF367 family protein compare
MMJJ_RS07210 +0.3 2.2 AmmeMemoRadiSam system protein B compare
MMJJ_RS06085 +0.3 1.5 proteasome assembly chaperone family protein compare
MMJJ_RS09370 +0.3 1.1 heavy-metal-associated domain-containing protein compare
MMJJ_RS08015 +0.3 1.4 HAD family hydrolase compare
MMJJ_RS06960 +0.3 2.7 CAP domain-containing protein compare
MMJJ_RS07255 +0.3 2.6 hypothetical protein compare
MMJJ_RS01825 +0.3 1.3 DNA repair and recombination protein RadB compare
MMJJ_RS07445 +0.3 2.0 RlmF-related methyltransferase compare
MMJJ_RS02355 +0.3 1.9 DUF2798 domain-containing protein compare
MMJJ_RS06500 +0.3 2.3 class I SAM-dependent methyltransferase compare
MMJJ_RS04135 +0.3 1.2 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS07480 +0.3 2.3 FAD-dependent oxidoreductase compare
MMJJ_RS06685 +0.3 2.4 S-layer protein compare
MMJJ_RS06640 +0.3 1.9 YfcE family phosphodiesterase compare
MMJJ_RS03450 +0.3 1.5 hypothetical protein compare
MMJJ_RS06710 +0.3 2.1 TldD/PmbA family protein compare
MMJJ_RS07005 +0.3 0.6 transcription factor S compare
MMJJ_RS03040 +0.3 2.2 lactate utilization protein compare
MMJJ_RS06770 +0.3 2.2 hypothetical protein compare
MMJJ_RS04345 +0.3 1.4 DUF2080 family transposase-associated protein compare
MMJJ_RS07450 +0.3 1.7 hypothetical protein compare
MMJJ_RS06045 +0.3 2.0 hypothetical protein compare
MMJJ_RS04215 +0.3 2.1 DMT family transporter compare
MMJJ_RS06100 +0.3 2.0 rubrerythrin compare
MMJJ_RS06740 +0.3 1.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS08285 +0.3 2.2 class I SAM-dependent methyltransferase compare
MMJJ_RS07760 +0.3 1.7 GNAT family N-acetyltransferase compare
MMJJ_RS05390 +0.3 1.8 tRNA pseudouridine(13) synthase TruD compare
MMJJ_RS06280 +0.3 1.9 hypothetical protein compare
MMJJ_RS02115 +0.3 1.9 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07825 +0.3 1.2 YciI family protein compare
MMJJ_RS06580 +0.3 1.9 alanine dehydrogenase compare
MMJJ_RS04365 +0.3 1.8 helix-turn-helix transcriptional regulator compare
MMJJ_RS05960 +0.3 1.8 DUF169 domain-containing protein compare
MMJJ_RS07280 +0.3 1.5 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS04545 +0.3 0.8 PadR family transcriptional regulator compare
MMJJ_RS06205 +0.3 1.4 EamA family transporter compare
MMJJ_RS01795 +0.3 1.5 TIGR00266 family protein compare
MMJJ_RS07820 +0.3 1.9 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS07815 +0.3 1.6 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS06235 +0.2 1.9 IGHMBP2 family helicase compare
MMJJ_RS06925 +0.2 0.6 GMP synthase subunit A compare
MMJJ_RS07765 +0.2 0.9 DMT family protein compare
MMJJ_RS07805 +0.2 1.1 ferredoxin family protein compare
MMJJ_RS07740 +0.2 1.4 DUF2334 domain-containing protein compare
MMJJ_RS00875 +0.2 1.2 hydrogenase iron-sulfur subunit compare
MMJJ_RS05040 +0.2 1.6 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS03605 +0.2 1.2 TIGR00297 family protein compare
MMJJ_RS05690 +0.2 2.1 hypothetical protein compare
MMJJ_RS05500 +0.2 2.0 hypothetical protein compare
MMJJ_RS08525 +0.2 1.3 peptidylprolyl isomerase compare
MMJJ_RS03595 +0.2 1.4 hypothetical protein compare
MMJJ_RS06765 +0.2 1.8 hypothetical protein compare
MMJJ_RS08295 +0.2 1.9 iron ABC transporter substrate-binding protein compare
MMJJ_RS05700 +0.2 1.5 metallophosphoesterase compare
MMJJ_RS07200 +0.2 1.7 MFS transporter compare
MMJJ_RS05585 +0.2 1.4 hypothetical protein compare
MMJJ_RS06590 +0.2 1.7 sodium:alanine symporter family protein compare
MMJJ_RS05600 +0.2 1.9 sodium:solute symporter family protein compare
MMJJ_RS02230 +0.2 1.7 hypothetical protein compare
MMJJ_RS06735 +0.2 1.3 cobalt ECF transporter T component CbiQ compare
MMJJ_RS04510 +0.2 1.5 hypothetical protein compare
MMJJ_RS07985 +0.2 1.0 hypothetical protein compare
MMJJ_RS05355 +0.2 1.6 DUF2121 domain-containing protein compare
MMJJ_RS07775 +0.2 1.0 fluoride efflux transporter CrcB compare
MMJJ_RS07175 +0.2 1.7 DEAD/DEAH box helicase compare
MMJJ_RS07905 +0.2 1.4 DUF89 domain-containing protein compare
MMJJ_RS08870 +0.2 0.3 2-isopropylmalate synthase compare
MMJJ_RS08490 +0.2 0.7 rubrerythrin family protein compare
MMJJ_RS05350 +0.2 0.9 DUF192 domain-containing protein compare
MMJJ_RS01800 +0.2 1.5 ADP-ribosylglycohydrolase family protein compare
MMJJ_RS08445 +0.2 1.1 cell division ATPase MinD compare
MMJJ_RS06520 +0.2 1.5 TldD/PmbA family protein compare
MMJJ_RS03515 +0.2 1.0 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS05235 +0.2 1.7 Flp pilus assembly complex ATPase component TadA compare
MMJJ_RS02895 +0.2 1.5 ATP-binding protein compare
MMJJ_RS06285 +0.2 1.4 YchF/TatD family DNA exonuclease compare
MMJJ_RS06720 +0.2 1.2 mechanosensitive ion channel family protein compare
MMJJ_RS08860 +0.2 1.0 Rrf2 family transcriptional regulator compare
MMJJ_RS08455 +0.2 0.6 tetratricopeptide repeat protein compare
MMJJ_RS01735 +0.2 1.3 rubrerythrin family protein compare
MMJJ_RS04625 +0.2 1.5 SLC13 family permease compare
MMJJ_RS01140 +0.2 0.8 helix-turn-helix domain-containing protein compare
MMJJ_RS01055 +0.2 1.0 hypothetical protein compare
MMJJ_RS02665 +0.2 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS05200 +0.2 1.3 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS05150 +0.2 1.3 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS09265 +0.2 0.6 hypothetical protein compare
MMJJ_RS06810 +0.2 1.2 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS06675 +0.2 1.2 TIGR01212 family radical SAM protein compare
MMJJ_RS07215 +0.2 1.4 TIGR00341 family protein compare
MMJJ_RS05705 +0.2 1.3 hypothetical protein compare
MMJJ_RS07385 +0.2 1.2 ribosomal protein S18-alanine N-acetyltransferase compare
MMJJ_RS07830 +0.2 1.2 DUF1786 domain-containing protein compare
MMJJ_RS08685 +0.2 1.1 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS06445 +0.2 1.4 hypothetical protein compare
MMJJ_RS08255 +0.2 1.2 GNAT family N-acetyltransferase compare
MMJJ_RS00810 +0.2 1.2 GTP-binding protein compare
MMJJ_RS08070 +0.2 1.2 alpha-glucan family phosphorylase compare
MMJJ_RS03415 +0.2 0.8 hypothetical protein compare
MMJJ_RS00870 +0.2 0.9 F420-nonreducing hydrogenase compare
MMJJ_RS03720 +0.2 1.2 DsrE family protein compare
MMJJ_RS00500 +0.2 0.4 GNAT family N-acetyltransferase compare
MMJJ_RS07685 +0.2 1.3 glycogen/starch synthase compare
MMJJ_RS05085 +0.2 1.0 hypothetical protein compare
MMJJ_RS08375 +0.2 1.0 ferritin compare
MMJJ_RS01790 +0.2 0.9 pyridoxamine 5'-phosphate oxidase family protein compare
MMJJ_RS09205 +0.2 0.7 hypothetical protein compare
MMJJ_RS08360 +0.2 1.3 FprA family A-type flavoprotein compare
MMJJ_RS06160 +0.2 1.3 stage II sporulation protein M compare
MMJJ_RS08270 +0.2 1.2 iron ABC transporter substrate-binding protein compare
MMJJ_RS00900 +0.2 0.7 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS05660 +0.2 0.9 sulfopyruvate decarboxylase subunit beta compare
MMJJ_RS00630 +0.2 1.0 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS00890 +0.2 1.1 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS03805 +0.2 0.5 hypothetical protein compare
MMJJ_RS08345 +0.2 1.2 flavodoxin family protein compare
MMJJ_RS05405 +0.2 1.1 DNA cytosine methyltransferase compare
MMJJ_RS00975 +0.2 1.1 iron-containing alcohol dehydrogenase compare
MMJJ_RS04420 +0.2 1.0 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family compare
MMJJ_RS08720 +0.2 1.3 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS02950 +0.2 1.1 epoxyqueuosine reductase compare
MMJJ_RS02295 +0.2 1.3 hypothetical protein compare
MMJJ_RS06455 +0.2 1.0 YeeE/YedE family protein compare
MMJJ_RS05900 +0.2 1.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS08410 +0.2 0.4 CBS domain-containing protein compare
MMJJ_RS08565 +0.2 1.3 ATP-binding protein compare
MMJJ_RS04390 +0.2 1.1 rhomboid family intramembrane serine protease compare
MMJJ_RS02880 +0.2 0.9 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms