Experiment set4IT074 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A with Sodium Chloride 300 mM

200 most important genes:

  gene name fitness t score description  
RR42_RS33255 -5.4 -3.6 protein-tyrosine phosphatase compare
RR42_RS05955 -4.3 -1.8 hypothetical protein compare
RR42_RS04810 -4.2 -4.1 glycine/betaine ABC transporter permease compare
RR42_RS18305 -4.0 -3.8 anthranilate phosphoribosyltransferase compare
RR42_RS20195 -3.9 -1.6 ATPase F0F1 compare
RR42_RS01780 -3.9 -10.0 glutathione synthetase compare
RR42_RS21220 -3.8 -2.4 iron transporter FeoB compare
RR42_RS37400 -3.7 -1.6 6-phosphogluconolactonase compare
RR42_RS02420 -3.7 -1.5 SAM-dependent methyltransferase compare
RR42_RS18855 -3.6 -3.5 preprotein translocase compare
RR42_RS19885 -3.5 -2.4 aminoglycoside transporter compare
RR42_RS06255 -3.4 -2.6 lipoprotein compare
RR42_RS01775 -3.4 -4.9 glutamate--cysteine ligase compare
RR42_RS04815 -3.4 -6.3 glycine/betaine ABC transporter substrate-binding protein conserved
RR42_RS02810 -3.3 -3.2 acyl-phosphate glycerol 3-phosphate acyltransferase compare
RR42_RS18850 -3.3 -3.5 preprotein translocase subunit TatC compare
RR42_RS14080 -3.2 -9.8 RNA polymerase sigma factor RpoE compare
RR42_RS00790 -3.2 -7.7 chemotaxis protein CheY compare
RR42_RS07125 -3.1 -2.8 hypothetical protein compare
RR42_RS08175 -3.1 -1.8 hypothetical protein compare
RR42_RS15460 -3.0 -5.7 translocation protein TolB compare
RR42_RS06095 -3.0 -3.3 hypothetical protein compare
RR42_RS04825 -2.9 -6.8 glycine/betaine ABC transporter ATP-binding protein conserved
RR42_RS26900 -2.9 -2.5 enoyl-CoA hydratase compare
RR42_RS04820 -2.8 -4.5 choline ABC transporter permease compare
RR42_RS14360 -2.8 -1.6 tryptophan synthase subunit alpha compare
RR42_RS07555 -2.8 -2.4 potassium transporter Kup compare
RR42_RS19005 -2.8 -5.4 3-dehydroquinate synthase compare
RR42_RS18930 -2.7 -4.4 BolA family transcriptional regulator compare
RR42_RS33260 -2.7 -7.2 multidrug MFS transporter compare
RR42_RS18970 -2.6 -10.6 toluene ABC transporter ATP-binding protein compare
RR42_RS09015 -2.6 -4.1 trigger factor compare
RR42_RS07090 -2.6 -2.8 hypothetical protein compare
RR42_RS01920 -2.5 -3.8 protoheme IX farnesyltransferase compare
RR42_RS00715 -2.5 -2.4 ferritin compare
RR42_RS12050 -2.5 -8.0 DNA polymerase compare
RR42_RS04325 -2.4 -2.2 membrane protein compare
RR42_RS01680 -2.4 -7.7 cytochrome C550 compare
RR42_RS31530 -2.4 -0.9 histidine kinase compare
RR42_RS18965 -2.4 -10.6 ABC transporter permease compare
RR42_RS05860 -2.4 -2.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
RR42_RS15755 -2.3 -2.6 acetyltransferase compare
RR42_RS15845 -2.3 -2.5 biotin transporter BioY compare
RR42_RS35875 -2.3 -8.2 UDP-galactose-4-epimerase compare
RR42_RS18960 -2.3 -11.3 ABC transporter substrate-binding protein compare
RR42_RS15475 -2.3 -5.6 protein tolQ compare
RR42_RS15770 -2.2 -3.9 hypothetical protein compare
RR42_RS20205 -2.2 -2.9 chromosome partitioning protein compare
RR42_RS25470 -2.2 -1.5 alpha/beta hydrolase compare
RR42_RS33250 -2.1 -6.3 tyrosine protein kinase compare
RR42_RS03415 -2.1 -3.3 N-acetylmuramoyl-L-alanine amidase compare
RR42_RS31910 -2.0 -2.2 acyl-CoA dehydrogenase compare
RR42_RS18950 -2.0 -7.6 hypothetical protein compare
RR42_RS26935 -2.0 -3.8 farnesyl-diphosphate farnesyltransferase compare
RR42_RS24980 -2.0 -1.6 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase compare
RR42_RS18270 -2.0 -2.9 murein transglycosylase compare
RR42_RS10365 -1.9 -2.7 ABC transporter compare
RR42_RS29610 -1.9 -1.8 cytochrome C2 compare
RR42_RS02705 -1.9 -2.5 Holliday junction DNA helicase RuvA compare
RR42_RS06485 -1.9 -5.8 chorismate synthase compare
RR42_RS17620 -1.9 -3.3 phosphatidylglycerophosphatase compare
RR42_RS03080 -1.9 -3.6 recombinase RecA compare
RR42_RS21075 -1.9 -1.3 phosphoribosyltransferase compare
RR42_RS15745 -1.9 -4.8 group1 glycosyl transferase compare
RR42_RS15775 -1.8 -3.7 N-acetylneuraminate synthase compare
RR42_RS06450 -1.8 -6.4 membrane protein compare
RR42_RS36450 -1.8 -1.5 acyl dehydratase compare
RR42_RS01255 -1.8 -6.6 lauroyl acyltransferase compare
RR42_RS02060 -1.8 -7.8 nucleotide-binding protein compare
RR42_RS23305 -1.8 -1.8 hypothetical protein compare
RR42_RS02665 -1.8 -11.2 peptidase compare
RR42_RS07615 -1.8 -1.7 3-ketoacyl-ACP reductase compare
RR42_RS32595 -1.7 -4.8 cytochrome o ubiquinol oxidase subunit I compare
RR42_RS33215 -1.7 -7.0 transferase compare
RR42_RS05420 -1.7 -3.1 membrane protein compare
RR42_RS16675 -1.7 -1.6 hypothetical protein compare
RR42_RS01845 -1.6 -1.4 glycerol-3-phosphate dehydrogenase compare
RR42_RS33575 -1.6 -1.9 hypothetical protein compare
RR42_RS19900 -1.6 -1.9 MerR family transcriptional regulator compare
RR42_RS08025 -1.6 -1.8 phage Gp37Gp68 compare
RR42_RS12925 -1.6 -1.7 ATPase compare
RR42_RS03370 -1.6 -1.4 fructose ABC transporter, substrate-binding component (FrcB) (from data) compare
RR42_RS15785 -1.6 -6.7 glycosyl transferase family 28 compare
RR42_RS33240 -1.6 -9.2 GDP-L-fucose synthase compare
RR42_RS01405 -1.6 -10.2 lytic transglycosylase compare
RR42_RS15455 -1.6 -4.6 membrane protein compare
RR42_RS32085 -1.6 -1.3 hypothetical protein compare
RR42_RS04475 -1.6 -7.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
RR42_RS15750 -1.6 -4.8 hypothetical protein compare
RR42_RS16240 -1.6 -1.4 cobalamin biosynthesis protein CbiX compare
RR42_RS33210 -1.6 -3.8 teichoic acid biosynthesis protein compare
RR42_RS28915 -1.6 -3.9 membrane protein compare
RR42_RS13565 -1.5 -10.0 lytic transglycosylase compare
RR42_RS13365 -1.5 -1.6 peptidase P60 compare
RR42_RS06875 -1.5 -1.9 hypothetical protein compare
RR42_RS07410 -1.5 -4.8 peptidase S11 compare
RR42_RS17390 -1.5 -3.5 ATP-dependent DNA helicase RecG compare
RR42_RS04145 -1.5 -1.1 peptidase A24 compare
RR42_RS19090 -1.5 -1.4 cytochrome C compare
RR42_RS15720 -1.5 -4.1 hypothetical protein compare
RR42_RS09560 -1.5 -4.0 hypothetical protein compare
RR42_RS15465 -1.5 -2.3 TonB-dependent receptor compare
RR42_RS13040 -1.5 -4.4 iron transporter compare
RR42_RS19695 -1.5 -2.0 cytochrome C protein compare
RR42_RS18840 -1.5 -2.4 2-alkenal reductase compare
RR42_RS07120 -1.5 -2.6 hypothetical protein compare
RR42_RS10910 -1.4 -5.6 aminodeoxychorismate lyase compare
RR42_RS05290 -1.4 -2.5 ankyrin compare
RR42_RS13800 -1.4 -4.9 formyltetrahydrofolate deformylase compare
RR42_RS14365 -1.4 -1.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
RR42_RS24665 -1.4 -1.6 hypothetical protein compare
RR42_RS15890 -1.4 -3.8 heme biosynthesis protein HemY compare
RR42_RS15895 -1.4 -4.2 uroporphyrinogen III methyltransferase compare
RR42_RS17930 -1.4 -3.6 RNA pyrophosphohydrolase compare
RR42_RS13130 -1.4 -2.1 membrane protein compare
RR42_RS28885 -1.4 -3.3 membrane protein compare
RR42_RS04735 -1.4 -1.4 hypothetical protein compare
RR42_RS31995 -1.4 -2.5 flavin reductase compare
RR42_RS13910 -1.4 -5.0 glutamate racemase compare
RR42_RS04700 -1.4 -1.1 ribonuclease G compare
RR42_RS31435 -1.4 -1.4 hypothetical protein compare
RR42_RS17885 -1.4 -4.4 ABC transporter permease compare
RR42_RS15790 -1.4 -3.2 aminotransferase class III compare
RR42_RS15810 -1.4 -1.5 UDP-N-acetylglucosamine 4,6-dehydratase compare
RR42_RS15825 -1.4 -6.0 capsular biosynthesis protein compare
RR42_RS33235 -1.4 -5.3 GDP-mannose 4,6-dehydratase compare
RR42_RS07365 -1.4 -2.3 pyruvate dehydrogenase compare
RR42_RS27320 -1.3 -1.0 ferredoxin compare
RR42_RS24930 -1.3 -1.1 AraC family transcriptional regulator compare
RR42_RS35240 -1.3 -1.7 acyl-CoA dehydrogenase compare
RR42_RS12240 -1.3 -0.9 hypothetical protein compare
RR42_RS01505 -1.3 -1.6 tRNA-Cys compare
RR42_RS33245 -1.3 -4.7 mannose-1-phosphate guanyltransferase compare
RR42_RS20440 -1.3 -1.3 histidine kinase compare
RR42_RS27915 -1.3 -1.4 acyl-CoA synthetase compare
RR42_RS18945 -1.3 -2.5 toluene tolerance protein compare
RR42_RS31820 -1.3 -2.6 short-chain dehydrogenase compare
RR42_RS12615 -1.3 -2.1 LexA family transcriptional regulator compare
RR42_RS21720 -1.3 -1.6 acetoin catabolism protein X compare
RR42_RS22495 -1.3 -2.2 hypothetical protein compare
RR42_RS06270 -1.3 -3.8 cupin compare
RR42_RS03170 -1.3 -5.6 hypothetical protein compare
RR42_RS05790 -1.2 -3.4 lipoprotein compare
RR42_RS16525 -1.2 -2.2 anti-sigma factor compare
RR42_RS19655 -1.2 -1.2 tRNA-Ala compare
RR42_RS15090 -1.2 -2.8 DNA helicase compare
RR42_RS14790 -1.2 -6.7 cobalamin biosynthesis protein CobD compare
RR42_RS30410 -1.2 -1.9 hypothetical protein compare
RR42_RS15120 -1.2 -1.5 4-oxalocrotonate tautomerase compare
RR42_RS27470 -1.2 -1.0 peroxiredoxin OsmC compare
RR42_RS25785 -1.2 -1.5 TetR family transcriptional regulator compare
RR42_RS14985 -1.2 -1.5 30S ribosomal protein S21 compare
RR42_RS13145 -1.2 -1.1 DNA-binding protein compare
RR42_RS08000 -1.2 -1.0 hypothetical protein compare
RR42_RS15905 -1.2 -5.7 phosphoenolpyruvate carboxylase compare
RR42_RS00360 -1.2 -2.0 Asp/Glu/hydantoin racemase compare
RR42_RS08575 -1.2 -1.0 tail protein compare
RR42_RS17880 -1.2 -1.0 hypothetical protein compare
RR42_RS18020 -1.2 -2.0 ornithine acetyltransferase compare
RR42_RS32600 -1.2 -3.1 cytochrome O ubiquinol oxidase subunit II compare
RR42_RS29315 -1.2 -5.4 AcrR family transcriptional regulator compare
RR42_RS01925 -1.2 -4.6 photosynthetic protein synthase I compare
RR42_RS07620 -1.1 -4.5 polyhydroxyalkanoate synthesis repressor PhaR compare
RR42_RS17105 -1.1 -4.7 Clp protease ClpX compare
RR42_RS33195 -1.1 -5.4 UDP-sugar lipid carrier transferase compare
RR42_RS34650 -1.1 -3.4 LacI family transcriptional regulator compare
RR42_RS31920 -1.1 -1.2 acetyl-CoA acetyltransferase compare
RR42_RS11770 -1.1 -1.5 cyclase compare
RR42_RS04535 -1.1 -2.2 cysteine synthase compare
RR42_RS27710 -1.1 -2.1 LysR family transcriptional regulator compare
RR42_RS01095 -1.1 -1.6 membrane protein compare
RR42_RS08185 -1.1 -1.3 hypothetical protein compare
RR42_RS21435 -1.1 -2.5 hypothetical protein compare
RR42_RS24605 -1.1 -5.3 TetR family transcriptional regulator compare
RR42_RS11280 -1.1 -1.0 phenylacetic acid degradation protein compare
RR42_RS14085 -1.1 -2.0 hypothetical protein compare
RR42_RS33425 -1.1 -2.5 cobalt-zinc-cadmium resistance protein compare
RR42_RS18140 -1.1 -1.2 MarR family transcriptional regulator compare
RR42_RS11785 -1.1 -1.6 NfeD-like family protein 1 compare
RR42_RS03320 -1.1 -1.9 transcriptional regulator compare
RR42_RS05425 -1.1 -3.5 membrane protein compare
RR42_RS36120 -1.1 -4.2 LysR family transcriptional regulator compare
RR42_RS20570 -1.1 -1.0 biopolymer transporter ExbD compare
RR42_RS01690 -1.1 -2.0 ferredoxin compare
RR42_RS34685 -1.1 -3.6 catechol 1,2-dioxygenase compare
RR42_RS06325 -1.1 -1.4 serine O-acetyltransferase compare
RR42_RS08110 -1.1 -1.5 hypothetical protein compare
RR42_RS17730 -1.1 -1.2 hypothetical protein compare
RR42_RS37420 -1.1 -2.6 AraC family transcriptional regulator compare
RR42_RS02440 -1.0 -1.1 membrane protein compare
RR42_RS35725 -1.0 -1.9 flagellar biosynthesis protein FlgB compare
RR42_RS04320 -1.0 -3.6 cell division protein FtsK compare
RR42_RS02500 -1.0 -1.2 TetR family transcriptional regulator compare
RR42_RS17685 -1.0 -5.2 alkyl hydroperoxide reductase compare
RR42_RS18820 -1.0 -3.1 cytochrome B compare
RR42_RS13200 -1.0 -5.2 stationary phase survival protein SurE compare
RR42_RS03635 -1.0 -1.9 trypsin-like serine protease compare
RR42_RS21295 -1.0 -1.8 L-lactate dehydrogenase, LutA subunit (from data) compare
RR42_RS01910 -1.0 -3.4 cytochrome C oxidase subunit I compare
RR42_RS18315 -1.0 -2.0 toxin compare


Specific Phenotypes

For 6 genes in this experiment

For stress Sodium Chloride in Cupriavidus basilensis FW507-4G11

For stress Sodium Chloride across organisms