Experiment set4IT074 for Cupriavidus basilensis FW507-4G11

Compare to:

R2A with Sodium Chloride 300 mM

200 most detrimental genes:

  gene name fitness t score description  
RR42_RS08210 +1.5 1.9 hypothetical protein compare
RR42_RS01785 +1.4 4.0 PTS fructose transporter subunit IIA compare
RR42_RS22590 +1.4 2.0 organic hydroperoxide resistance protein compare
RR42_RS16535 +1.3 5.1 hypothetical protein compare
RR42_RS25455 +1.3 2.4 acetyl-CoA acetyltransferase compare
RR42_RS03925 +1.2 2.5 hypothetical protein compare
RR42_RS29280 +1.2 2.0 hypothetical protein compare
RR42_RS26350 +1.2 2.6 bleomycin resistance protein compare
RR42_RS01485 +1.1 2.9 phosphonate transporter compare
RR42_RS09580 +1.1 1.6 hypothetical protein compare
RR42_RS21380 +1.1 1.7 cupin compare
RR42_RS04060 +1.1 3.5 hypothetical protein compare
RR42_RS24510 +1.1 2.3 hypothetical protein compare
RR42_RS13620 +1.0 1.5 ferredoxin compare
RR42_RS18425 +1.0 1.1 hypothetical protein compare
RR42_RS22030 +0.9 2.9 hypothetical protein compare
RR42_RS23880 +0.9 1.6 hypothetical protein compare
RR42_RS28400 +0.9 1.4 CoA-transferase compare
RR42_RS01795 +0.9 5.6 phosphoenolpyruvate-protein phosphotransferase compare
RR42_RS16640 +0.9 1.3 LysR family transcriptional regulator compare
RR42_RS22275 +0.9 1.1 hypothetical protein compare
RR42_RS16185 +0.9 3.5 malonyl-CoA decarboxylase compare
RR42_RS06735 +0.9 1.9 hypothetical protein compare
RR42_RS17425 +0.9 6.5 chemotaxis protein CheY compare
RR42_RS00440 +0.8 1.1 hypothetical protein compare
RR42_RS24520 +0.8 2.5 hypothetical protein compare
RR42_RS10315 +0.8 2.7 short-chain dehydrogenase compare
RR42_RS00600 +0.8 0.7 DeoR family transcriptional regulator compare
RR42_RS13865 +0.8 1.5 hypothetical protein compare
RR42_RS26725 +0.8 1.5 diguanylate cyclase compare
RR42_RS08505 +0.8 2.1 DNA-binding protein compare
RR42_RS03085 +0.8 1.0 RecX family transcriptional regulator compare
RR42_RS19785 +0.8 2.1 allantoate amidohydrolase compare
RR42_RS36940 +0.8 1.2 alcohol dehydrogenase compare
RR42_RS21955 +0.8 1.2 hypothetical protein compare
RR42_RS19555 +0.8 1.4 hypothetical protein compare
RR42_RS32555 +0.8 2.0 nitrilotriacetate monooxygenase compare
RR42_RS14895 +0.8 2.5 peptidase compare
RR42_RS32670 +0.8 1.5 phenol hydroxylase compare
RR42_RS06710 +0.8 2.1 hypothetical protein compare
RR42_RS22250 +0.7 1.6 hypothetical protein compare
RR42_RS34520 +0.7 1.0 transposase compare
RR42_RS15015 +0.7 0.9 exodeoxyribonuclease VII small subunit compare
RR42_RS14735 +0.7 1.9 membrane protein compare
RR42_RS31495 +0.7 1.4 Cro/Cl family transcriptional regulator compare
RR42_RS10515 +0.7 2.0 fumarylacetoacetate hydrolase compare
RR42_RS32870 +0.7 1.5 stress responsive protein compare
RR42_RS07995 +0.7 1.4 hypothetical protein compare
RR42_RS16685 +0.7 2.4 tRNA-Leu compare
RR42_RS13540 +0.7 2.8 acyl-CoA dehydrogenase compare
RR42_RS25625 +0.7 1.6 LysR family transcriptional regulator compare
RR42_RS06170 +0.7 3.3 hypothetical protein compare
RR42_RS11085 +0.7 2.9 acetyl-CoA acetyltransferase compare
RR42_RS25660 +0.7 2.6 cytochrome C biogenesis protein compare
RR42_RS21325 +0.7 2.2 ethanolamine ammonia-lyase compare
RR42_RS15225 +0.7 1.0 RNA-binding protein compare
RR42_RS22145 +0.7 1.8 amine dehydrogenase compare
RR42_RS29040 +0.7 1.4 histidyl-tRNA synthetase compare
RR42_RS32495 +0.7 1.2 shikimate kinase compare
RR42_RS25650 +0.7 1.1 hypothetical protein compare
RR42_RS35900 +0.7 4.2 hypothetical protein compare
RR42_RS19750 +0.7 1.3 MBL fold metallo-hydrolase compare
RR42_RS22070 +0.7 1.6 type IV secretion protein Rhs compare
RR42_RS01380 +0.7 1.9 membrane protein compare
RR42_RS36835 +0.6 1.4 cytochrome P450 compare
RR42_RS11580 +0.6 1.7 hypothetical protein compare
RR42_RS11410 +0.6 1.4 hypothetical protein compare
RR42_RS01385 +0.6 2.3 5,10-methylenetetrahydrofolate reductase compare
RR42_RS31830 +0.6 1.3 short-chain dehydrogenase compare
RR42_RS23420 +0.6 1.8 3-oxoacyl-ACP reductase compare
RR42_RS06000 +0.6 0.7 antibiotic biosynthesis monooxygenase compare
RR42_RS23250 +0.6 2.0 glyoxalase compare
RR42_RS12580 +0.6 0.8 phosphate transport regulator compare
RR42_RS26730 +0.6 2.0 Fe-S oxidoreductase compare
RR42_RS28125 +0.6 2.3 hypothetical protein compare
RR42_RS26275 +0.6 1.3 CopG family transcriptional regulator compare
RR42_RS23460 +0.6 0.9 alpha/beta hydrolase compare
RR42_RS07140 +0.6 1.0 hypothetical protein compare
RR42_RS20575 +0.6 0.9 hypothetical protein compare
RR42_RS23040 +0.6 2.2 hypothetical protein compare
RR42_RS06245 +0.6 2.2 SAM-dependent methyltransferase compare
RR42_RS23540 +0.6 2.3 alpha-ketoglutarate-dependent dioxygenase compare
RR42_RS01500 +0.6 2.7 hypothetical protein compare
RR42_RS19675 +0.6 2.9 SoxA protein compare
RR42_RS12490 +0.6 2.6 branched-chain amino acid ABC transporter substrate-binding protein compare
RR42_RS34425 +0.6 1.6 hypothetical protein compare
RR42_RS16335 +0.6 0.7 hypothetical protein compare
RR42_RS20350 +0.6 1.1 hypothetical protein compare
RR42_RS26480 +0.6 2.7 alpha/beta hydrolase compare
RR42_RS18730 +0.6 1.3 hypothetical protein compare
RR42_RS08675 +0.6 2.7 hypothetical protein compare
RR42_RS05645 +0.6 1.9 urea ABC transporter ATP-binding protein compare
RR42_RS27045 +0.6 1.7 hypothetical protein compare
RR42_RS23990 +0.6 2.5 hypothetical protein compare
RR42_RS34395 +0.6 1.1 hypothetical protein compare
RR42_RS20790 +0.6 1.4 isoprenylcysteine carboxyl methyltransferase compare
RR42_RS27520 +0.6 1.6 hypothetical protein compare
RR42_RS05100 +0.6 2.2 acetaldehyde dehydrogenase compare
RR42_RS21505 +0.6 0.9 hypothetical protein compare
RR42_RS31550 +0.6 1.8 RND transporter compare
RR42_RS09495 +0.6 1.9 LacI family transcriptional regulator compare
RR42_RS36355 +0.6 1.3 (2Fe-2S)-binding protein compare
RR42_RS19625 +0.6 1.9 hypothetical protein compare
RR42_RS19600 +0.6 3.5 aromatic ring-opening dioxygenase LigB compare
RR42_RS26580 +0.6 1.0 hypothetical protein compare
RR42_RS01180 +0.5 2.4 acyl-CoA thioesterase compare
RR42_RS23690 +0.5 1.4 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase compare
RR42_RS32445 +0.5 1.2 shikimate dehydrogenase compare
RR42_RS10490 +0.5 1.4 DNA-binding protein compare
RR42_RS04955 +0.5 0.7 hypothetical protein compare
RR42_RS04135 +0.5 0.8 pilus assembly protein CpaB compare
RR42_RS06405 +0.5 1.6 membrane protein compare
RR42_RS01325 +0.5 2.5 hypothetical protein compare
RR42_RS21055 +0.5 1.9 excisionase compare
RR42_RS03820 +0.5 2.0 molybdenum cofactor biosynthesis protein MoaA compare
RR42_RS22535 +0.5 1.1 ArsR family transcriptional regulator compare
RR42_RS08635 +0.5 1.6 terminase compare
RR42_RS24180 +0.5 1.5 3-isopropylmalate dehydratase compare
RR42_RS02460 +0.5 3.1 LysR family transcriptional regulator compare
RR42_RS22165 +0.5 0.9 hypothetical protein compare
RR42_RS01630 +0.5 0.5 branched-chain amino acid ABC transporter ATP-binding protein compare
RR42_RS22360 +0.5 0.6 hypothetical protein compare
RR42_RS07040 +0.5 1.8 hypothetical protein compare
RR42_RS35190 +0.5 2.9 LacI family transcriptional regulator compare
RR42_RS32505 +0.5 1.5 sulfonate ABC transporter ATP-binding protein compare
RR42_RS16790 +0.5 2.6 enoyl-CoA hydratase compare
RR42_RS14930 +0.5 1.4 biopolymer transporter ExbD compare
RR42_RS15740 +0.5 0.8 hypothetical protein compare
RR42_RS07150 +0.5 0.8 hypothetical protein compare
RR42_RS17430 +0.5 4.0 histidine kinase compare
RR42_RS03110 +0.5 2.0 pilus assembly protein TapA compare
RR42_RS10410 +0.5 1.1 hypothetical protein compare
RR42_RS24500 +0.5 2.3 hypothetical protein compare
RR42_RS13460 +0.5 2.3 phosphate transporter permease subunit PtsA compare
RR42_RS30625 +0.5 1.8 cob(II)yrinic acid a,c-diamide reductase compare
RR42_RS13825 +0.5 1.2 hypothetical protein compare
RR42_RS26435 +0.5 1.0 ferredoxin compare
RR42_RS00235 +0.5 1.2 membrane protein compare
RR42_RS15535 +0.5 1.4 hypothetical protein compare
RR42_RS03525 +0.5 1.2 type VI secretion system effector compare
RR42_RS18505 +0.5 2.7 saccharopine dehydrogenase compare
RR42_RS10420 +0.5 2.4 hypothetical protein compare
RR42_RS25380 +0.5 1.4 acetyl-CoA acetyltransferase compare
RR42_RS25645 +0.5 1.8 hypothetical protein compare
RR42_RS36680 +0.5 2.0 hypothetical protein compare
RR42_RS26060 +0.5 1.4 Fis family transcriptional regulator compare
RR42_RS24965 +0.5 2.3 acyl-CoA dehydrogenase compare
RR42_RS16265 +0.5 0.9 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
RR42_RS36715 +0.5 2.3 alanine acetyltransferase compare
RR42_RS27415 +0.5 2.3 microcin ABC transporter ATP-binding protein compare
RR42_RS27050 +0.5 1.2 transporter compare
RR42_RS09590 +0.5 1.3 hypothetical protein compare
RR42_RS33660 +0.5 1.1 dihydrofolate reductase compare
RR42_RS27090 +0.5 0.7 chemotaxis protein CheV compare
RR42_RS03695 +0.5 2.1 hypothetical protein compare
RR42_RS14525 +0.5 2.7 cysteine synthase compare
RR42_RS05145 +0.5 1.6 glyoxalase compare
RR42_RS30345 +0.5 1.3 XRE family transcriptional regulator compare
RR42_RS04275 +0.5 1.2 hypothetical protein compare
RR42_RS26440 +0.5 2.2 ABC transporter permease compare
RR42_RS20910 +0.5 2.3 hypothetical protein compare
RR42_RS04015 +0.5 0.8 RNA polymerase sigma factor compare
RR42_RS11660 +0.5 1.0 hypothetical protein compare
RR42_RS09530 +0.5 1.9 hypothetical protein compare
RR42_RS13465 +0.5 1.2 phosphate transporter permease subunit PstC compare
RR42_RS16910 +0.5 0.7 histidine utilization protein HutD compare
RR42_RS29110 +0.5 2.0 peroxiredoxin compare
RR42_RS05410 +0.5 1.1 acetyltransferase compare
RR42_RS08300 +0.5 1.8 hypothetical protein compare
RR42_RS25640 +0.5 1.0 3-hydroxyisobutyrate dehydrogenase compare
RR42_RS19685 +0.5 0.7 thiosulfate oxidation carrier complex protein SoxZ compare
RR42_RS19765 +0.5 0.6 arsenate reductase compare
RR42_RS20285 +0.5 1.3 amino acid ABC transporter ATP-binding protein compare
RR42_RS15525 +0.5 0.5 hypothetical protein compare
RR42_RS29360 +0.5 1.7 glyoxalase compare
RR42_RS31825 +0.5 1.3 3-oxoacyl-ACP reductase compare
RR42_RS14500 +0.5 2.2 SAM-dependent methyltransferase compare
RR42_RS09290 +0.5 0.9 hypothetical protein compare
RR42_RS34440 +0.5 1.2 hypothetical protein compare
RR42_RS10250 +0.5 1.2 enoyl-CoA hydratase compare
RR42_RS08860 +0.4 1.6 radical SAM protein compare
RR42_RS17635 +0.4 1.3 magnesium transporter CorA compare
RR42_RS22185 +0.4 1.9 LysR family transcriptional regulator compare
RR42_RS12165 +0.4 2.4 molecular chaperone compare
RR42_RS01525 +0.4 1.7 LacI family transcriptional regulator compare
RR42_RS27060 +0.4 0.7 cation transporter compare
RR42_RS04255 +0.4 0.6 chemotaxis protein CheW compare
RR42_RS32770 +0.4 1.8 transglycosylase compare
RR42_RS26590 +0.4 0.7 hypothetical protein compare
RR42_RS10310 +0.4 0.6 NADPH:quinone reductase compare
RR42_RS34325 +0.4 1.8 hypothetical protein compare
RR42_RS11680 +0.4 1.0 hypothetical protein compare
RR42_RS11210 +0.4 1.2 microcystin LR degradation protein MlrC compare
RR42_RS07265 +0.4 0.9 hypothetical protein compare
RR42_RS16545 +0.4 1.5 prolyl-tRNA synthetase compare
RR42_RS36660 +0.4 1.1 GntR family transcriptional regulator compare
RR42_RS24490 +0.4 1.2 hypothetical protein compare
RR42_RS35335 +0.4 1.5 hypothetical protein compare
RR42_RS12570 +0.4 2.8 peptidase P60 compare
RR42_RS07945 +0.4 1.5 ABC transporter permease compare


Specific Phenotypes

For 6 genes in this experiment

For stress Sodium Chloride in Cupriavidus basilensis FW507-4G11

For stress Sodium Chloride across organisms