Experiment set4IT070 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Temperature shift 30_to_34; with MOPS

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS14050 +1.4 2.3 hypothetical protein compare
PFLU_RS14715 +1.4 6.3 protein-glutamate O-methyltransferase CheR compare
PFLU_RS21795 +1.3 12.0 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS07235 +1.2 5.2 sigma factor AlgU negative regulatory protein compare
PFLU_RS20730 +1.2 2.3 hypothetical protein compare
PFLU_RS03075 +1.2 2.8 translation initiation factor Sui1 compare
PFLU_RS02585 +1.1 6.3 protease modulator HflC compare
PFLU_RS00040 +1.1 8.9 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS22535 +1.0 8.7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
PFLU_RS21860 +1.0 6.4 flagellar basal body rod protein FlgF compare
PFLU_RS21845 +1.0 7.4 flagellar basal body P-ring protein FlgI compare
PFLU_RS21780 +1.0 4.1 flagellar hook-basal body complex protein FliE compare
PFLU_RS11380 +1.0 2.0 sarcosine oxidase subunit delta compare
PFLU_RS21695 +1.0 6.1 flagellar biosynthesis protein FlhB compare
PFLU_RS21735 +1.0 8.0 flagellar hook-length control protein FliK compare
PFLU_RS30590 +1.0 2.0 hypothetical protein compare
PFLU_RS15205 +1.0 2.1 ribose ABC transporter permease compare
PFLU_RS21700 +1.0 6.4 flagellar type III secretion system protein FliR compare
PFLU_RS21755 +1.0 6.3 flagella biosynthesis chaperone FliJ compare
PFLU_RS23180 +0.9 6.3 flagellar basal body rod protein FlgB compare
PFLU_RS21660 +0.9 8.0 RNA polymerase sigma factor FliA compare
PFLU_RS31490 +0.9 2.0 hypothetical protein compare
PFLU_RS13180 +0.9 3.7 hypothetical protein compare
PFLU_RS21840 +0.9 6.3 flagellar assembly peptidoglycan hydrolase FlgJ compare
PFLU_RS01875 +0.9 1.6 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS21855 +0.9 6.1 flagellar basal-body rod protein FlgG compare
PFLU_RS25215 +0.9 6.3 cytochrome o ubiquinol oxidase subunit I compare
PFLU_RS31830 +0.9 1.3 hypothetical protein compare
PFLU_RS23195 +0.9 7.9 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS21850 +0.9 7.1 flagellar basal body L-ring protein FlgH compare
PFLU_RS01480 +0.9 7.8 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB compare
PFLU_RS14995 +0.9 2.1 response regulator transcription factor compare
PFLU_RS01490 +0.9 7.9 cellulose biosynthesis protein BcsC compare
PFLU_RS22520 +0.9 2.4 GntR family transcriptional regulator compare
PFLU_RS21835 +0.9 7.4 flagellar hook-associated protein FlgK compare
PFLU_RS18550 +0.9 5.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFLU_RS21710 +0.8 5.7 flagellar type III secretion system pore protein FliP compare
PFLU_RS21575 +0.8 2.7 pyrimidine/purine nucleoside phosphorylase compare
PFLU_RS01475 +0.8 7.6 UDP-forming cellulose synthase catalytic subunit compare
PFLU_RS02455 +0.8 2.3 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS21810 +0.8 7.6 flagellar filament capping protein FliD compare
PFLU_RS21805 +0.8 6.6 flagellar export chaperone FliS compare
PFLU_RS30630 +0.8 1.0 hypothetical protein compare
PFLU_RS00460 +0.8 6.0 glutamate/aspartate:proton symporter GltP compare
PFLU_RS25340 +0.8 7.0 glycosyltransferase family 1 protein compare
PFLU_RS12740 +0.8 1.5 BcpO-related WXXGXW repeat protein compare
PFLU_RS12915 +0.8 1.9 methyltransferase domain-containing protein compare
PFLU_RS23175 +0.8 5.2 flagellar basal body rod protein FlgC compare
PFLU_RS10340 +0.8 2.1 hypothetical protein compare
PFLU_RS23205 +0.8 5.7 flagellar protein FlgN compare
PFLU_RS18820 +0.8 2.4 acyl-CoA dehydrogenase compare
PFLU_RS23325 +0.8 5.4 GlxA family transcriptional regulator compare
PFLU_RS23165 +0.8 7.0 flagellar hook protein FlgE compare
PFLU_RS29810 +0.7 4.9 LysR family transcriptional regulator compare
PFLU_RS24860 +0.7 1.5 Fe-S cluster assembly transcriptional regulator IscR compare
PFLU_RS01470 +0.7 4.8 cellulose synthase operon protein YhjQ compare
PFLU_RS25200 +0.7 4.2 protoheme IX farnesyltransferase compare
PFLU_RS21830 +0.7 6.8 flagellar hook-associated protein 3 compare
PFLU_RS14250 +0.7 3.2 MFS transporter compare
PFLU_RS30390 +0.7 2.0 type III secretion system rspB compare
PFLU_RS21760 +0.7 5.8 flagellar protein export ATPase FliI compare
PFLU_RS16865 +0.7 2.3 hypothetical protein compare
PFLU_RS14235 +0.7 2.8 iron transporter compare
PFLU_RS31825 +0.7 2.3 hypothetical protein compare
PFLU_RS11885 +0.7 1.3 type II secretion system protein M compare
PFLU_RS25210 +0.7 3.3 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS08490 +0.7 0.6 DEAD/DEAH box helicase compare
PFLU_RS22250 +0.7 1.7 hypothetical protein compare
PFLU_RS15160 +0.7 3.1 beta-ketoacyl-ACP synthase II compare
PFLU_RS17265 +0.7 1.2 hypothetical protein compare
PFLU_RS21705 +0.7 4.0 flagellar biosynthesis protein FliQ compare
PFLU_RS16310 +0.7 1.5 hypothetical protein compare
PFLU_RS24695 +0.7 1.3 PTS glucose transporter subunit IIB compare
PFLU_RS02580 +0.7 4.9 FtsH protease activity modulator HflK compare
PFLU_RS21675 +0.6 5.5 flagellar biosynthesis protein FlhA compare
PFLU_RS15760 +0.6 2.1 general secretion pathway protein GspL compare
PFLU_RS27465 +0.6 2.5 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
PFLU_RS06570 +0.6 1.7 glycine zipper 2TM domain-containing protein compare
PFLU_RS23865 +0.6 2.2 pentapeptide repeat-containing protein compare
PFLU_RS21655 +0.6 2.8 response regulator compare
PFLU_RS12715 +0.6 0.8 fumarylacetoacetate hydrolase family protein compare
PFLU_RS18320 +0.6 2.9 hypothetical protein compare
PFLU_RS02220 +0.6 2.5 cell division protein ZapA compare
PFLU_RS20400 +0.6 2.2 hypothetical protein compare
PFLU_RS03400 +0.6 2.0 hypothetical protein compare
PFLU_RS05720 +0.6 4.6 OmpA family protein compare
PFLU_RS29360 +0.6 1.1 cytochrome c5 family protein compare
PFLU_RS14365 +0.6 3.0 hypothetical protein compare
PFLU_RS31010 +0.6 1.0 transposase compare
PFLU_RS26290 +0.6 0.8 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS27805 +0.6 1.7 sarcosine oxidase subunit gamma family protein compare
PFLU_RS11040 +0.6 2.4 hypothetical protein compare
PFLU_RS00210 +0.6 1.1 OsmC family protein compare
PFLU_RS23220 +0.6 1.4 tRNA-Arg compare
PFLU_RS29165 +0.6 1.7 TIGR02444 family protein compare
PFLU_RS12805 +0.6 2.1 RidA family protein compare
PFLU_RS12725 +0.6 1.6 GNAT family N-acetyltransferase compare
PFLU_RS04565 +0.6 0.8 TMEM165/GDT1 family protein compare
PFLU_RS06235 +0.6 2.4 SufE family protein compare
PFLU_RS29555 +0.6 4.4 HDOD domain-containing protein compare
PFLU_RS21820 +0.6 4.4 flagellin compare
PFLU_RS30015 +0.6 4.5 class I SAM-dependent methyltransferase compare
PFLU_RS30610 +0.5 1.8 IS3 family transposase compare
PFLU_RS04570 +0.5 2.1 class I SAM-dependent methyltransferase compare
PFLU_RS25220 +0.5 3.0 ubiquinol oxidase subunit II compare
PFLU_RS20845 +0.5 1.2 hypothetical protein compare
PFLU_RS11415 +0.5 1.5 protein glxC compare
PFLU_RS31510 +0.5 1.2 transcriptional regulator compare
PFLU_RS01515 +0.5 2.7 cellulose synthase operon protein YhjQ compare
PFLU_RS15910 +0.5 0.9 homoprotocatechuate degradation operon regulator HpaR compare
PFLU_RS04165 +0.5 2.6 cell division protein ZapE compare
PFLU_RS08280 +0.5 1.7 hypothetical protein compare
PFLU_RS12780 +0.5 2.7 hypothetical protein compare
PFLU_RS08285 +0.5 2.1 hypothetical protein compare
PFLU_RS24340 +0.5 2.2 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS29065 +0.5 0.8 amino acid ABC transporter ATP-binding protein compare
PFLU_RS11800 +0.5 2.0 LysR family transcriptional regulator compare
PFLU_RS24790 +0.5 2.5 tetratricopeptide repeat protein compare
PFLU_RS21520 +0.5 1.3 thioesterase compare
PFLU_RS31545 +0.5 1.1 LysR family transcriptional regulator compare
PFLU_RS11025 +0.5 1.8 hypothetical protein compare
PFLU_RS14305 +0.5 1.1 sensor histidine kinase compare
PFLU_RS07860 +0.5 2.3 hypothetical protein compare
PFLU_RS29815 +0.5 1.7 aspartate ammonia-lyase compare
PFLU_RS16895 +0.5 1.9 thioesterase compare
PFLU_RS10965 +0.5 2.1 transporter substrate-binding domain-containing protein compare
PFLU_RS29705 +0.5 2.4 rubredoxin compare
PFLU_RS14330 +0.5 2.2 ABC transporter ATP-binding protein compare
PFLU_RS17920 +0.5 0.7 acyltransferase compare
PFLU_RS31310 +0.5 1.0 phage tail protein compare
PFLU_RS29770 +0.5 3.9 phosphate ABC transporter substrate-binding protein PstS compare
PFLU_RS10090 +0.5 1.1 redox-sensitive transcriptional activator SoxR compare
PFLU_RS21670 +0.5 3.4 flagellar biosynthesis protein FlhF compare
PFLU_RS22040 +0.5 2.8 NlpC/P60 family protein compare
PFLU_RS12235 +0.5 3.0 hypothetical protein compare
PFLU_RS19550 +0.5 0.7 ABC transporter ATP-binding protein compare
PFLU_RS16520 +0.5 1.9 hypothetical protein compare
PFLU_RS21765 +0.5 2.6 flagellar assembly protein FliH compare
PFLU_RS13895 +0.5 0.9 helix-turn-helix transcriptional regulator compare
PFLU_RS10290 +0.5 2.2 glucose 1-dehydrogenase compare
PFLU_RS01315 +0.5 1.2 Hsp33 family molecular chaperone HslO compare
PFLU_RS19720 +0.5 1.2 hypothetical protein compare
PFLU_RS25955 +0.5 0.9 hypothetical protein compare
PFLU_RS18000 +0.5 0.7 AhpC/TSA family protein compare
PFLU_RS27300 +0.5 3.9 peptidoglycan DD-metalloendopeptidase family protein compare
PFLU_RS13560 +0.5 2.3 TSUP family transporter compare
PFLU_RS13975 +0.5 1.4 hypothetical protein compare
PFLU_RS11395 +0.5 2.8 formyltetrahydrofolate deformylase compare
PFLU_RS08485 +0.5 1.3 crotonase/enoyl-CoA hydratase family protein compare
PFLU_RS30445 +0.5 2.1 hypothetical protein compare
PFLU_RS08420 +0.5 2.1 hypothetical protein compare
PFLU_RS31470 +0.5 2.0 hypothetical protein compare
PFLU_RS05985 +0.5 2.3 ABC transporter permease compare
PFLU_RS15945 +0.5 2.4 MFS transporter compare
PFLU_RS20705 +0.5 1.9 hypothetical protein compare
PFLU_RS23045 +0.5 2.3 beta-ketoacyl-ACP synthase II compare
PFLU_RS00430 +0.5 3.7 N-acetylmuramoyl-L-alanine amidase compare
PFLU_RS07045 +0.5 1.7 addiction module toxin, HicA family compare
PFLU_RS14970 +0.5 1.6 alpha/beta hydrolase compare
PFLU_RS23330 +0.5 2.1 ATP-binding cassette domain-containing protein compare
PFLU_RS08760 +0.5 1.4 phosphonate C-P lyase system protein PhnG compare
PFLU_RS14045 +0.5 1.5 hypothetical protein compare
PFLU_RS07630 +0.4 3.8 transglycosylase SLT domain-containing protein compare
PFLU_RS27910 +0.4 1.0 helix-turn-helix transcriptional regulator compare
PFLU_RS28415 +0.4 2.8 tRNA (guanosine(46)-N7)-methyltransferase TrmB compare
PFLU_RS29380 +0.4 3.1 D-amino acid dehydrogenase compare
PFLU_RS20445 +0.4 1.9 hypothetical protein compare
PFLU_RS16955 +0.4 2.5 hypothetical protein compare
PFLU_RS15985 +0.4 1.7 SDR family oxidoreductase compare
PFLU_RS02790 +0.4 1.0 TetR family transcriptional regulator compare
PFLU_RS18440 +0.4 2.2 NAD(P)H:quinone oxidoreductase compare
PFLU_RS29385 +0.4 3.7 AsnC family transcriptional regulator compare
PFLU_RS24175 +0.4 2.2 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
PFLU_RS08875 +0.4 1.5 heme-binding protein compare
PFLU_RS07780 +0.4 1.0 hypothetical protein compare
PFLU_RS12845 +0.4 2.1 GntP family permease compare
PFLU_RS01660 +0.4 0.8 rhodanese-like domain-containing protein compare
PFLU_RS12395 +0.4 1.2 zinc ribbon domain-containing protein compare
PFLU_RS11645 +0.4 1.9 SMP-30/gluconolactonase/LRE family protein compare
PFLU_RS28470 +0.4 1.9 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
PFLU_RS16250 +0.4 1.6 hypothetical protein compare
PFLU_RS14070 +0.4 2.2 NlpC/P60 family protein compare
PFLU_RS20765 +0.4 0.6 hypothetical protein compare
PFLU_RS24100 +0.4 3.3 YebC/PmpR family DNA-binding transcriptional regulator compare
PFLU_RS17710 +0.4 2.6 DUF4880 domain-containing protein compare
PFLU_RS23445 +0.4 1.3 DUF1003 domain-containing protein compare
PFLU_RS28895 +0.4 1.0 DUF2388 domain-containing protein compare
PFLU_RS21770 +0.4 2.7 flagellar motor switch protein FliG compare
PFLU_RS07655 +0.4 2.1 acetyl-CoA C-acyltransferase FadA compare
PFLU_RS29255 +0.4 1.4 iron donor protein CyaY compare
PFLU_RS21215 +0.4 0.6 YheU family protein compare
PFLU_RS20095 +0.4 1.8 glyoxalase compare
PFLU_RS24605 +0.4 1.7 formate-dependent phosphoribosylglycinamide formyltransferase compare
PFLU_RS23855 +0.4 1.5 aminoacyl-tRNA hydrolase compare
PFLU_RS26335 +0.4 2.4 heme-binding protein compare
PFLU_RS18255 +0.4 2.6 carbohydrate ABC transporter permease compare
PFLU_RS30355 +0.4 2.0 hypothetical protein compare
PFLU_RS21790 +0.4 2.6 PAS domain-containing protein compare
PFLU_RS13150 +0.4 1.5 hypothetical protein compare
PFLU_RS02575 +0.4 3.0 GTPase HflX compare


Specific Phenotypes

For 1 genes in this experiment

For temperature shift D-Glucose in Pseudomonas fluorescens SBW25-INTG

For temperature shift D-Glucose across organisms