Experiment set4IT069 for Methanococcus maripaludis S2

Compare to:

Formate deepwell casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01370 +2.6 21.5 acetate--CoA ligase family protein compare
MMP_RS03215 +1.5 11.7 MBL fold metallo-hydrolase compare
MMP_RS07115 +1.4 10.3 MBL fold metallo-hydrolase compare
MMP_RS01960 +0.9 1.3 hypothetical protein compare
MMP_RS07860 +0.9 1.2 hypothetical protein compare
MMP_RS03385 +0.8 1.7 cation diffusion facilitator family transporter compare
MMP_RS02310 +0.7 2.3 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08315 +0.7 1.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS01775 +0.6 2.1 TIGR00297 family protein compare
MMP_RS02675 +0.6 1.4 hypothetical protein compare
MMP_RS01880 +0.6 3.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01875 +0.6 3.7 N-acetyltransferase compare
MMP_RS07125 +0.6 2.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01525 +0.6 1.9 nucleoside-diphosphate kinase compare
MMP_RS03390 +0.5 3.2 malate dehydrogenase compare
MMP_RS03300 +0.5 1.0 TOBE domain-containing protein compare
MMP_RS06555 +0.5 2.7 cupin domain-containing protein compare
MMP_RS01420 +0.5 1.8 hypothetical protein compare
MMP_RS05535 +0.5 2.4 hypothetical protein compare
MMP_RS07415 +0.5 3.8 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS09055 +0.5 0.9 CAP domain-containing protein compare
MMP_RS08595 +0.5 1.0 flagellar protein C compare
MMP_RS01570 +0.5 1.4 hypothetical protein compare
MMP_RS08660 +0.5 2.1 DHH family phosphoesterase compare
MMP_RS06575 +0.5 2.4 fluoride efflux transporter CrcB compare
MMP_RS07805 +0.5 3.0 ABC transporter permease compare
MMP_RS07095 +0.4 1.3 PspC domain-containing protein compare
MMP_RS03320 +0.4 1.7 metal-dependent transcriptional regulator compare
MMP_RS07355 +0.4 0.8 transcription factor S compare
MMP_RS04480 +0.4 3.7 lysine 2 3-aminomutase compare
MMP_RS08275 +0.4 3.5 hypothetical protein compare
MMP_RS06600 +0.4 0.8 class III signal peptide-containing protein compare
MMP_RS03340 +0.4 0.7 ABC transporter ATP-binding protein compare
MMP_RS08455 +0.4 2.5 multiprotein bridging factor aMBF1 compare
MMP_RS06335 +0.4 2.5 HAD family hydrolase compare
MMP_RS06485 +0.4 0.8 zinc ribbon domain-containing protein compare
MMP_RS08280 +0.4 1.9 proteasome assembly chaperone family protein compare
MMP_RS03245 +0.4 2.4 DNA repair and recombination protein RadB compare
MMP_RS07725 +0.4 1.6 4Fe-4S dicluster domain-containing protein compare
MMP_RS07615 +0.4 2.0 energy-coupling factor ABC transporter permease compare
MMP_RS05355 +0.4 0.6 hypothetical protein compare
MMP_RS06670 +0.4 1.3 glucose-6-phosphate isomerase compare
MMP_RS05985 +0.4 1.4 hypothetical protein compare
MMP_RS07085 +0.3 2.3 ribonuclease HII compare
MMP_RS01965 +0.3 2.1 DUF1616 domain-containing protein compare
MMP_RS02230 +0.3 2.3 sodium-dependent transporter compare
MMP_RS07850 +0.3 1.5 prephenate dehydratase compare
MMP_RS07120 +0.3 2.8 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS08670 +0.3 1.9 metallophosphoesterase compare
MMP_RS09025 +0.3 0.7 hypothetical protein compare
MMP_RS01100 +0.3 0.7 ABC transporter ATP-binding protein compare
MMP_RS01885 +0.3 1.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS08350 +0.3 0.6 hypothetical protein compare
MMP_RS06515 +0.3 1.1 UPF0489 family protein compare
MMP_RS03755 +0.3 2.4 MarR family transcriptional regulator compare
MMP_RS01540 +0.3 1.2 DUF504 domain-containing protein compare
MMP_RS04520 +0.3 1.8 nucleoside deaminase compare
MMP_RS04730 +0.3 2.5 flavodoxin family protein compare
MMP_RS00915 +0.3 1.8 DUF116 domain-containing protein compare
MMP_RS08580 +0.3 1.7 flagellin compare
MMP_RS06535 +0.3 1.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS06770 +0.3 2.2 DHH family phosphoesterase compare
MMP_RS02605 +0.3 0.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS06490 +0.3 1.8 hypothetical protein compare
MMP_RS04485 +0.3 2.1 putative beta-lysine N-acetyltransferase compare
MMP_RS02315 +0.3 1.8 RimK family alpha-L-glutamate ligase compare
MMP_RS05660 +0.3 1.7 phosphate ABC transporter substrate-binding protein compare
MMP_RS01970 +0.3 2.0 TIGR04279 domain-containing protein compare
MMP_RS06435 +0.3 1.5 CBS domain-containing protein compare
MMP_RS06765 +0.3 1.7 flap endonuclease-1 compare
MMP_RS06545 +0.3 1.4 ferredoxin family protein compare
MMP_RS04150 +0.2 1.9 MFS transporter compare
MMP_RS03465 +0.2 0.6 adenine phosphoribosyltransferase compare
MMP_RS04720 +0.2 0.9 DedA family protein compare
MMP_RS08215 +0.2 1.1 DUF483 domain-containing protein compare
MMP_RS01785 +0.2 1.6 hypothetical protein compare
MMP_RS03740 +0.2 1.9 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00520 +0.2 0.7 RNA polymerase Rpb4 family protein compare
MMP_RS07560 +0.2 1.2 prefoldin subunit alpha compare
MMP_RS06910 +0.2 1.8 RlmF-related methyltransferase compare
MMP_RS03150 +0.2 1.7 phosphoglycerate mutase compare
MMP_RS05665 +0.2 0.9 phosphate ABC transporter permease subunit PstC compare
MMP_RS05990 +0.2 0.9 DsrE family protein compare
MMP_RS07135 +0.2 1.5 coenzyme F420 hydrogenase subunit beta compare
MMP_RS07835 +0.2 1.4 TldD/PmbA family protein compare
MMP_RS06290 +0.2 1.1 DNA repair and recombination protein RadA compare
MMP_RS06155 +0.2 0.9 DUF4186 domain-containing protein compare
MMP_RS05980 +0.2 1.6 ferritin compare
MMP_RS05175 +0.2 1.3 hypothetical protein compare
MMP_RS07150 +0.2 1.5 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS05415 +0.2 0.6 DUF22 domain-containing protein compare
MMP_RS01890 +0.2 0.9 nucleotide sugar dehydrogenase compare
MMP_RS00145 +0.2 1.5 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS05180 +0.2 1.9 Nre family DNA repair protein compare
MMP_RS03330 +0.2 1.6 rubrerythrin family protein compare
MMP_RS06570 +0.2 0.9 DUF190 domain-containing protein compare
MMP_RS02790 +0.2 0.5 class III signal peptide-containing protein compare
MMP_RS05830 +0.2 1.3 peptidyl-prolyl cis-trans isomerase compare
MMP_RS00910 +0.2 1.3 2-phosphosulfolactate phosphatase compare
MMP_RS07910 +0.2 1.3 NAD(P)H-hydrate dehydratase compare
MMP_RS02770 +0.2 0.9 hypothetical protein compare
MMP_RS01940 +0.2 0.8 MoxR family ATPase compare
MMP_RS02290 +0.2 1.6 MBL fold metallo-hydrolase compare
MMP_RS05820 +0.2 1.5 RNA-binding transcriptional accessory protein compare
MMP_RS01580 +0.2 1.4 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS08700 +0.2 1.3 hypothetical protein compare
MMP_RS00140 +0.2 1.2 DUF192 domain-containing protein compare
MMP_RS00080 +0.2 0.6 RecB-family nuclease compare
MMP_RS01900 +0.2 1.5 hypothetical protein compare
MMP_RS06745 +0.2 1.3 DUF2119 domain-containing protein compare
MMP_RS00060 +0.2 0.4 3-dehydroquinate synthase II compare
MMP_RS08400 +0.2 0.6 MJ0307 family thioredoxin compare
MMP_RS04105 +0.2 0.9 MarR family transcriptional regulator compare
MMP_RS07895 +0.2 0.8 cytochrome c compare
MMP_RS06445 +0.2 1.1 DUF89 domain-containing protein compare
MMP_RS06550 +0.2 1.3 AMP-binding protein compare
MMP_RS07130 +0.2 1.2 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS05995 +0.2 1.5 FprA family A-type flavoprotein compare
MMP_RS08980 +0.2 1.1 hypothetical protein compare
MMP_RS03765 +0.2 1.2 CopG family ribbon-helix-helix protein compare
MMP_RS06875 +0.2 1.1 FAD-dependent oxidoreductase compare
MMP_RS06540 +0.2 0.6 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS07925 +0.2 1.0 haloacid dehalogenase compare
MMP_RS03535 +0.2 0.6 helix-turn-helix transcriptional regulator compare
MMP_RS00540 +0.2 1.3 PLP-dependent aminotransferase family protein compare
MMP_RS08615 +0.2 0.6 flagellar protein G compare
MMP_RS03890 +0.2 1.0 DUF2540 domain-containing protein compare
MMP_RS03350 +0.2 1.2 winged helix-turn-helix domain-containing protein compare
MMP_RS06940 +0.2 0.6 polyprenyl diphosphate synthase compare
MMP_RS00760 +0.2 1.2 branched-chain-amino-acid transaminase compare
MMP_RS08485 +0.2 1.3 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08085 +0.2 1.4 hypothetical protein compare
MMP_RS06860 +0.2 0.6 4Fe-4S binding protein compare
MMP_RS08775 +0.2 0.9 methanogenesis marker 9 domain-containing protein compare
MMP_RS03615 +0.2 1.3 4Fe-4S binding protein compare
MMP_RS00240 +0.2 1.5 type II secretion system F family protein compare
MMP_RS05970 +0.2 0.8 class II SORL domain-containing protein compare
MMP_RS05900 +0.2 1.4 tetratricopeptide repeat protein compare
MMP_RS05700 +0.2 1.3 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS02245 +0.2 0.7 hypothetical protein compare
MMP_RS05695 +0.2 1.3 phospholipase D-like domain-containing protein compare
MMP_RS00930 +0.2 1.3 ABC transporter permease compare
MMP_RS05250 +0.2 0.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08500 +0.2 1.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS04985 +0.2 0.8 DUF2180 family protein compare
MMP_RS03870 +0.2 0.9 purine NTPase compare
MMP_RS08620 +0.2 1.0 flagellar accessory protein FlaH compare
MMP_RS00660 +0.2 1.2 alkaline phosphatase family protein compare
MMP_RS01950 +0.2 1.1 hypothetical protein compare
MMP_RS01125 +0.2 1.1 thioredoxin family protein compare
MMP_RS01550 +0.2 1.2 DUF1624 domain-containing protein compare
MMP_RS01515 +0.2 1.1 PINc/VapC family ATPase compare
MMP_RS00530 +0.2 1.0 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS09010 +0.2 1.3 hypothetical protein compare
MMP_RS07855 +0.2 1.0 class I SAM-dependent methyltransferase compare
MMP_RS06655 +0.2 1.1 glycoside hydrolase family 15 protein compare
MMP_RS02475 +0.1 0.4 hypothetical protein compare
MMP_RS00325 +0.1 0.3 RNA-binding protein compare
MMP_RS00865 +0.1 0.8 SLC13 family permease compare
MMP_RS08310 +0.1 0.5 TMEM165/GDT1 family protein compare
MMP_RS03020 +0.1 0.7 peptidylprolyl isomerase compare
MMP_RS04305 +0.1 0.6 hypothetical protein compare
MMP_RS06190 +0.1 0.8 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS07820 +0.1 0.6 UPF0104 family protein compare
MMP_RS01435 +0.1 0.7 DMT family transporter compare
MMP_RS05715 +0.1 1.0 hypothetical protein compare
MMP_RS06275 +0.1 1.1 ATP-dependent DNA helicase compare
MMP_RS02955 +0.1 0.8 DJ-1/PfpI family protein compare
MMP_RS07140 +0.1 1.2 TIGR00341 family protein compare
MMP_RS01620 +0.1 0.6 hypothetical protein compare
MMP_RS06140 +0.1 0.6 radical SAM protein compare
MMP_RS06650 +0.1 1.0 glycoside hydrolase family 57 protein compare
MMP_RS04530 +0.1 1.2 ABC transporter permease compare
MMP_RS02085 +0.1 0.8 inosine/xanthosine triphosphatase compare
MMP_RS02520 +0.1 1.1 hypothetical protein compare
MMP_RS02495 +0.1 0.6 hypothetical protein compare
MMP_RS01055 +0.1 0.8 hypothetical protein compare
MMP_RS01275 +0.1 0.8 class III signal peptide-containing protein compare
MMP_RS02365 +0.1 1.1 nitrogen fixation compare
MMP_RS06060 +0.1 0.8 hypothetical protein compare
MMP_RS01110 +0.1 0.7 FmdE family protein compare
MMP_RS00655 +0.1 0.6 hypothetical protein compare
MMP_RS01975 +0.1 1.2 hypothetical protein compare
MMP_RS08230 +0.1 0.8 50S ribosomal protein L11 methyltransferase compare
MMP_RS02255 +0.1 0.7 hypothetical protein compare
MMP_RS08675 +0.1 0.7 class III signal peptide-containing protein compare
MMP_RS04265 +0.1 0.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03735 +0.1 1.1 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS00630 +0.1 0.9 ECF transporter S component compare
MMP_RS03860 +0.1 1.0 hypothetical protein compare
MMP_RS07435 +0.1 0.4 GMP synthase subunit A compare
MMP_RS07590 +0.1 1.0 hypothetical protein compare
MMP_RS08835 +0.1 0.9 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS02960 +0.1 0.8 class I SAM-dependent methyltransferase family protein compare
MMP_RS05295 +0.1 1.0 minichromosome maintenance protein MCM compare
MMP_RS07815 +0.1 0.3 DUF2120 domain-containing protein compare
MMP_RS02490 +0.1 0.8 hypothetical protein compare
MMP_RS03885 +0.1 1.1 tyrosine-type recombinase/integrase compare
MMP_RS04165 +0.1 0.9 TetR/AcrR family transcriptional regulator compare
MMP_RS03660 +0.1 1.0 MATE family efflux transporter compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments

For nutrient t2 Sodium acetate across organisms