Experiment set4IT062 for Pseudomonas fluorescens FW300-N2E3

200 most important genes:

gene	name	fitness	t score	description
AO353_22685		-3.7	-2.6	peroxidase
AO353_03580		-2.5	-4.1	ATP-dependent DNA helicase RuvB
AO353_13925		-2.3	-4.0	XRE family transcriptional regulator
AO353_08165		-2.2	-3.5	pyrroline-5-carboxylate reductase
AO353_07355		-2.1	-6.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
AO353_00825		-2.1	-5.2	porin
AO353_10670		-1.9	-8.2	shikimate dehydrogenase
AO353_11165		-1.9	-10.3	hypothetical protein
AO353_13100		-1.9	-2.6	GTPase RsgA
AO353_16805		-1.8	-6.6	recombinase RecA
AO353_10930		-1.8	-7.9	DNA polymerase I
AO353_04355		-1.7	-2.3	homoserine dehydrogenase
AO353_12115		-1.6	-2.9	2,3-bisphosphoglycerate-independent phosphoglycerate mutase
AO353_03590		-1.6	-3.9	crossover junction endodeoxyribonuclease RuvC
AO353_02250		-1.6	-3.1	chorismate synthase
AO353_09000		-1.5	-5.4	argininosuccinate lyase
AO353_08685		-1.5	-7.2	N-acetylglutamate synthase
AO353_04175		-1.5	-4.9	glycerol uptake facilitator GlpF
AO353_07155		-1.5	-5.8	N-acetyl-gamma-glutamyl-phosphate reductase
AO353_14495		-1.5	-8.6	acetolactate synthase 3 catalytic subunit
AO353_06050		-1.4	-5.3	exodeoxyribonuclease V subunit gamma
AO353_14220		-1.4	-1.7	ribosomal large subunit pseudouridine synthase D
AO353_09050		-1.4	-3.9	recombinase XerC
AO353_04520		-1.4	-5.1	elongation factor 4
AO353_07075		-1.4	-5.1	elongation factor Tu
AO353_16940		-1.4	-5.3	deoxycytidine triphosphate deaminase
AO353_21640		-1.4	-2.5	cobalt transporter
AO353_03710		-1.4	-2.3	formyltetrahydrofolate deformylase
AO353_21625		-1.4	-2.6	Fe/S biogenesis protein NfuA
AO353_07315		-1.4	-2.6	rRNA methyltransferase
AO353_12665		-1.3	-3.2	glycosyl transferase
AO353_00515		-1.3	-3.3	hypothetical protein
AO353_11730		-1.3	-7.4	glutamate--cysteine ligase
AO353_18540		-1.3	-2.6	pseudouridine synthase
AO353_03795		-1.3	-4.1	fumarate hydratase
AO353_12500		-1.3	-2.0	shikimate kinase
AO353_20175		-1.3	-3.3	ATP-dependent Clp protease proteolytic subunit
AO353_03615		-1.3	-3.3	cold-shock protein
AO353_13140		-1.2	-4.9	tRNA dimethylallyltransferase
AO353_06045		-1.2	-5.6	exodeoxyribonuclease V subunit beta
AO353_14485		-1.2	-2.1	pseudouridine synthase
AO353_09240		-1.2	-2.6	acetylglutamate kinase
AO353_16530		-1.2	-2.0	ribonuclease HII
AO353_09785		-1.2	-2.2	hypothetical protein
AO353_09320		-1.2	-7.0	ATP-dependent DNA helicase RecG
AO353_09040		-1.2	-1.6	diaminopimelate epimerase
AO353_04190		-1.2	-1.7	glycerol-3-phosphate dehydrogenase
AO353_00185		-1.1	-2.3	phage tail protein
AO353_12105		-1.1	-5.3	peptidase S41
AO353_04565		-1.1	-4.7	nucleoid-associated protein
AO353_20565		-1.1	-2.0	tRNA-Ala
AO353_00660		-1.1	-2.6	transcriptional regulator
AO353_09440		-1.1	-1.8	type VI secretion protein
AO353_08880		-1.1	-2.1	exopolyphosphatase
AO353_28425		-1.1	-2.8	TetR family transcriptional regulator
AO353_10510		-1.0	-1.8	benzoate transporter
AO353_03670		-1.0	-3.6	ornithine acetyltransferase
AO353_19360		-1.0	-2.2	peroxiredoxin
AO353_27650		-1.0	-3.2	cell division protein FtsK
AO353_14740		-1.0	-2.5	GTP-binding protein
AO353_10055		-1.0	-7.0	DNA helicase II
AO353_16710		-1.0	-1.9	hypothetical protein
AO353_08110		-1.0	-4.3	glutathione synthetase
AO353_20170		-1.0	-3.7	trigger factor
AO353_11770		-1.0	-1.7	molecular chaperone Hsp33
AO353_14115		-0.9	-4.6	gamma-glutamyl kinase
AO353_09315		-0.9	-5.5	LysR family transcriptional regulator
AO353_02070		-0.9	-4.5	prephenate dehydratase
AO353_20185		-0.9	-4.1	DNA-binding protein
AO353_15875		-0.9	-3.3	23S rRNA (adenine(2503)-C2)-methyltransferase
AO353_07850		-0.9	-2.4	ATP-dependent RNA helicase
AO353_15185		-0.9	-3.7	ATPase
AO353_08980		-0.9	-2.1	heme biosynthesis operon protein HemX
AO353_14400		-0.9	-3.1	Fis family transcriptional regulator
AO353_03360		-0.9	-4.8	glucose-6-phosphate dehydrogenase
AO353_16810		-0.9	-2.7	recombinase RecX
AO353_09890		-0.9	-3.3	phosphate ABC transporter ATP-binding protein
AO353_15445		-0.9	-2.5	disulfide bond formation protein B
AO353_02595		-0.9	-2.3	cobalamin synthase
AO353_05550		-0.9	-4.1	pseudouridine synthase
AO353_14775		-0.9	-3.8	hypothetical protein
AO353_19565		-0.9	-2.9	vanillate O-demethylase oxidoreductase VanB
AO353_13225		-0.9	-2.1	50S ribosomal protein L9
AO353_09900		-0.9	-6.1	phosphate ABC transporter permease
AO353_10730		-0.9	-1.0	hypothetical protein
AO353_08115		-0.9	-3.8	energy transducer TonB
AO353_11750		-0.9	-2.0	ATPase
AO353_23720		-0.9	-2.6	BatB protein
AO353_27575		-0.8	-2.1	hypothetical protein
AO353_14940		-0.8	-2.7	malate:quinone oxidoreductase
AO353_09945		-0.8	-2.8	LysR family transcriptional regulator
AO353_24130		-0.8	-1.6	hypothetical protein
AO353_18305		-0.8	-3.0	RNA helicase
AO353_12935		-0.8	-2.5	glycosyltransferase
AO353_03585		-0.8	-1.4	ATP-dependent DNA helicase RuvA
AO353_06850		-0.8	-3.1	MFS transporter
AO353_06480		-0.8	-2.0	50S rRNA methyltransferase
AO353_10455		-0.8	-1.2	tRNA modification GTPase MnmE
AO353_05625		-0.8	-0.8	transcription elongation factor GreA
AO353_17165		-0.8	-2.0	ATP-dependent helicase
AO353_22920		-0.8	-3.0	GntR family transcriptional regulator
AO353_28930		-0.8	-1.9	hypothetical protein
AO353_25845		-0.8	-1.7	GNAT family acetyltransferase
AO353_17885		-0.8	-1.5	hypothetical protein
AO353_00760		-0.8	-1.9	hypothetical protein
AO353_09660		-0.8	-1.8	hypothetical protein
AO353_04365		-0.8	-3.2	recombinase XerD
AO353_09905		-0.8	-4.7	phosphate-binding protein
AO353_11775		-0.8	-4.3	phosphoenolpyruvate carboxykinase [ATP]
AO353_12420		-0.8	-2.2	predicted FeS cluster maintenance protein (from data)
AO353_01190		-0.7	-1.5	hypothetical protein
AO353_28815		-0.7	-1.8	hypothetical protein
AO353_28110		-0.7	-2.8	TetR family transcriptional regulator
AO353_26935		-0.7	-1.9	LysR family transcriptional regulator
AO353_00495		-0.7	-1.4	DNA topoisomerase I
AO353_24605		-0.7	-1.5	hypothetical protein
AO353_18500		-0.7	-1.2	chemotaxis protein CheY
AO353_27155		-0.7	-1.8	hypothetical protein
AO353_14500		-0.7	-3.6	acetolactate synthase 3 regulatory subunit
AO353_02005		-0.7	-1.2	hypothetical protein
AO353_26835		-0.7	-2.2	transcriptional regulator
AO353_17460		-0.7	-2.7	hypothetical protein
AO353_10440		-0.7	-2.9	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
AO353_24885		-0.7	-2.6	Crp/Fnr family transcriptional regulator
AO353_15250		-0.7	-1.9	cytochrome B
AO353_12915		-0.7	-3.9	carbamoyltransferase
AO353_27720		-0.7	-2.5	cupin
AO353_13200		-0.7	-4.9	exoribonuclease R
AO353_04650		-0.7	-1.4	molybdenum cofactor biosynthesis protein MoaE
AO353_18890		-0.7	-2.7	cytochrome C
AO353_19085		-0.7	-1.2	organic hydroperoxide resistance protein
AO353_21425		-0.7	-2.0	hypothetical protein
AO353_23375		-0.7	-3.4	Valyl-tRNA synthetase
AO353_27695		-0.7	-3.7	isocitrate dehydrogenase
AO353_00835		-0.7	-3.1	transporter
AO353_01355		-0.7	-4.0	3-oxoacyl-ACP synthase
AO353_02600		-0.7	-1.9	alpha-ribazole phosphatase
AO353_26865		-0.7	-2.0	transcriptional regulator
AO353_05690		-0.7	-2.1	SsrA-binding protein
AO353_18425		-0.7	-2.4	hypothetical protein
AO353_27950		-0.7	-1.0	hypothetical protein
AO353_27380		-0.7	-0.9	pyocin R2, holin
AO353_08440		-0.7	-2.3	hypothetical protein
AO353_12090		-0.7	-1.2	imidazole glycerol phosphate synthase subunit HisF
AO353_04500		-0.7	-1.3	DNA repair protein RecO
AO353_04325		-0.7	-1.2	hypothetical protein
AO353_22105		-0.6	-2.7	nitrate reductase
AO353_14395		-0.6	-2.4	poly(A) polymerase
AO353_07610		-0.6	-1.1	hypothetical protein
AO353_16300		-0.6	-2.2	hypothetical protein
AO353_07325		-0.6	-1.0	diadenosine tetraphosphatase
AO353_26390		-0.6	-1.5	glyoxalase
AO353_10430		-0.6	-1.9	chromosome partitioning protein ParB
AO353_06725		-0.6	-1.4	hypothetical protein
AO353_09745		-0.6	-0.9	hypothetical protein
AO353_02970		-0.6	-1.8	carbon storage regulator
AO353_28310		-0.6	-1.9	deaminase
AO353_21445		-0.6	-1.4	cation:proton antiporter
AO353_27180		-0.6	-1.9	peptidase M48, Ste24p
AO353_17175		-0.6	-1.7	beta-ketoadipyl CoA thiolase
AO353_16645		-0.6	-2.0	hypothetical protein
AO353_27710		-0.6	-1.3	DNA repair protein
AO353_25015		-0.6	-1.6	polyketide cyclase
AO353_22955		-0.6	-1.7	tRNA hydroxylase
AO353_19310		-0.6	-0.9	enoyl-CoA hydratase
AO353_10885		-0.6	-3.0	metal ABC transporter permease
AO353_07105		-0.6	-1.0	biotin--protein ligase
AO353_18780		-0.6	-3.0	cobyrinic acid a,c-diamide synthase
AO353_16835		-0.6	-1.4	LuxR family transcriptional regulator
AO353_25640		-0.6	-1.6	AsnC family transcriptional regulator
AO353_27350		-0.6	-1.7	hypothetical protein
AO353_02620		-0.6	-2.8	threonine-phosphate decarboxylase
AO353_26245		-0.6	-2.8	phage head morphogenesis protein
AO353_18745		-0.6	-1.3	flagellar biosynthesis protein flip
AO353_14420		-0.6	-2.1	molecular chaperone DnaK
AO353_27130		-0.6	-1.2	hypothetical protein
AO353_09885		-0.6	-1.4	transcriptional regulator PhoU
AO353_03420		-0.6	-2.1	phosphogluconate dehydratase
AO353_01690		-0.6	-3.0	hypothetical protein
AO353_15555		-0.6	-2.2	fumarylacetoacetase
AO353_19640		-0.6	-2.9	chemotaxis protein CheY
AO353_05240		-0.6	-1.5	rod shape-determining protein MreD
AO353_22280		-0.6	-1.3	hypothetical protein
AO353_01685		-0.6	-0.8	hypothetical protein
AO353_20810		-0.6	-1.5	hypothetical protein
AO353_21830		-0.6	-4.5	chemotaxis protein CheY
AO353_12930		-0.6	-1.8	GlcNAc-PI de-N-acetylase
AO353_26190		-0.6	-2.0	hypothetical protein
AO353_19090		-0.6	-0.9	MarR family transcriptional regulator
AO353_25160		-0.6	-1.9	ABC transporter substrate-binding protein
AO353_23615		-0.6	-2.6	peptidase S54
AO353_27925		-0.6	-1.3	hypothetical protein
AO353_15460		-0.6	-3.0	cytochrome o ubiquinol oxidase subunit III
AO353_08015		-0.6	-3.0	5,10-methylenetetrahydrofolate reductase
AO353_08910		-0.6	-0.9	hypothetical protein
AO353_10560		-0.6	-2.0	hypothetical protein
AO353_01975		-0.6	-3.0	glycosyl transferase
AO353_03520		-0.5	-1.6	hypothetical protein
AO353_16795		-0.5	-1.7	lysozyme
AO353_08975		-0.5	-2.6	heme biosynthesis protein HemY

Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens FW300-N2E3 in lb experiments