Experiment set4IT062 for Methanococcus maripaludis S2

Compare to:

Formate McCas deepwell complete

200 most important genes:

  gene name fitness t score description  
MMP_RS07005 -4.9 -1.7 4Fe-4S binding protein compare
MMP_RS06700 -3.8 -16.9 hypothetical protein compare
MMP_RS06680 -3.7 -16.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06685 -3.6 -16.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS06345 -3.6 -15.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS00695 -3.3 -2.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02280 -3.3 -2.3 DUF211 domain-containing protein compare
MMP_RS05515 -3.1 -11.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06355 -3.0 -5.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08720 -3.0 -3.1 4Fe-4S binding protein compare
MMP_RS06715 -3.0 -18.6 cache domain-containing protein compare
MMP_RS07635 -3.0 -11.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03015 -2.9 -17.4 GTP 3' 8-cyclase MoaA compare
MMP_RS06720 -2.9 -12.1 response regulator transcription factor compare
MMP_RS08460 -2.9 -3.5 proteasome-activating nucleotidase compare
MMP_RS06350 -2.9 -10.1 HesA/MoeB/ThiF family protein compare
MMP_RS01755 -2.8 -2.5 DUF2097 domain-containing protein compare
MMP_RS06730 -2.8 -5.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS01005 -2.8 -3.4 riboflavin synthase compare
MMP_RS06705 -2.7 -11.0 formate/nitrite transporter family protein compare
MMP_RS01175 -2.7 -4.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02900 -2.6 -1.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS00300 -2.5 -1.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07380 -2.5 -3.4 transcription elongation factor Spt5 compare
MMP_RS01020 -2.5 -2.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08715 -2.4 -2.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07445 -2.4 -8.6 helix-turn-helix domain-containing protein compare
MMP_RS04605 -2.4 -7.9 cobalt ECF transporter T component CbiQ compare
MMP_RS04615 -2.4 -6.7 PDGLE domain-containing protein compare
MMP_RS02195 -2.3 -7.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS05920 -2.3 -1.5 50S ribosomal protein L37e compare
MMP_RS00305 -2.3 -3.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS04890 -2.3 -2.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08745 -2.3 -10.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04585 -2.2 -12.2 AIR synthase related protein compare
MMP_RS08820 -2.2 -7.5 hypothetical protein compare
MMP_RS00895 -2.2 -8.0 hypothetical protein compare
MMP_RS04780 -2.1 -4.0 ribonuclease P compare
MMP_RS02135 -2.1 -5.7 DUF5612 domain-containing protein compare
MMP_RS06625 -2.1 -3.0 DNA primase compare
MMP_RS01225 -2.1 -9.6 DUF5379 domain-containing protein compare
MMP_RS06630 -2.0 -2.7 UPF0058 family protein compare
MMP_RS06285 -2.0 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04685 -2.0 -5.0 DUF126 domain-containing protein compare
MMP_RS00685 -1.9 -5.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01500 -1.9 -4.2 CBS domain-containing protein compare
MMP_RS06370 -1.9 -8.0 biotin synthase BioB compare
MMP_RS07545 -1.9 -2.5 HTH domain-containing protein compare
MMP_RS03640 -1.9 -7.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06895 -1.9 -2.9 selenocysteine-specific translation elongation factor compare
MMP_RS07845 -1.8 -6.5 LL-diaminopimelate aminotransferase compare
MMP_RS08645 -1.8 -9.6 UPF0179 family protein compare
MMP_RS08635 -1.8 -4.1 UbiA family prenyltransferase compare
MMP_RS03205 -1.8 -3.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01325 -1.8 -4.9 dihydroneopterin aldolase family protein compare
MMP_RS06270 -1.7 -6.6 TIGR00300 family protein compare
MMP_RS06400 -1.7 -3.6 4Fe-4S binding protein compare
MMP_RS03600 -1.7 -3.4 triose-phosphate isomerase compare
MMP_RS06475 -1.7 -6.4 FAD-dependent oxidoreductase compare
MMP_RS08210 -1.7 -3.0 phosphatidylglycerophosphatase A compare
MMP_RS08650 -1.7 -5.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03315 -1.7 -2.2 ferrous iron transport protein A compare
MMP_RS03035 -1.7 -5.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01220 -1.7 -8.9 hypothetical protein compare
MMP_RS04500 -1.7 -12.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08790 -1.7 -3.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS01610 -1.7 -4.4 hypothetical protein compare
MMP_RS08095 -1.7 -9.1 dethiobiotin synthase compare
MMP_RS01700 -1.7 -2.1 dihydroxy-acid dehydratase compare
MMP_RS03025 -1.7 -6.0 molybdenum cofactor guanylyltransferase compare
MMP_RS07735 -1.6 -2.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06340 -1.6 -10.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02240 -1.6 -4.1 methanogenesis marker 7 protein compare
MMP_RS03400 -1.6 -5.3 archease compare
MMP_RS06295 -1.6 -7.5 methanogenesis marker 14 protein compare
MMP_RS06230 -1.6 -4.3 helix-turn-helix domain-containing protein compare
MMP_RS06925 -1.6 -4.9 ribonuclease VapC4 compare
MMP_RS02010 -1.6 -8.2 PHP domain-containing protein compare
MMP_RS02800 -1.6 -5.9 nucleotidyltransferase domain-containing protein compare
MMP_RS00515 -1.6 -2.0 DUF655 domain-containing protein compare
MMP_RS07575 -1.6 -5.7 RNA ligase partner protein compare
MMP_RS01265 -1.6 -6.4 hypothetical protein compare
MMP_RS01985 -1.5 -7.2 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS04620 -1.5 -9.4 cobalt transporter CbiM compare
MMP_RS02235 -1.5 -10.4 CBS domain-containing protein compare
MMP_RS05430 -1.5 -4.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS07525 -1.4 -7.9 4Fe-4S binding protein compare
MMP_RS00295 -1.4 -4.4 gamma carbonic anhydrase family protein compare
MMP_RS00110 -1.4 -4.4 hypothetical protein compare
MMP_RS02875 -1.4 -9.5 chorismate pyruvate-lyase family protein compare
MMP_RS08100 -1.4 -8.7 8-amino-7-oxononanoate synthase compare
MMP_RS05875 -1.4 -4.8 hydroxyethylthiazole kinase compare
MMP_RS01365 -1.4 -3.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01385 -1.4 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03435 -1.3 -2.9 ketol-acid reductoisomerase compare
MMP_RS08105 -1.3 -9.7 6-carboxyhexanoate--CoA ligase compare
MMP_RS07645 -1.3 -6.2 aldehyde dehydrogenase family protein compare
MMP_RS00115 -1.3 -10.5 radical SAM protein compare
MMP_RS07685 -1.3 -8.9 TIGR01212 family radical SAM protein compare
MMP_RS07600 -1.3 -3.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06930 -1.3 -7.3 MBL fold metallo-hydrolase compare
MMP_RS01980 -1.3 -9.7 trimeric intracellular cation channel family protein compare
MMP_RS02355 -1.3 -3.9 30S ribosomal protein S27ae compare
MMP_RS03580 -1.3 -3.2 signal recognition particle-docking protein FtsY compare
MMP_RS06975 -1.3 -3.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01380 -1.2 -5.2 PHP domain-containing protein compare
MMP_RS08435 -1.2 -2.1 Era-like GTP-binding protein compare
MMP_RS06885 -1.2 -3.3 50S ribosome-binding GTPase compare
MMP_RS04775 -1.2 -4.4 adenosylhomocysteinase compare
MMP_RS02190 -1.2 -4.0 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS02345 -1.2 -3.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06105 -1.2 -8.1 hydrogenase maturation peptidase HycI compare
MMP_RS07605 -1.2 -4.7 diadenylate cyclase compare
MMP_RS07195 -1.2 -8.5 M20 family metallo-hydrolase compare
MMP_RS05845 -1.2 -1.9 tRNA-intron lyase compare
MMP_RS05545 -1.2 -5.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08300 -1.1 -1.4 metal-sulfur cluster assembly factor compare
MMP_RS06020 -1.1 -3.7 archaeoflavoprotein AfpA compare
MMP_RS05815 -1.1 -2.3 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07580 -1.1 -3.5 DUF356 domain-containing protein compare
MMP_RS02165 -1.1 -6.7 tRNA-dihydrouridine synthase compare
MMP_RS07730 -1.1 -2.3 pyruvate synthase subunit beta compare
MMP_RS09020 -1.1 -2.1 hypothetical protein compare
MMP_RS05345 -1.1 -4.9 hypothetical protein compare
MMP_RS00290 -1.1 -5.3 hypothetical protein compare
MMP_RS01725 -1.1 -3.5 class I SAM-dependent methyltransferase family protein compare
MMP_RS01720 -1.1 -1.6 replication factor C large subunit compare
MMP_RS07555 -1.1 -1.2 monovalent cation/H+ antiporter subunit E compare
MMP_RS06315 -1.0 -1.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08445 -1.0 -4.5 DUF2099 family protein compare
MMP_RS05540 -1.0 -4.0 hypothetical protein compare
MMP_RS05765 -1.0 -7.4 M42 family metallopeptidase compare
MMP_RS03250 -1.0 -2.1 MJ1244 family protein compare
MMP_RS01545 -1.0 -1.8 CBS domain-containing protein compare
MMP_RS06865 -1.0 -2.5 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02145 -1.0 -4.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS00320 -1.0 -2.7 class I SAM-dependent methyltransferase compare
MMP_RS00735 -1.0 -5.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06110 -1.0 -2.5 ATP-dependent protease LonB compare
MMP_RS00315 -1.0 -3.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08440 -1.0 -2.3 cell division protein SepF compare
MMP_RS01830 -0.9 -2.7 tRNA-Val compare
MMP_RS05550 -0.9 -0.9 cation:proton antiporter compare
MMP_RS07700 -0.9 -6.1 DUF1188 domain-containing protein compare
MMP_RS07425 -0.9 -4.6 GTP-binding protein compare
MMP_RS03445 -0.9 -1.4 methanogenesis marker 17 protein compare
MMP_RS06120 -0.9 -2.8 UPF0147 family protein compare
MMP_RS07200 -0.9 -4.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04870 -0.9 -5.0 TIGR02253 family HAD-type hydrolase compare
MMP_RS06215 -0.9 -2.7 30S ribosomal protein S6e compare
MMP_RS03110 -0.9 -4.7 glycosyltransferase family 2 protein compare
MMP_RS08320 -0.9 -4.5 molybdopterin molybdotransferase MoeA compare
MMP_RS05265 -0.9 -2.2 2-isopropylmalate synthase compare
MMP_RS07750 -0.9 -3.5 DUF357 domain-containing protein compare
MMP_RS07755 -0.9 -1.6 DUF555 domain-containing protein compare
MMP_RS06200 -0.9 -6.6 M24 family metallopeptidase compare
MMP_RS03095 -0.9 -6.1 diphthine synthase compare
MMP_RS06940 -0.8 -2.2 polyprenyl diphosphate synthase compare
MMP_RS07695 -0.8 -3.8 DUF3236 domain-containing protein compare
MMP_RS00985 -0.8 -4.1 CDC48 family AAA ATPase compare
MMP_RS00130 -0.8 -1.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS03155 -0.8 -5.2 precorrin-6A reductase compare
MMP_RS01840 -0.8 -5.3 TIGR00289 family protein compare
MMP_RS08330 -0.8 -4.2 NADH-quinone oxidoreductase subunit H compare
MMP_RS01250 -0.8 -3.3 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00915 -0.8 -5.2 DUF116 domain-containing protein compare
MMP_RS04850 -0.8 -7.0 UPF0254 family protein compare
MMP_RS07775 -0.8 -5.4 alanine dehydrogenase compare
MMP_RS00730 -0.8 -3.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05425 -0.8 -3.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00050 -0.8 -5.0 AarF/UbiB family protein compare
MMP_RS00120 -0.8 -4.3 LysR family transcriptional regulator compare
MMP_RS01795 -0.8 -1.2 methanogenesis marker 6 protein compare
MMP_RS07765 -0.7 -4.9 sodium:alanine symporter family protein compare
MMP_RS05510 -0.7 -4.1 Rrf2 family transcriptional regulator compare
MMP_RS05925 -0.7 -2.5 small nuclear ribonucleoprotein compare
MMP_RS07385 -0.7 -1.3 protein translocase SEC61 complex subunit gamma compare
MMP_RS07790 -0.7 -5.0 segregation/condensation protein A compare
MMP_RS00725 -0.7 -4.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05245 -0.7 -5.4 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08725 -0.7 -1.1 Ni/Fe hydrogenase subunit alpha compare
MMP_RS05250 -0.7 -1.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS02130 -0.7 -2.6 zinc metalloprotease HtpX compare
MMP_RS00040 -0.7 -3.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03140 -0.7 -4.9 hypothetical protein compare
MMP_RS02245 -0.7 -2.7 hypothetical protein compare
MMP_RS02885 -0.7 -5.3 molybdopterin biosynthesis protein compare
MMP_RS00810 -0.7 -3.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00720 -0.6 -3.7 metal-dependent hydrolase compare
MMP_RS01445 -0.6 -3.4 hypothetical protein compare
MMP_RS06980 -0.6 -4.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS07630 -0.6 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS07190 -0.6 -3.2 chromosome segregation protein SMC compare
MMP_RS08690 -0.6 -4.7 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMP_RS03590 -0.6 -3.8 METTL5 family protein compare
MMP_RS01800 -0.6 -2.2 TIGR00303 family protein compare
MMP_RS05445 -0.6 -4.0 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS08165 -0.6 -0.6 phosphoglycerate dehydrogenase compare
MMP_RS05095 -0.6 -4.2 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS00475 -0.6 -4.4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in rich t1 experiments