Experiment set4IT057 for Pseudomonas fluorescens FW300-N2E3

Compare to:

LB with Furfuryl Alcohol 0.25 vol%

200 most important genes:

  gene name fitness t score description  
AO353_01685 -3.9 -2.6 hypothetical protein compare
AO353_09315 -3.9 -9.0 LysR family transcriptional regulator compare
AO353_03360 -3.7 -6.5 glucose-6-phosphate dehydrogenase compare
AO353_22685 -3.5 -2.4 peroxidase compare
AO353_10670 -3.5 -8.0 shikimate dehydrogenase compare
AO353_02070 -3.2 -7.5 prephenate dehydratase compare
AO353_17320 -3.2 -11.7 NADH:flavin oxidoreductase conserved
AO353_00310 -3.1 -8.3 transaldolase compare
AO353_06335 -3.1 -16.7 AMP nucleosidase compare
AO353_12500 -2.8 -1.9 shikimate kinase compare
AO353_03580 -2.6 -3.1 ATP-dependent DNA helicase RuvB compare
AO353_16585 -2.5 -10.9 S-formylglutathione hydrolase conserved
AO353_08005 -2.5 -6.8 thioesterase compare
AO353_16805 -2.5 -6.4 recombinase RecA compare
AO353_20510 -2.5 -2.8 amidase compare
AO353_07315 -2.4 -2.8 rRNA methyltransferase compare
AO353_18540 -2.4 -2.8 pseudouridine synthase compare
AO353_01485 -2.4 -7.8 ABC transporter compare
AO353_11850 -2.3 -5.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_14370 -2.2 -7.6 glucose-6-phosphate isomerase compare
AO353_00825 -2.2 -4.5 porin compare
AO353_01480 -2.2 -8.8 hypothetical protein compare
AO353_11750 -2.2 -2.9 ATPase compare
AO353_03615 -2.1 -3.7 cold-shock protein compare
AO353_08110 -2.1 -5.5 glutathione synthetase compare
AO353_12105 -2.1 -6.9 peptidase S41 compare
AO353_09885 -2.0 -3.7 transcriptional regulator PhoU compare
AO353_13925 -2.0 -3.5 XRE family transcriptional regulator compare
AO353_03585 -2.0 -3.2 ATP-dependent DNA helicase RuvA compare
AO353_09320 -2.0 -9.1 ATP-dependent DNA helicase RecG compare
AO353_13225 -2.0 -2.9 50S ribosomal protein L9 compare
AO353_06045 -2.0 -6.4 exodeoxyribonuclease V subunit beta compare
AO353_11165 -1.9 -9.4 hypothetical protein compare
AO353_10055 -1.9 -10.8 DNA helicase II compare
AO353_07355 -1.9 -5.3 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_04355 -1.9 -2.4 homoserine dehydrogenase compare
AO353_16810 -1.8 -4.3 recombinase RecX compare
AO353_10930 -1.8 -6.9 DNA polymerase I compare
AO353_05420 -1.7 -2.2 peptide chain release factor 3 compare
AO353_02250 -1.7 -3.0 chorismate synthase compare
AO353_11730 -1.7 -7.6 glutamate--cysteine ligase compare
AO353_16940 -1.7 -5.3 deoxycytidine triphosphate deaminase compare
AO353_04365 -1.7 -5.1 recombinase XerD compare
AO353_13200 -1.6 -9.3 exoribonuclease R compare
AO353_06040 -1.6 -2.4 exodeoxyribonuclease V subunit alpha compare
AO353_02710 -1.6 -9.0 (p)ppGpp synthetase compare
AO353_14740 -1.6 -3.0 GTP-binding protein compare
AO353_14775 -1.6 -5.9 hypothetical protein compare
AO353_03420 -1.6 -4.5 phosphogluconate dehydratase compare
AO353_03590 -1.6 -3.5 crossover junction endodeoxyribonuclease RuvC compare
AO353_06050 -1.6 -5.1 exodeoxyribonuclease V subunit gamma compare
AO353_27650 -1.6 -4.3 cell division protein FtsK compare
AO353_04520 -1.6 -4.9 elongation factor 4 compare
AO353_10885 -1.5 -5.0 metal ABC transporter permease compare
AO353_08880 -1.5 -2.6 exopolyphosphatase compare
AO353_08165 -1.4 -2.8 pyrroline-5-carboxylate reductase compare
AO353_10890 -1.4 -4.9 methionine ABC transporter ATP-binding protein compare
AO353_20170 -1.4 -4.2 trigger factor compare
AO353_09900 -1.4 -8.5 phosphate ABC transporter permease compare
AO353_24535 -1.4 -2.7 hypothetical protein compare
AO353_23720 -1.4 -3.8 BatB protein compare
AO353_08885 -1.4 -10.2 polyphosphate kinase compare
AO353_07610 -1.3 -0.9 hypothetical protein compare
AO353_09890 -1.3 -3.9 phosphate ABC transporter ATP-binding protein compare
AO353_13635 -1.3 -3.8 hypothetical protein compare
AO353_05690 -1.3 -2.9 SsrA-binding protein compare
AO353_13100 -1.3 -2.0 GTPase RsgA compare
AO353_04500 -1.3 -2.2 DNA repair protein RecO compare
AO353_13160 -1.3 -2.4 membrane protease HflC compare
AO353_04565 -1.2 -4.5 nucleoid-associated protein compare
AO353_20185 -1.2 -4.8 DNA-binding protein compare
AO353_10915 -1.2 -7.8 ABC transporter substrate-binding protein compare
AO353_05550 -1.2 -5.0 pseudouridine synthase compare
AO353_16580 -1.2 -7.4 S-(hydroxymethyl)glutathione dehydrogenase compare
AO353_13685 -1.2 -3.7 3-dehydroquinate dehydratase compare
AO353_09040 -1.2 -1.5 diaminopimelate epimerase compare
AO353_06865 -1.2 -8.7 catalase compare
AO353_03250 -1.2 -1.4 gluconokinase compare
AO353_16155 -1.2 -2.6 antibiotic biosynthesis monooxygenase compare
AO353_26945 -1.2 -2.1 transcriptional regulator compare
AO353_08115 -1.1 -4.4 energy transducer TonB compare
AO353_02000 -1.1 -2.9 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_00515 -1.1 -2.8 hypothetical protein compare
AO353_10900 -1.1 -5.9 hypothetical protein compare
AO353_16440 -1.1 -2.1 ArsC family transcriptional regulator compare
AO353_16495 -1.1 -4.2 zinc metallopeptidase RseP compare
AO353_23400 -1.1 -1.9 hypothetical protein compare
AO353_14400 -1.1 -3.2 Fis family transcriptional regulator compare
AO353_23730 -1.1 -1.6 hypothetical protein compare
AO353_06415 -1.1 -3.3 hypothetical protein compare
AO353_19090 -1.1 -1.9 MarR family transcriptional regulator compare
AO353_24260 -1.1 -1.4 hypothetical protein compare
AO353_28015 -1.1 -1.9 hypothetical protein compare
AO353_09905 -1.1 -5.8 phosphate-binding protein compare
AO353_08600 -1.0 -2.9 TetR family transcriptional regulator compare
AO353_09050 -1.0 -2.9 recombinase XerC compare
AO353_26965 -1.0 -4.9 alkyl hydroperoxide reductase compare
AO353_09875 -1.0 -1.9 hypothetical protein compare
AO353_10945 -1.0 -2.3 cytochrome C compare
AO353_14420 -1.0 -3.1 molecular chaperone DnaK compare
AO353_08465 -1.0 -7.0 phosphoenolpyruvate-protein phosphotransferase compare
AO353_03670 -1.0 -3.4 ornithine acetyltransferase compare
AO353_09720 -1.0 -1.5 hypothetical protein compare
AO353_06585 -1.0 -4.4 hypothetical protein compare
AO353_19605 -1.0 -2.0 hypothetical protein compare
AO353_16530 -1.0 -1.4 ribonuclease HII compare
AO353_03100 -1.0 -1.7 XRE family transcriptional regulator compare
AO353_19145 -1.0 -3.4 protease HtpX compare
AO353_26195 -1.0 -1.6 hypothetical protein compare
AO353_14220 -1.0 -1.4 ribosomal large subunit pseudouridine synthase D compare
AO353_18555 -1.0 -6.8 aromatic amino acid transporter compare
AO353_07645 -0.9 -1.2 sarcosine oxidase subunit gamma compare
AO353_01220 -0.9 -1.8 hypothetical protein compare
AO353_03795 -0.9 -3.0 fumarate hydratase compare
AO353_10905 -0.9 -5.2 zinc ABC transporter ATP-binding protein compare
AO353_11915 -0.9 -4.7 agmatine deiminase compare
AO353_09250 -0.9 -2.1 exodeoxyribonuclease III compare
AO353_00835 -0.9 -4.0 transporter compare
AO353_25640 -0.9 -1.9 AsnC family transcriptional regulator compare
AO353_10455 -0.9 -1.3 tRNA modification GTPase MnmE compare
AO353_15480 -0.9 -1.6 hypothetical protein compare
AO353_20925 -0.9 -1.4 hypothetical protein compare
AO353_25845 -0.9 -1.9 GNAT family acetyltransferase compare
AO353_02075 -0.9 -5.5 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_15170 -0.9 -2.0 cytochrome D ubiquinol oxidase subunit III compare
AO353_18960 -0.9 -0.9 terminase compare
AO353_23950 -0.9 -2.2 hypothetical protein compare
AO353_21625 -0.9 -1.8 Fe/S biogenesis protein NfuA compare
AO353_11945 -0.9 -1.2 4-oxalocrotonate tautomerase compare
AO353_22035 -0.9 -2.5 pyridoxine 5'-phosphate oxidase compare
AO353_20175 -0.8 -2.3 ATP-dependent Clp protease proteolytic subunit compare
AO353_16575 -0.8 -5.8 LysR family transcriptional regulator compare
AO353_09000 -0.8 -3.2 argininosuccinate lyase compare
AO353_02450 -0.8 -3.5 hypothetical protein compare
AO353_04175 -0.8 -2.9 glycerol uptake facilitator GlpF compare
AO353_11530 -0.8 -4.9 diguanylate cyclase compare
AO353_01190 -0.8 -1.2 hypothetical protein compare
AO353_14395 -0.8 -2.6 poly(A) polymerase compare
AO353_01595 -0.8 -1.8 Flp pilus assembly protein CpaB compare
AO353_03815 -0.8 -1.4 heme utilization protein compare
AO353_26550 -0.8 -1.4 hypothetical protein compare
AO353_00260 -0.8 -1.5 hypothetical protein compare
AO353_26190 -0.8 -2.5 hypothetical protein compare
AO353_27920 -0.8 -3.3 arginine N-succinyltransferase compare
AO353_13300 -0.8 -2.0 LOG family protein compare
AO353_24255 -0.8 -1.8 hypothetical protein compare
AO353_22800 -0.8 -1.8 sulfite reductase compare
AO353_15210 -0.8 -1.8 Zn-dependent hydrolase compare
AO353_06850 -0.8 -2.8 MFS transporter compare
AO353_04340 -0.8 -1.9 hypothetical protein compare
AO353_17750 -0.8 -1.6 transcriptional regulator compare
AO353_27665 -0.8 -4.2 arginyl-tRNA-protein transferase compare
AO353_17855 -0.8 -1.6 ribonuclease D compare
AO353_23835 -0.8 -1.8 hypothetical protein compare
AO353_00850 -0.8 -2.3 ribonuclease activity regulator protein RraA compare
AO353_26285 -0.8 -1.5 hypothetical protein compare
AO353_22810 -0.8 -1.0 hypothetical protein compare
AO353_08765 -0.8 -3.1 hypothetical protein compare
AO353_03020 -0.8 -4.0 arginine N-succinyltransferase compare
AO353_19165 -0.7 -3.7 MarR family transcriptional regulator compare
AO353_09950 -0.7 -2.9 aspartate ammonia-lyase compare
AO353_13050 -0.7 -2.4 DNA topoisomerase IV compare
AO353_10440 -0.7 -2.8 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
AO353_13080 -0.7 -3.9 thiosulfate sulfurtransferase compare
AO353_11770 -0.7 -1.1 molecular chaperone Hsp33 compare
AO353_21990 -0.7 -1.8 cytochrome C compare
AO353_11680 -0.7 -5.0 cysteine desulfhydrase compare
AO353_01915 -0.7 -1.1 GlcG protein compare
AO353_19565 -0.7 -2.3 vanillate O-demethylase oxidoreductase VanB compare
AO353_15685 -0.7 -3.0 formate dehydrogenase compare
AO353_16020 -0.7 -3.1 tRNA (cmo5U34)-methyltransferase compare
AO353_13800 -0.7 -2.2 hypothetical protein compare
AO353_24625 -0.7 -1.9 hypothetical protein compare
AO353_14060 -0.7 -2.3 hypothetical protein compare
AO353_02715 -0.7 -2.4 23S rRNA methyltransferase compare
AO353_23905 -0.7 -2.1 GntR family transcriptional regulator compare
AO353_17785 -0.7 -1.7 hypothetical protein compare
AO353_15875 -0.7 -2.5 23S rRNA (adenine(2503)-C2)-methyltransferase compare
AO353_14935 -0.7 -2.3 aminopeptidase compare
AO353_07685 -0.7 -2.3 hypothetical protein compare
AO353_25550 -0.7 -3.4 4-amino-4-deoxy-L-arabinose transferase compare
AO353_00090 -0.7 -1.8 hypothetical protein compare
AO353_02975 -0.7 -1.5 aspartate kinase compare
AO353_23710 -0.7 -2.7 protein BatD compare
AO353_12125 -0.7 -3.3 glutaredoxin compare
AO353_29010 -0.7 -3.0 hypothetical protein compare
AO353_19360 -0.7 -1.4 peroxiredoxin compare
AO353_13155 -0.7 -2.1 hypothetical protein compare
AO353_22215 -0.7 -1.9 hypothetical protein compare
AO353_08245 -0.7 -1.9 cell division ATP-binding protein FtsE compare
AO353_15905 -0.7 -3.1 outer membrane protein assembly factor BamB compare
AO353_08440 -0.7 -1.7 hypothetical protein compare
AO353_24595 -0.7 -1.6 hypothetical protein compare
AO353_02040 -0.7 -1.6 integration host factor subunit beta compare
AO353_10950 -0.7 -4.3 thiol:disulfide interchange protein compare
AO353_06495 -0.7 -2.3 gamma-glutamyl phosphate reductase compare
AO353_21830 -0.7 -5.1 chemotaxis protein CheY compare
AO353_21445 -0.7 -1.7 cation:proton antiporter compare
AO353_21905 -0.7 -1.5 hypothetical protein compare
AO353_09860 -0.7 -4.2 histidine kinase compare


Specific Phenotypes

For 8 genes in this experiment

For stress Furfuryl Alcohol in Pseudomonas fluorescens FW300-N2E3

For stress Furfuryl Alcohol across organisms