Experiment set4IT055 for Methanococcus maripaludis S2

Compare to:

Formate deepwell casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS01370 +3.1 24.1 acetate--CoA ligase family protein compare
MMP_RS08660 +1.4 7.7 DHH family phosphoesterase compare
MMP_RS03215 +1.3 10.7 MBL fold metallo-hydrolase compare
MMP_RS05535 +1.1 5.5 hypothetical protein compare
MMP_RS06555 +0.8 4.6 cupin domain-containing protein compare
MMP_RS01420 +0.8 2.9 hypothetical protein compare
MMP_RS01775 +0.7 2.6 TIGR00297 family protein compare
MMP_RS07415 +0.7 4.7 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS06545 +0.7 3.2 ferredoxin family protein compare
MMP_RS07115 +0.7 5.1 MBL fold metallo-hydrolase compare
MMP_RS03320 +0.7 2.6 metal-dependent transcriptional regulator compare
MMP_RS01650 +0.6 1.4 sulfurtransferase TusA family protein compare
MMP_RS00705 +0.6 2.1 hypothetical protein compare
MMP_RS08280 +0.6 3.2 proteasome assembly chaperone family protein compare
MMP_RS08315 +0.6 1.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS00395 +0.6 1.9 MGMT family protein compare
MMP_RS00945 +0.6 1.3 PadR family transcriptional regulator compare
MMP_RS05700 +0.6 4.6 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS01570 +0.6 1.6 hypothetical protein compare
MMP_RS06770 +0.5 3.9 DHH family phosphoesterase compare
MMP_RS06540 +0.5 2.9 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00080 +0.5 1.7 RecB-family nuclease compare
MMP_RS04480 +0.5 4.4 lysine 2 3-aminomutase compare
MMP_RS06575 +0.5 3.0 fluoride efflux transporter CrcB compare
MMP_RS02295 +0.5 3.7 TatD family hydrolase compare
MMP_RS00915 +0.4 2.6 DUF116 domain-containing protein compare
MMP_RS03080 +0.4 1.0 universal stress protein compare
MMP_RS04145 +0.4 1.3 hypothetical protein compare
MMP_RS07560 +0.4 2.8 prefoldin subunit alpha compare
MMP_RS08275 +0.4 3.2 hypothetical protein compare
MMP_RS08365 +0.4 1.6 energy conserving hydrogenase EhbF compare
MMP_RS02605 +0.4 0.6 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08370 +0.4 0.5 cation:proton antiporter subunit C compare
MMP_RS06275 +0.4 2.8 ATP-dependent DNA helicase compare
MMP_RS01525 +0.4 1.2 nucleoside-diphosphate kinase compare
MMP_RS02245 +0.4 1.7 hypothetical protein compare
MMP_RS02495 +0.4 1.7 hypothetical protein compare
MMP_RS02310 +0.4 1.1 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00910 +0.4 2.5 2-phosphosulfolactate phosphatase compare
MMP_RS06155 +0.4 1.9 DUF4186 domain-containing protein compare
MMP_RS08775 +0.4 1.9 methanogenesis marker 9 domain-containing protein compare
MMP_RS01260 +0.4 2.3 HDIG domain-containing protein compare
MMP_RS02675 +0.4 1.3 hypothetical protein compare
MMP_RS06570 +0.4 1.4 DUF190 domain-containing protein compare
MMP_RS00660 +0.4 2.7 alkaline phosphatase family protein compare
MMP_RS07895 +0.4 2.2 cytochrome c compare
MMP_RS00760 +0.4 2.9 branched-chain-amino-acid transaminase compare
MMP_RS08455 +0.4 1.2 multiprotein bridging factor aMBF1 compare
MMP_RS06550 +0.3 2.6 AMP-binding protein compare
MMP_RS01580 +0.3 2.1 PQQ-binding-like beta-propeller repeat protein compare
MMP_RS03385 +0.3 0.6 cation diffusion facilitator family transporter compare
MMP_RS01275 +0.3 2.7 class III signal peptide-containing protein compare
MMP_RS07805 +0.3 2.1 ABC transporter permease compare
MMP_RS00655 +0.3 1.4 hypothetical protein compare
MMP_RS09050 +0.3 1.3 CAP domain-containing protein compare
MMP_RS05460 +0.3 2.6 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS01785 +0.3 2.2 hypothetical protein compare
MMP_RS03235 +0.3 1.8 tRNA pseudouridine(13) synthase TruD compare
MMP_RS03150 +0.3 2.4 phosphoglycerate mutase compare
MMP_RS02315 +0.3 1.4 RimK family alpha-L-glutamate ligase compare
MMP_RS06535 +0.3 2.1 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS06860 +0.3 0.9 4Fe-4S binding protein compare
MMP_RS07120 +0.3 2.6 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS06335 +0.3 1.7 HAD family hydrolase compare
MMP_RS06765 +0.3 1.4 flap endonuclease-1 compare
MMP_RS07725 +0.3 1.1 4Fe-4S dicluster domain-containing protein compare
MMP_RS00675 +0.3 0.6 nitroreductase family protein compare
MMP_RS07890 +0.3 1.1 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS06875 +0.3 1.7 FAD-dependent oxidoreductase compare
MMP_RS07815 +0.3 0.7 DUF2120 domain-containing protein compare
MMP_RS07150 +0.3 2.0 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS02290 +0.3 1.9 MBL fold metallo-hydrolase compare
MMP_RS08615 +0.3 0.8 flagellar protein G compare
MMP_RS04030 +0.3 1.8 hypothetical protein compare
MMP_RS01620 +0.3 1.5 hypothetical protein compare
MMP_RS06435 +0.3 1.3 CBS domain-containing protein compare
MMP_RS02405 +0.3 1.3 hypothetical protein compare
MMP_RS08500 +0.2 1.7 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS07125 +0.2 1.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08285 +0.2 1.7 serine/threonine protein kinase compare
MMP_RS00145 +0.2 1.6 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS00285 +0.2 1.7 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS07615 +0.2 1.4 energy-coupling factor ABC transporter permease compare
MMP_RS07135 +0.2 1.8 coenzyme F420 hydrogenase subunit beta compare
MMP_RS05180 +0.2 1.9 Nre family DNA repair protein compare
MMP_RS01155 +0.2 1.9 XRE family transcriptional regulator compare
MMP_RS01090 +0.2 2.0 ABC transporter substrate-binding protein compare
MMP_RS04730 +0.2 1.9 flavodoxin family protein compare
MMP_RS03300 +0.2 0.4 TOBE domain-containing protein compare
MMP_RS00850 +0.2 1.5 TIGR01177 family methyltransferase compare
MMP_RS08340 +0.2 0.9 4Fe-4S binding protein compare
MMP_RS08485 +0.2 1.9 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS03890 +0.2 1.2 DUF2540 domain-containing protein compare
MMP_RS08310 +0.2 0.8 TMEM165/GDT1 family protein compare
MMP_RS07915 +0.2 1.2 DUF4870 domain-containing protein compare
MMP_RS05170 +0.2 1.4 lysine exporter LysO family protein compare
MMP_RS06495 +0.2 0.6 YkgJ family cysteine cluster protein compare
MMP_RS00630 +0.2 1.6 ECF transporter S component compare
MMP_RS07925 +0.2 1.4 haloacid dehalogenase compare
MMP_RS06485 +0.2 0.4 zinc ribbon domain-containing protein compare
MMP_RS05720 +0.2 0.8 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06250 +0.2 1.4 hypothetical protein compare
MMP_RS00140 +0.2 1.3 DUF192 domain-containing protein compare
MMP_RS05695 +0.2 1.5 phospholipase D-like domain-containing protein compare
MMP_RS00975 +0.2 1.7 HD domain-containing protein compare
MMP_RS07180 +0.2 1.5 DEAD/DEAH box helicase compare
MMP_RS07680 +0.2 1.1 DUF366 family protein compare
MMP_RS01630 +0.2 1.6 N-glycosylase/DNA lyase compare
MMP_RS01965 +0.2 1.1 DUF1616 domain-containing protein compare
MMP_RS05110 +0.2 1.4 16S ribosomal RNA methyltransferase A compare
MMP_RS03465 +0.2 0.5 adenine phosphoribosyltransferase compare
MMP_RS08580 +0.2 0.8 flagellin compare
MMP_RS05665 +0.2 0.7 phosphate ABC transporter permease subunit PstC compare
MMP_RS00955 +0.2 1.6 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS00240 +0.2 1.7 type II secretion system F family protein compare
MMP_RS02360 +0.2 1.3 hypothetical protein compare
MMP_RS07910 +0.2 1.2 NAD(P)H-hydrate dehydratase compare
MMP_RS08260 +0.2 1.3 DUF99 family protein compare
MMP_RS02770 +0.2 0.9 hypothetical protein compare
MMP_RS01540 +0.2 0.9 DUF504 domain-containing protein compare
MMP_RS05675 +0.2 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS04520 +0.2 0.8 nucleoside deaminase compare
MMP_RS01105 +0.2 1.1 hypothetical protein compare
MMP_RS03800 +0.2 1.1 hypothetical protein compare
MMP_RS07855 +0.2 1.1 class I SAM-dependent methyltransferase compare
MMP_RS05355 +0.2 0.3 hypothetical protein compare
MMP_RS05560 +0.2 0.9 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
MMP_RS01125 +0.2 1.1 thioredoxin family protein compare
MMP_RS07095 +0.2 0.5 PspC domain-containing protein compare
MMP_RS04985 +0.2 1.0 DUF2180 family protein compare
MMP_RS08085 +0.2 1.2 hypothetical protein compare
MMP_RS01635 +0.2 1.3 thiamine pyrophosphate-dependent enzyme compare
MMP_RS02475 +0.2 0.6 hypothetical protein compare
MMP_RS05435 +0.2 1.2 5'/3'-nucleotidase SurE compare
MMP_RS05715 +0.2 1.2 hypothetical protein compare
MMP_RS03875 +0.2 0.8 hypothetical protein compare
MMP_RS00665 +0.2 0.9 hypothetical protein compare
MMP_RS03130 +0.2 1.1 hypothetical protein compare
MMP_RS05825 +0.2 1.0 peptidyl-prolyl cis-trans isomerase compare
MMP_RS03020 +0.2 0.7 peptidylprolyl isomerase compare
MMP_RS01550 +0.2 1.2 DUF1624 domain-containing protein compare
MMP_RS02590 +0.2 1.2 low molecular weight phosphatase family protein compare
MMP_RS08855 +0.2 1.3 hypothetical protein compare
MMP_RS04625 +0.2 1.2 DEAD/DEAH box helicase compare
MMP_RS01160 +0.2 1.0 DMT family transporter compare
MMP_RS01285 +0.2 1.3 hypothetical protein compare
MMP_RS01150 +0.1 0.9 aldo/keto reductase compare
MMP_RS08400 +0.1 0.6 MJ0307 family thioredoxin compare
MMP_RS07800 +0.1 1.0 ATP-binding cassette domain-containing protein compare
MMP_RS01145 +0.1 1.1 ABC transporter ATP-binding protein compare
MMP_RS00825 +0.1 0.7 fumarylacetoacetate hydrolase family protein compare
MMP_RS03990 +0.1 1.1 recombinase family protein compare
MMP_RS02490 +0.1 0.7 hypothetical protein compare
MMP_RS06000 +0.1 1.0 divalent-cation tolerance protein CutA compare
MMP_RS06460 +0.1 0.7 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS00375 +0.1 1.0 ammonium transporter compare
MMP_RS06150 +0.1 1.1 hypothetical protein compare
MMP_RS08640 +0.1 1.3 TIM barrel protein compare
MMP_RS01055 +0.1 0.7 hypothetical protein compare
MMP_RS06840 +0.1 0.2 DNA-directed RNA polymerase subunit N compare
MMP_RS02730 +0.1 1.1 ModD protein compare
MMP_RS06515 +0.1 0.5 UPF0489 family protein compare
MMP_RS08835 +0.1 1.2 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS08945 +0.1 1.0 hypothetical protein compare
MMP_RS08535 +0.1 1.0 bis-aminopropyl spermidine synthase family protein compare
MMP_RS07130 +0.1 1.1 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS05830 +0.1 0.6 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08235 +0.1 1.1 hypothetical protein compare
MMP_RS04260 +0.1 0.9 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS05660 +0.1 1.0 phosphate ABC transporter substrate-binding protein compare
MMP_RS06745 +0.1 0.7 DUF2119 domain-containing protein compare
MMP_RS08350 +0.1 0.2 hypothetical protein compare
MMP_RS04150 +0.1 1.1 MFS transporter compare
MMP_RS05175 +0.1 0.8 hypothetical protein compare
MMP_RS04270 +0.1 0.8 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS00125 +0.1 0.4 DUF2798 domain-containing protein compare
MMP_RS07085 +0.1 0.9 ribonuclease HII compare
MMP_RS01130 +0.1 0.8 flavoprotein compare
MMP_RS08860 +0.1 1.0 MinD/ParA family protein compare
MMP_RS08130 +0.1 1.0 IGHMBP2 family helicase compare
MMP_RS04265 +0.1 0.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07860 +0.1 0.1 hypothetical protein compare
MMP_RS06045 +0.1 0.9 DNA polymerase compare
MMP_RS06305 +0.1 0.9 transporter substrate-binding domain-containing protein compare
MMP_RS01115 +0.1 1.0 molybdopterin molybdotransferase MoeA compare
MMP_RS01290 +0.1 1.1 class III signal peptide-containing protein compare
MMP_RS08360 +0.1 0.6 hypothetical protein compare
MMP_RS09045 +0.1 1.1 class III signal peptide-containing protein compare
MMP_RS01300 +0.1 1.0 hypothetical protein compare
MMP_RS03790 +0.1 1.0 hypothetical protein compare
MMP_RS01065 +0.1 0.9 alpha/beta hydrolase compare
MMP_RS06590 +0.1 0.5 GNAT family N-acetyltransferase compare
MMP_RS01685 +0.1 0.6 indolepyruvate oxidoreductase subunit beta compare
MMP_RS04530 +0.1 0.7 ABC transporter permease compare
MMP_RS06520 +0.1 0.7 DUF1786 domain-containing protein compare
MMP_RS06445 +0.1 0.9 DUF89 domain-containing protein compare
MMP_RS03830 +0.1 0.8 exodeoxyribonuclease VII large subunit compare
MMP_RS01320 +0.1 0.4 hypothetical protein compare
MMP_RS06300 +0.1 0.9 ABC transporter substrate-binding protein compare
MMP_RS08245 +0.1 0.8 DUF4013 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t1 experiments

For nutrient t1 Sodium acetate across organisms