Experiment set4IT053 for Pseudomonas fluorescens FW300-N2E2
N1B4wt with N2E2m denitrifying replicate B
Group: anaerobicMedia: UGA + Sodium pyruvate (15 mM) + Sodium nitrate (30 mM), pH=6.88
Culturing: pseudo6_N2E2_ML5, 100mL Serum Bottle, Anaerobic, at 30 (C), shaken=175 rpm
Growth: about 1.8 generations
By: Alex Aaring on 6/26/2015
Specific Phenotypes
For 6 genes in this experiment
For anaerobic Sodium pyruvate in Pseudomonas fluorescens FW300-N2E2
For anaerobic Sodium pyruvate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Nitrate and nitrite ammonification | 4 |
| Dissimilatory nitrite reductase | 1 |
| Ribonucleotide reduction | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| nitrate reduction I (denitrification) | 5 | 5 | 1 |
| nitrate reduction VII (denitrification) | 5 | 5 | 1 |