Experiment set4IT053 for Bifidobacterium breve UCC2003
Recovery broth with Neomycin trisulfate salt hydrate 0.4 mM
Group: stressMedia: Recovery broth + Neomycin trisulfate salt hydrate (0.4 mM), pH=6.8
Culturing: Bifido_ML2, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Anthony Shiver on 2/15/2020
Specific Phenotypes
For 5 genes in this experiment
For stress Neomycin trisulfate salt hydrate in Bifidobacterium breve UCC2003
For stress Neomycin trisulfate salt hydrate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Queuosine-Archaeosine Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Purine metabolism
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| queuosine biosynthesis I (de novo) | 4 | 1 | 1 |
| queuosine biosynthesis III (queuosine salvage) | 5 | 1 | 1 |