Experiment set4IT048 for Methanococcus maripaludis S2

Compare to:

H2 deepwell autotrophic conditions

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03620 +2.5 14.3 hypothetical protein compare
MMP_RS03615 +2.4 17.4 4Fe-4S binding protein compare
MMP_RS00240 +1.5 12.7 type II secretion system F family protein compare
MMP_RS01310 +1.5 10.7 hypothetical protein compare
MMP_RS01280 +1.5 11.3 DUF515 domain-containing protein compare
MMP_RS03385 +1.4 2.2 cation diffusion facilitator family transporter compare
MMP_RS08855 +1.4 9.8 hypothetical protein compare
MMP_RS04550 +1.4 12.0 S-layer protein compare
MMP_RS01285 +1.4 9.8 hypothetical protein compare
MMP_RS01290 +1.3 8.2 class III signal peptide-containing protein compare
MMP_RS09055 +1.3 2.0 CAP domain-containing protein compare
MMP_RS01305 +1.3 11.0 hypothetical protein compare
MMP_RS03090 +1.3 6.0 cation:proton antiporter compare
MMP_RS06840 +1.3 1.9 DNA-directed RNA polymerase subunit N compare
MMP_RS01295 +1.3 9.0 hypothetical protein compare
MMP_RS08860 +1.3 5.4 MinD/ParA family protein compare
MMP_RS00250 +1.3 10.2 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00245 +1.2 10.5 type II secretion system F family protein compare
MMP_RS08665 +1.2 10.5 hypothetical protein compare
MMP_RS01370 +1.2 6.8 acetate--CoA ligase family protein compare
MMP_RS09045 +1.1 7.5 class III signal peptide-containing protein compare
MMP_RS01570 +1.1 2.5 hypothetical protein compare
MMP_RS03125 +1.1 4.4 cell division ATPase MinD compare
MMP_RS07120 +1.0 6.1 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS01525 +1.0 2.6 nucleoside-diphosphate kinase compare
MMP_RS01315 +1.0 8.5 DUF2341 domain-containing protein compare
MMP_RS07135 +1.0 5.6 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08580 +1.0 2.9 flagellin compare
MMP_RS01270 +0.9 6.3 prepilin peptidase compare
MMP_RS02675 +0.9 1.3 hypothetical protein compare
MMP_RS08940 +0.8 1.5 MetS family NSS transporter small subunit compare
MMP_RS00140 +0.8 4.2 DUF192 domain-containing protein compare
MMP_RS02415 +0.8 1.6 site-specific integrase compare
MMP_RS08675 +0.8 1.9 class III signal peptide-containing protein compare
MMP_RS08775 +0.8 3.2 methanogenesis marker 9 domain-containing protein compare
MMP_RS06600 +0.8 0.6 class III signal peptide-containing protein compare
MMP_RS07130 +0.8 4.6 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS06540 +0.7 2.2 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS09025 +0.7 1.1 hypothetical protein compare
MMP_RS07890 +0.7 2.2 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05675 +0.7 2.3 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS01300 +0.7 4.8 hypothetical protein compare
MMP_RS07805 +0.7 4.1 ABC transporter permease compare
MMP_RS01655 +0.7 3.2 DsrE family protein compare
MMP_RS05825 +0.7 2.7 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08275 +0.7 4.7 hypothetical protein compare
MMP_RS07125 +0.7 2.1 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08980 +0.7 2.0 hypothetical protein compare
MMP_RS06870 +0.7 3.0 DedA family protein compare
MMP_RS08930 +0.6 1.7 hypothetical protein compare
MMP_RS08615 +0.6 1.7 flagellar protein G compare
MMP_RS06175 +0.6 4.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS05910 +0.6 2.1 cell division ATPase MinD compare
MMP_RS07765 +0.6 3.0 sodium:alanine symporter family protein compare
MMP_RS01320 +0.6 1.7 hypothetical protein compare
MMP_RS05985 +0.6 1.6 hypothetical protein compare
MMP_RS03340 +0.6 0.7 ABC transporter ATP-binding protein compare
MMP_RS08400 +0.6 2.4 MJ0307 family thioredoxin compare
MMP_RS08285 +0.6 2.6 serine/threonine protein kinase compare
MMP_RS01275 +0.5 3.1 class III signal peptide-containing protein compare
MMP_RS05785 +0.5 4.2 ATP-binding protein compare
MMP_RS07180 +0.5 2.3 DEAD/DEAH box helicase compare
MMP_RS01965 +0.5 1.1 DUF1616 domain-containing protein compare
MMP_RS06225 +0.5 2.3 DNA double-strand break repair nuclease NurA compare
MMP_RS07840 +0.5 1.9 ribonuclease III compare
MMP_RS03320 +0.5 1.8 metal-dependent transcriptional regulator compare
MMP_RS08670 +0.5 2.2 metallophosphoesterase compare
MMP_RS06140 +0.5 2.9 radical SAM protein compare
MMP_RS01085 +0.5 1.2 hypothetical protein compare
MMP_RS06550 +0.5 2.1 AMP-binding protein compare
MMP_RS08385 +0.5 2.7 ABC transporter substrate-binding protein compare
MMP_RS00395 +0.5 1.0 MGMT family protein compare
MMP_RS08290 +0.5 2.7 DNA-binding protein Alba compare
MMP_RS02405 +0.5 1.9 hypothetical protein compare
MMP_RS08850 +0.5 3.8 hypothetical protein compare
MMP_RS05635 +0.5 3.2 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS07330 +0.5 3.5 membrane protein compare
MMP_RS06525 +0.5 0.8 YciI family protein compare
MMP_RS01210 +0.5 2.3 sodium:solute symporter compare
MMP_RS02745 +0.5 0.8 hypothetical protein compare
MMP_RS00975 +0.4 3.3 HD domain-containing protein compare
MMP_RS07795 +0.4 2.6 site-2 protease family protein compare
MMP_RS08620 +0.4 2.3 flagellar accessory protein FlaH compare
MMP_RS02765 +0.4 1.5 ABC transporter ATP-binding protein compare
MMP_RS07570 +0.4 2.9 nucleotidyltransferase family protein compare
MMP_RS07900 +0.4 1.0 YeeE/YedE family protein compare
MMP_RS08480 +0.4 2.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS00965 +0.4 1.4 hypothetical protein compare
MMP_RS01620 +0.4 1.1 hypothetical protein compare
MMP_RS01165 +0.4 2.5 DUF434 domain-containing protein compare
MMP_RS08130 +0.4 3.0 IGHMBP2 family helicase compare
MMP_RS05720 +0.4 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS07850 +0.4 1.3 prephenate dehydratase compare
MMP_RS08325 +0.4 3.0 hypothetical protein compare
MMP_RS08610 +0.4 2.4 flagellar protein F compare
MMP_RS07095 +0.4 1.0 PspC domain-containing protein compare
MMP_RS08500 +0.4 1.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS02450 +0.4 1.3 hypothetical protein compare
MMP_RS07775 +0.4 1.4 alanine dehydrogenase compare
MMP_RS08160 +0.4 1.9 EamA family transporter compare
MMP_RS06500 +0.4 2.9 ATP-binding protein compare
MMP_RS04610 +0.4 1.7 Dabb family protein compare
MMP_RS05315 +0.4 0.7 hypothetical protein compare
MMP_RS02310 +0.4 0.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS04030 +0.4 1.4 hypothetical protein compare
MMP_RS00675 +0.4 0.5 nitroreductase family protein compare
MMP_RS00705 +0.4 0.8 hypothetical protein compare
MMP_RS06325 +0.4 0.8 hypothetical protein compare
MMP_RS06070 +0.4 2.8 iron ABC transporter substrate-binding protein compare
MMP_RS04035 +0.4 0.8 hypothetical protein compare
MMP_RS05035 +0.4 2.0 hypothetical protein compare
MMP_RS06545 +0.4 1.5 ferredoxin family protein compare
MMP_RS07770 +0.4 1.4 alanine racemase compare
MMP_RS02985 +0.4 0.8 hypothetical protein compare
MMP_RS07085 +0.4 2.3 ribonuclease HII compare
MMP_RS07680 +0.4 1.5 DUF366 family protein compare
MMP_RS01255 +0.4 1.9 amino acid ABC transporter ATP-binding protein compare
MMP_RS02595 +0.4 0.7 putative zinc-binding protein compare
MMP_RS03625 +0.4 2.1 cell wall-binding protein compare
MMP_RS07550 +0.4 2.6 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS06905 +0.4 0.8 hypothetical protein compare
MMP_RS07855 +0.4 2.0 class I SAM-dependent methyltransferase compare
MMP_RS06920 +0.4 1.8 AAA family ATPase compare
MMP_RS02635 +0.4 2.4 class I SAM-dependent methyltransferase compare
MMP_RS02365 +0.4 1.8 nitrogen fixation compare
MMP_RS07925 +0.4 1.1 haloacid dehalogenase compare
MMP_RS05490 +0.4 2.0 IMPACT family protein compare
MMP_RS00655 +0.3 1.2 hypothetical protein compare
MMP_RS00185 +0.3 2.4 potassium channel protein compare
MMP_RS03965 +0.3 1.0 hypothetical protein compare
MMP_RS00660 +0.3 2.0 alkaline phosphatase family protein compare
MMP_RS00990 +0.3 0.9 hypothetical protein compare
MMP_RS06990 +0.3 1.3 CatB-related O-acetyltransferase compare
MMP_RS05695 +0.3 1.4 phospholipase D-like domain-containing protein compare
MMP_RS02370 +0.3 1.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05670 +0.3 2.6 phosphate ABC transporter permease PstA compare
MMP_RS01130 +0.3 1.8 flavoprotein compare
MMP_RS04205 +0.3 1.2 carboxymuconolactone decarboxylase family protein compare
MMP_RS09030 +0.3 1.9 hypothetical protein compare
MMP_RS08630 +0.3 1.6 archaellar assembly protein FlaJ compare
MMP_RS06875 +0.3 1.3 FAD-dependent oxidoreductase compare
MMP_RS02475 +0.3 1.2 hypothetical protein compare
MMP_RS08250 +0.3 1.8 pyruvate kinase compare
MMP_RS01095 +0.3 1.2 iron ABC transporter permease compare
MMP_RS03120 +0.3 0.9 hypothetical protein compare
MMP_RS04530 +0.3 1.6 ABC transporter permease compare
MMP_RS01080 +0.3 1.3 DUF2202 domain-containing protein compare
MMP_RS02175 +0.3 0.3 DUF1611 domain-containing protein compare
MMP_RS08265 +0.3 1.0 rubrerythrin compare
MMP_RS08395 +0.3 1.7 DsrE family protein compare
MMP_RS06250 +0.3 1.4 hypothetical protein compare
MMP_RS08245 +0.3 1.6 DUF4013 domain-containing protein compare
MMP_RS08090 +0.3 1.2 hypothetical protein compare
MMP_RS01125 +0.3 1.2 thioredoxin family protein compare
MMP_RS01790 +0.3 1.5 restriction endonuclease compare
MMP_RS06970 +0.3 1.5 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS01870 +0.3 1.7 acyl-CoA dehydratase activase compare
MMP_RS08080 +0.3 1.5 YchF/TatD family DNA exonuclease compare
MMP_RS04410 +0.3 1.3 hypothetical protein compare
MMP_RS06075 +0.3 1.3 class I SAM-dependent methyltransferase compare
MMP_RS02540 +0.3 1.1 DUF2283 domain-containing protein compare
MMP_RS07915 +0.3 1.3 DUF4870 domain-containing protein compare
MMP_RS02770 +0.3 1.4 hypothetical protein compare
MMP_RS04445 +0.3 1.4 P-II family nitrogen regulator compare
MMP_RS06910 +0.3 1.5 RlmF-related methyltransferase compare
MMP_RS05940 +0.3 1.2 corrinoid protein compare
MMP_RS01495 +0.3 1.7 TraB/GumN family protein compare
MMP_RS00865 +0.3 1.1 SLC13 family permease compare
MMP_RS03070 +0.3 0.9 AzlD domain-containing protein compare
MMP_RS05990 +0.2 0.9 DsrE family protein compare
MMP_RS06045 +0.2 1.6 DNA polymerase compare
MMP_RS05665 +0.2 0.9 phosphate ABC transporter permease subunit PstC compare
MMP_RS01435 +0.2 1.4 DMT family transporter compare
MMP_RS03150 +0.2 1.4 phosphoglycerate mutase compare
MMP_RS03220 +0.2 0.6 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS08410 +0.2 1.2 DUF169 domain-containing protein compare
MMP_RS07650 +0.2 1.5 TldD/PmbA family protein compare
MMP_RS01160 +0.2 1.3 DMT family transporter compare
MMP_RS05820 +0.2 1.2 RNA-binding transcriptional accessory protein compare
MMP_RS00150 +0.2 1.2 AAA family ATPase compare
MMP_RS01055 +0.2 0.9 hypothetical protein compare
MMP_RS03820 +0.2 1.1 EamA family transporter compare
MMP_RS00960 +0.2 0.7 iron export ABC transporter permease subunit FetB compare
MMP_RS01650 +0.2 0.3 sulfurtransferase TusA family protein compare
MMP_RS05835 +0.2 0.2 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01785 +0.2 1.4 hypothetical protein compare
MMP_RS07835 +0.2 1.1 TldD/PmbA family protein compare
MMP_RS06150 +0.2 1.5 hypothetical protein compare
MMP_RS04735 +0.2 0.8 tautomerase family protein compare
MMP_RS08770 +0.2 1.4 hypothetical protein compare
MMP_RS04125 +0.2 1.1 TetR/AcrR family transcriptional regulator compare
MMP_RS02965 +0.2 1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS07715 +0.2 1.6 YfcE family phosphodiesterase compare
MMP_RS01515 +0.2 1.6 PINc/VapC family ATPase compare
MMP_RS07640 +0.2 1.2 mechanosensitive ion channel family protein compare
MMP_RS08535 +0.2 0.9 bis-aminopropyl spermidine synthase family protein compare
MMP_RS04090 +0.2 0.5 hypothetical protein compare
MMP_RS04945 +0.2 1.0 hypothetical protein compare
MMP_RS03550 +0.2 0.6 DUF2124 domain-containing protein compare
MMP_RS07150 +0.2 1.0 MTH895/ArsE family thioredoxin-like protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nutrient t2 experiments