Experiment set4IT048 for Methanococcus maripaludis JJ

Compare to:

Iron excess (2.5x) , formate media

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04415 +2.0 6.6 hypothetical protein compare
MMJJ_RS08130 +1.0 1.2 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS04005 +0.7 5.5 acetate--CoA ligase family protein compare
MMJJ_RS07240 +0.6 5.6 MBL fold metallo-hydrolase compare
MMJJ_RS05685 +0.5 4.0 class III signal peptide-containing protein compare
MMJJ_RS07235 +0.5 4.3 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS04105 +0.5 4.3 prepilin peptidase compare
MMJJ_RS01855 +0.5 4.0 MBL fold metallo-hydrolase compare
MMJJ_RS04955 +0.5 3.1 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS00150 +0.5 3.0 DUF2180 family protein compare
MMJJ_RS03805 +0.5 2.0 hypothetical protein compare
MMJJ_RS08830 +0.5 2.5 hypothetical protein compare
MMJJ_RS09120 +0.5 1.0 aspartate kinase compare
MMJJ_RS09295 +0.5 0.6 hypothetical protein compare
MMJJ_RS06275 +0.4 1.5 hypothetical protein compare
MMJJ_RS07185 +0.4 1.5 DUF371 domain-containing protein compare
MMJJ_RS01210 +0.4 1.4 hypothetical protein compare
MMJJ_RS08725 +0.4 3.3 flippase compare
MMJJ_RS04545 +0.4 1.5 PadR family transcriptional regulator compare
MMJJ_RS06090 +0.4 2.3 hypothetical protein compare
MMJJ_RS06585 +0.4 2.9 alanine racemase compare
MMJJ_RS06495 +0.4 1.4 hypothetical protein compare
MMJJ_RS07920 +0.4 2.7 6-carboxytetrahydropterin synthase QueD compare
MMJJ_RS05525 +0.4 2.4 GTP-binding protein compare
MMJJ_RS02270 +0.4 1.9 HEPN domain-containing protein compare
MMJJ_RS03725 +0.4 1.3 sulfurtransferase TusA family protein compare
MMJJ_RS06210 +0.4 2.4 hypothetical protein compare
MMJJ_RS06460 +0.4 2.9 cytochrome c compare
MMJJ_RS05335 +0.4 2.4 heavy metal-binding domain-containing protein compare
MMJJ_RS07260 +0.4 2.4 PspC domain-containing protein compare
MMJJ_RS07985 +0.4 1.8 hypothetical protein compare
MMJJ_RS05400 +0.4 1.9 CoA-binding protein compare
MMJJ_RS07230 +0.4 2.4 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS08485 +0.3 1.7 Lrp/AsnC family transcriptional regulator compare
MMJJ_RS07915 +0.3 1.7 CBS domain-containing protein compare
MMJJ_RS08100 +0.3 2.4 hypothetical protein compare
MMJJ_RS07820 +0.3 2.6 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMJJ_RS06190 +0.3 2.5 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06740 +0.3 1.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMJJ_RS07445 +0.3 2.3 RlmF-related methyltransferase compare
MMJJ_RS03375 +0.3 2.0 hypothetical protein compare
MMJJ_RS01590 +0.3 0.5 adenine phosphoribosyltransferase compare
MMJJ_RS06205 +0.3 2.1 EamA family transporter compare
MMJJ_RS04215 +0.3 2.6 DMT family transporter compare
MMJJ_RS00745 +0.3 1.6 hypothetical protein compare
MMJJ_RS04270 +0.3 1.9 DUF364 domain-containing protein compare
MMJJ_RS09050 +0.3 1.8 hypothetical protein compare
MMJJ_RS06770 +0.3 2.5 hypothetical protein compare
MMJJ_RS01825 +0.3 1.5 DNA repair and recombination protein RadB compare
MMJJ_RS08225 +0.3 1.1 peptidylprolyl isomerase compare
MMJJ_RS07025 +0.3 2.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS03835 +0.3 1.4 DUF504 domain-containing protein compare
MMJJ_RS07210 +0.3 2.3 AmmeMemoRadiSam system protein B compare
MMJJ_RS06440 +0.3 2.2 DUF4870 domain-containing protein compare
MMJJ_RS07220 +0.3 2.3 coenzyme F420 hydrogenase subunit beta compare
MMJJ_RS04345 +0.3 1.0 DUF2080 family transposase-associated protein compare
MMJJ_RS06535 +0.3 2.4 UPF0104 family protein compare
MMJJ_RS07225 +0.3 2.1 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS08390 +0.3 0.9 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS06735 +0.3 2.0 cobalt ECF transporter T component CbiQ compare
MMJJ_RS07815 +0.3 2.2 2-oxoacid:acceptor oxidoreductase family protein compare
MMJJ_RS05495 +0.3 2.0 MinD/ParA family protein compare
MMJJ_RS05960 +0.3 1.9 DUF169 domain-containing protein compare
MMJJ_RS06500 +0.3 1.7 class I SAM-dependent methyltransferase compare
MMJJ_RS06950 +0.3 1.9 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06685 +0.3 2.3 S-layer protein compare
MMJJ_RS06680 +0.3 1.6 DUF366 family protein compare
MMJJ_RS06515 +0.3 2.0 ribonuclease III compare
MMJJ_RS03850 +0.3 1.5 nucleoside-diphosphate kinase compare
MMJJ_RS06960 +0.3 2.3 CAP domain-containing protein compare
MMJJ_RS09065 +0.3 1.7 hypothetical protein compare
MMJJ_RS04135 +0.3 1.0 7-cyano-7-deazaguanine synthase QueC compare
MMJJ_RS05530 +0.3 1.3 roadblock/LC7 domain-containing protein compare
MMJJ_RS06470 +0.3 1.9 tripartite tricarboxylate transporter permease compare
MMJJ_RS01970 +0.3 1.3 hypothetical protein compare
MMJJ_RS05605 +0.2 1.2 hypothetical protein compare
MMJJ_RS06745 +0.2 1.7 energy-coupling factor ABC transporter permease compare
MMJJ_RS01010 +0.2 2.4 right-handed parallel beta-helix repeat-containing protein compare
MMJJ_RS08745 +0.2 2.0 glycosyltransferase family 9 protein compare
MMJJ_RS05975 +0.2 1.5 sulfurtransferase TusA family protein compare
MMJJ_RS05040 +0.2 1.8 7-carboxy-7-deazaguanine synthase QueE compare
MMJJ_RS06385 +0.2 1.2 hypothetical protein compare
MMJJ_RS05965 +0.2 2.0 MFS transporter compare
MMJJ_RS08165 +0.2 1.3 thermonuclease family protein compare
MMJJ_RS05200 +0.2 2.0 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS05510 +0.2 1.9 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS08400 +0.2 1.1 CoB--CoM heterodisulfide reductase subunit C compare
MMJJ_RS04780 +0.2 1.2 nucleic acid-binding protein compare
MMJJ_RS07800 +0.2 2.0 AMP-binding protein compare
MMJJ_RS08295 +0.2 2.0 iron ABC transporter substrate-binding protein compare
MMJJ_RS06280 +0.2 1.9 hypothetical protein compare
MMJJ_RS00155 +0.2 2.0 DUF2193 domain-containing protein compare
MMJJ_RS05500 +0.2 2.1 hypothetical protein compare
MMJJ_RS06120 +0.2 1.6 DUF4013 domain-containing protein compare
MMJJ_RS03040 +0.2 1.7 lactate utilization protein compare
MMJJ_RS02180 +0.2 1.3 DHH family phosphoesterase compare
MMJJ_RS07835 +0.2 1.6 UPF0489 family protein compare
MMJJ_RS07740 +0.2 1.5 DUF2334 domain-containing protein compare
MMJJ_RS01070 +0.2 0.5 PadR family transcriptional regulator compare
MMJJ_RS07810 +0.2 1.5 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS08365 +0.2 1.4 DsrE family protein compare
MMJJ_RS01300 +0.2 1.5 MarR family transcriptional regulator compare
MMJJ_RS05970 +0.2 0.5 MJ0307 family thioredoxin compare
MMJJ_RS08515 +0.2 1.0 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMJJ_RS05280 +0.2 0.3 hypothetical protein compare
MMJJ_RS05585 +0.2 1.5 hypothetical protein compare
MMJJ_RS08720 +0.2 1.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS07365 +0.2 1.7 CatB-related O-acetyltransferase compare
MMJJ_RS03575 +0.2 1.1 NUDIX hydrolase compare
MMJJ_RS03445 +0.2 1.0 hypothetical protein compare
MMJJ_RS09105 +0.2 1.7 AI-2E family transporter compare
MMJJ_RS05520 +0.2 1.6 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMJJ_RS03515 +0.2 1.4 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS06640 +0.2 1.6 YfcE family phosphodiesterase compare
MMJJ_RS05240 +0.2 1.8 type II secretion system F family protein compare
MMJJ_RS03345 +0.2 1.2 hypothetical protein compare
MMJJ_RS06045 +0.2 1.3 hypothetical protein compare
MMJJ_RS04500 +0.2 1.3 hypothetical protein compare
MMJJ_RS03285 +0.2 1.0 gamma-glutamylcyclotransferase compare
MMJJ_RS06080 +0.2 1.4 serine/threonine protein kinase compare
MMJJ_RS06555 +0.2 1.6 ATP-binding cassette domain-containing protein compare
MMJJ_RS07175 +0.2 1.6 DEAD/DEAH box helicase compare
MMJJ_RS05580 +0.2 1.4 methanogenesis marker 9 domain-containing protein compare
MMJJ_RS04055 +0.2 1.2 hypothetical protein compare
MMJJ_RS07620 +0.2 1.5 class I SAM-dependent rRNA methyltransferase compare
MMJJ_RS06550 +0.2 1.5 ABC transporter permease compare
MMJJ_RS06520 +0.2 1.3 TldD/PmbA family protein compare
MMJJ_RS05690 +0.2 1.8 hypothetical protein compare
MMJJ_RS07480 +0.2 1.5 FAD-dependent oxidoreductase compare
MMJJ_RS07795 +0.2 1.0 cupin domain-containing protein compare
MMJJ_RS05600 +0.2 1.6 sodium:solute symporter family protein compare
MMJJ_RS08285 +0.2 1.4 class I SAM-dependent methyltransferase compare
MMJJ_RS01515 +0.2 0.9 DUF2178 domain-containing protein compare
MMJJ_RS09300 +0.2 0.4 hypothetical protein compare
MMJJ_RS06810 +0.2 1.5 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha compare
MMJJ_RS03410 +0.2 1.1 hypothetical protein compare
MMJJ_RS00555 +0.2 1.2 hypothetical protein compare
MMJJ_RS04390 +0.2 1.4 rhomboid family intramembrane serine protease compare
MMJJ_RS05405 +0.2 1.5 DNA cytosine methyltransferase compare
MMJJ_RS03450 +0.2 1.0 hypothetical protein compare
MMJJ_RS04180 +0.2 0.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS00925 +0.2 0.9 hypothetical protein compare
MMJJ_RS08350 +0.2 1.6 heavy metal translocating P-type ATPase compare
MMJJ_RS04915 +0.2 1.5 protein-L-isoaspartate O-methyltransferase compare
MMJJ_RS07855 +0.2 1.3 YkgJ family cysteine cluster protein compare
MMJJ_RS00615 +0.2 0.9 nucleoside deaminase compare
MMJJ_RS05900 +0.2 1.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS08375 +0.2 1.3 ferritin compare
MMJJ_RS08630 +0.2 1.1 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS05785 +0.2 1.2 flagellin compare
MMJJ_RS02895 +0.2 1.3 ATP-binding protein compare
MMJJ_RS09005 +0.2 1.5 N-6 DNA methylase compare
MMJJ_RS06540 +0.2 0.6 DUF2120 domain-containing protein compare
MMJJ_RS05880 +0.2 1.5 hypothetical protein compare
MMJJ_RS06710 +0.2 1.5 TldD/PmbA family protein compare
MMJJ_RS00145 +0.2 1.2 aquaporin family protein compare
MMJJ_RS02230 +0.2 1.4 hypothetical protein compare
MMJJ_RS00810 +0.2 1.1 GTP-binding protein compare
MMJJ_RS07005 +0.2 0.6 transcription factor S compare
MMJJ_RS06450 +0.2 1.3 DUF3343 domain-containing protein compare
MMJJ_RS07215 +0.2 1.3 TIGR00341 family protein compare
MMJJ_RS06765 +0.2 1.3 hypothetical protein compare
MMJJ_RS07830 +0.2 1.2 DUF1786 domain-containing protein compare
MMJJ_RS00585 +0.2 1.4 S-layer protein compare
MMJJ_RS07450 +0.2 0.8 hypothetical protein compare
MMJJ_RS05695 +0.2 0.7 class III signal peptide-containing protein compare
MMJJ_RS09380 +0.2 0.5 hypothetical protein compare
MMJJ_RS00140 +0.2 0.7 hypothetical protein compare
MMJJ_RS06665 +0.2 0.8 DUF3236 domain-containing protein compare
MMJJ_RS08735 +0.2 1.3 hypothetical protein compare
MMJJ_RS06675 +0.2 1.2 TIGR01212 family radical SAM protein compare
MMJJ_RS06445 +0.2 1.3 hypothetical protein compare
MMJJ_RS05895 +0.2 1.3 ABC transporter permease compare
MMJJ_RS06790 +0.1 1.2 nucleotidyltransferase family protein compare
MMJJ_RS00790 +0.1 0.9 ribonuclease H family protein compare
MMJJ_RS04295 +0.1 1.2 DUF2202 domain-containing protein compare
MMJJ_RS07680 +0.1 1.0 glucose-6-phosphate isomerase compare
MMJJ_RS07015 +0.1 0.2 PFL family protein compare
MMJJ_RS07760 +0.1 0.9 GNAT family N-acetyltransferase compare
MMJJ_RS04535 +0.1 1.1 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMJJ_RS03595 +0.1 0.9 hypothetical protein compare
MMJJ_RS05340 +0.1 1.1 AAA family ATPase compare
MMJJ_RS08685 +0.1 1.1 phosphate ABC transporter permease subunit PstC compare
MMJJ_RS07890 +0.1 1.0 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMJJ_RS03330 +0.1 0.9 hypothetical protein compare
MMJJ_RS04560 +0.1 1.0 ABC transporter permease compare
MMJJ_RS06100 +0.1 0.9 rubrerythrin compare
MMJJ_RS08455 +0.1 0.6 tetratricopeptide repeat protein compare
MMJJ_RS08445 +0.1 0.7 cell division ATPase MinD compare
MMJJ_RS07270 +0.1 0.9 ribonuclease HII compare
MMJJ_RS05245 +0.1 1.0 type II secretion system F family protein compare
MMJJ_RS06430 +0.1 0.9 haloacid dehalogenase compare
MMJJ_RS06455 +0.1 0.9 YeeE/YedE family protein compare
MMJJ_RS01670 +0.1 0.6 hypothetical protein compare
MMJJ_RS01125 +0.1 0.5 hypothetical protein compare
MMJJ_RS09205 +0.1 0.7 hypothetical protein compare
MMJJ_RS06505 +0.1 0.6 prephenate dehydratase compare
MMJJ_RS02295 +0.1 1.1 hypothetical protein compare
MMJJ_RS05715 +0.1 1.1 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04120 +0.1 0.9 amino acid ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in iron experiments

For iron Iron (II) chloride tetrahydrate across organisms