Experiment set4IT046 for Methanococcus maripaludis S2

Compare to:

H2 deepwell autotrophic conditions

200 most important genes:

  gene name fitness t score description  
MMP_RS05500 -8.1 -7.0 2-isopropylmalate synthase compare
MMP_RS06975 -7.9 -1.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06285 -7.6 -2.0 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07845 -7.3 -2.2 LL-diaminopimelate aminotransferase compare
MMP_RS06400 -7.1 -1.6 4Fe-4S binding protein compare
MMP_RS01455 -7.0 -5.5 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS04615 -7.0 -3.0 PDGLE domain-containing protein compare
MMP_RS01175 -6.9 -3.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03450 -6.9 -2.0 glycine synthesis protein GlyXS (from data) compare
MMP_RS07345 -6.4 -5.2 glycine synthesis protein GlyXL (from data) compare
MMP_RS04620 -6.3 -12.1 cobalt transporter CbiM compare
MMP_RS01545 -6.2 -0.8 CBS domain-containing protein compare
MMP_RS03435 -6.1 -1.6 ketol-acid reductoisomerase compare
MMP_RS04685 -6.0 -2.8 DUF126 domain-containing protein compare
MMP_RS02195 -5.9 -3.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS08210 -5.9 -2.1 phosphatidylglycerophosphatase A compare
MMP_RS01020 -5.9 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07630 -5.7 -1.3 ATP-binding cassette domain-containing protein compare
MMP_RS03600 -5.6 -2.2 triose-phosphate isomerase compare
MMP_RS03315 -5.6 -1.2 ferrous iron transport protein A compare
MMP_RS01830 -5.5 -1.0 tRNA-Val compare
MMP_RS04605 -5.4 -4.0 cobalt ECF transporter T component CbiQ compare
MMP_RS05265 -5.4 -1.7 2-isopropylmalate synthase compare
MMP_RS06230 -5.3 -1.8 helix-turn-helix domain-containing protein compare
MMP_RS05070 -5.2 -8.4 4Fe-4S dicluster domain-containing protein compare
MMP_RS00305 -5.2 -1.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS05930 -5.2 -2.4 3-isopropylmalate dehydratase large subunit compare
MMP_RS02135 -5.1 -4.8 DUF5612 domain-containing protein compare
MMP_RS04215 -5.1 -6.0 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05085 -5.0 -10.1 AAA family ATPase compare
MMP_RS00750 -5.0 -2.3 fumarate hydratase compare
MMP_RS05100 -4.9 -21.1 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS02900 -4.9 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04500 -4.8 -16.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06270 -4.8 -6.2 TIGR00300 family protein compare
MMP_RS05075 -4.7 -18.1 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS08745 -4.7 -6.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05060 -4.7 -10.6 AAA family ATPase compare
MMP_RS03445 -4.7 -0.9 methanogenesis marker 17 protein compare
MMP_RS04780 -4.7 -2.8 ribonuclease P compare
MMP_RS06120 -4.7 -2.0 UPF0147 family protein compare
MMP_RS00300 -4.7 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08715 -4.7 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05080 -4.6 -12.3 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS07005 -4.6 -0.6 4Fe-4S binding protein compare
MMP_RS09020 -4.6 -1.7 hypothetical protein compare
MMP_RS03475 -4.6 -0.6 hypothetical protein compare
MMP_RS06895 -4.6 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS05090 -4.6 -10.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS01385 -4.6 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07185 -4.5 -10.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05920 -4.5 -0.6 50S ribosomal protein L37e compare
MMP_RS07390 -4.5 -2.3 cell division protein FtsZ compare
MMP_RS07380 -4.5 -2.0 transcription elongation factor Spt5 compare
MMP_RS02145 -4.5 -8.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS03700 -4.4 -11.1 sodium:proton antiporter compare
MMP_RS01005 -4.4 -1.1 riboflavin synthase compare
MMP_RS05095 -4.4 -6.4 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS06370 -4.4 -4.8 biotin synthase BioB compare
MMP_RS03640 -4.4 -3.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02240 -4.4 -3.5 methanogenesis marker 7 protein compare
MMP_RS07545 -4.3 -0.8 HTH domain-containing protein compare
MMP_RS06375 -4.3 -5.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS08105 -4.2 -7.5 6-carboxyhexanoate--CoA ligase compare
MMP_RS06730 -4.2 -2.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS08095 -4.2 -6.9 dethiobiotin synthase compare
MMP_RS04710 -4.2 -1.5 hypothetical protein compare
MMP_RS08720 -4.2 -1.5 4Fe-4S binding protein compare
MMP_RS01700 -4.2 -0.8 dihydroxy-acid dehydratase compare
MMP_RS08650 -4.1 -3.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05925 -4.1 -3.5 small nuclear ribonucleoprotein compare
MMP_RS08300 -4.1 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS01925 -4.1 -10.8 DUF1616 domain-containing protein compare
MMP_RS08635 -4.0 -1.8 UbiA family prenyltransferase compare
MMP_RS05065 -4.0 -3.9 CooT family nickel-binding protein compare
MMP_RS00515 -3.9 -0.7 DUF655 domain-containing protein compare
MMP_RS06885 -3.9 -2.6 50S ribosome-binding GTPase compare
MMP_RS08100 -3.9 -5.9 8-amino-7-oxononanoate synthase compare
MMP_RS07645 -3.9 -6.8 aldehyde dehydrogenase family protein compare
MMP_RS00695 -3.9 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01955 -3.8 -2.8 hypothetical protein compare
MMP_RS03015 -3.8 -9.6 GTP 3' 8-cyclase MoaA compare
MMP_RS05425 -3.8 -5.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03580 -3.7 -3.7 signal recognition particle-docking protein FtsY compare
MMP_RS05515 -3.7 -7.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01800 -3.7 -3.6 TIGR00303 family protein compare
MMP_RS07635 -3.7 -5.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06475 -3.6 -5.0 FAD-dependent oxidoreductase compare
MMP_RS05055 -3.6 -12.8 DUF166 domain-containing protein compare
MMP_RS06315 -3.6 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03025 -3.6 -5.3 molybdenum cofactor guanylyltransferase compare
MMP_RS07730 -3.6 -1.7 pyruvate synthase subunit beta compare
MMP_RS06350 -3.6 -6.2 HesA/MoeB/ThiF family protein compare
MMP_RS07735 -3.6 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01225 -3.5 -5.0 DUF5379 domain-containing protein compare
MMP_RS03035 -3.5 -3.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07600 -3.5 -2.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06295 -3.4 -7.0 methanogenesis marker 14 protein compare
MMP_RS05550 -3.4 -0.6 cation:proton antiporter compare
MMP_RS07195 -3.4 -8.7 M20 family metallo-hydrolase compare
MMP_RS03140 -3.4 -13.1 hypothetical protein compare
MMP_RS04720 -3.4 -2.8 DedA family protein compare
MMP_RS06355 -3.4 -2.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08240 -3.4 -5.8 methanogenesis marker 16 metalloprotein compare
MMP_RS02875 -3.4 -10.8 chorismate pyruvate-lyase family protein compare
MMP_RS07580 -3.3 -3.0 DUF356 domain-containing protein compare
MMP_RS00110 -3.3 -3.0 hypothetical protein compare
MMP_RS08790 -3.3 -2.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS04775 -3.3 -3.8 adenosylhomocysteinase compare
MMP_RS06340 -3.3 -6.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02280 -3.2 -0.8 DUF211 domain-containing protein compare
MMP_RS04790 -3.2 -12.4 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01905 -3.1 -12.1 glycosyltransferase compare
MMP_RS04890 -3.1 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07955 -3.1 -5.7 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS08330 -3.1 -4.3 NADH-quinone oxidoreductase subunit H compare
MMP_RS02010 -3.1 -8.6 PHP domain-containing protein compare
MMP_RS07555 -3.0 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS06930 -3.0 -13.1 MBL fold metallo-hydrolase compare
MMP_RS06020 -3.0 -3.6 archaeoflavoprotein AfpA compare
MMP_RS03145 -3.0 -6.1 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00685 -2.9 -3.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03960 -2.9 -0.8 hypothetical protein compare
MMP_RS08440 -2.9 -2.3 cell division protein SepF compare
MMP_RS03420 -2.9 -3.3 acetolactate synthase small subunit compare
MMP_RS08460 -2.9 -2.4 proteasome-activating nucleotidase compare
MMP_RS01265 -2.9 -1.8 hypothetical protein compare
MMP_RS01755 -2.9 -1.1 DUF2097 domain-containing protein compare
MMP_RS05250 -2.8 -1.4 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07575 -2.7 -3.8 RNA ligase partner protein compare
MMP_RS06630 -2.7 -1.0 UPF0058 family protein compare
MMP_RS07365 -2.7 -9.4 2-phosphoglycerate kinase compare
MMP_RS01900 -2.7 -11.6 hypothetical protein compare
MMP_RS01910 -2.6 -9.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07755 -2.6 -0.9 DUF555 domain-containing protein compare
MMP_RS06130 -2.6 -3.5 peptidylprolyl isomerase compare
MMP_RS01795 -2.6 -1.4 methanogenesis marker 6 protein compare
MMP_RS06105 -2.6 -7.8 hydrogenase maturation peptidase HycI compare
MMP_RS07875 -2.5 -5.7 hypothetical protein compare
MMP_RS07750 -2.5 -3.6 DUF357 domain-containing protein compare
MMP_RS02345 -2.5 -3.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08165 -2.5 -2.3 phosphoglycerate dehydrogenase compare
MMP_RS03400 -2.5 -1.9 archease compare
MMP_RS00985 -2.5 -5.4 CDC48 family AAA ATPase compare
MMP_RS08820 -2.4 -4.7 hypothetical protein compare
MMP_RS00520 -2.4 -1.5 RNA polymerase Rpb4 family protein compare
MMP_RS01220 -2.4 -6.0 hypothetical protein compare
MMP_RS06625 -2.4 -1.5 DNA primase compare
MMP_RS05815 -2.4 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS03390 -2.4 -5.7 malate dehydrogenase compare
MMP_RS06670 -2.3 -4.1 glucose-6-phosphate isomerase compare
MMP_RS03250 -2.3 -3.9 MJ1244 family protein compare
MMP_RS00895 -2.3 -3.4 hypothetical protein compare
MMP_RS08335 -2.3 -7.3 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS08645 -2.3 -5.1 UPF0179 family protein compare
MMP_RS01325 -2.3 -1.7 dihydroneopterin aldolase family protein compare
MMP_RS01915 -2.2 -11.5 DUF354 domain-containing protein compare
MMP_RS07710 -2.2 -5.7 cell division protein FtsZ compare
MMP_RS01960 -2.2 -0.5 hypothetical protein compare
MMP_RS02800 -2.2 -5.2 nucleotidyltransferase domain-containing protein compare
MMP_RS04585 -2.2 -9.7 AIR synthase related protein compare
MMP_RS06310 -2.2 -4.3 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS07445 -2.2 -5.4 helix-turn-helix domain-containing protein compare
MMP_RS01380 -2.2 -2.6 PHP domain-containing protein compare
MMP_RS05640 -2.1 -4.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07525 -2.1 -5.6 4Fe-4S binding protein compare
MMP_RS05555 -2.1 -1.0 DUF4040 domain-containing protein compare
MMP_RS08370 -2.1 -0.6 cation:proton antiporter subunit C compare
MMP_RS03095 -2.1 -5.1 diphthine synthase compare
MMP_RS01895 -2.1 -11.2 flippase compare
MMP_RS02355 -2.1 -2.5 30S ribosomal protein S27ae compare
MMP_RS01880 -2.1 -5.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05285 -2.0 -7.3 MMPL family transporter compare
MMP_RS07385 -2.0 -1.9 protein translocase SEC61 complex subunit gamma compare
MMP_RS01610 -2.0 -2.5 hypothetical protein compare
MMP_RS06725 -2.0 -6.5 hypothetical protein compare
MMP_RS03205 -2.0 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01500 -2.0 -1.7 CBS domain-containing protein compare
MMP_RS07615 -2.0 -4.3 energy-coupling factor ABC transporter permease compare
MMP_RS01975 -2.0 -9.7 hypothetical protein compare
MMP_RS08360 -1.9 -3.5 hypothetical protein compare
MMP_RS07425 -1.9 -4.2 GTP-binding protein compare
MMP_RS00735 -1.9 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04875 -1.9 -4.4 energy-converting hydrogenase B subunit P compare
MMP_RS07200 -1.9 -4.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01875 -1.9 -5.9 N-acetyltransferase compare
MMP_RS07620 -1.9 -3.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01725 -1.9 -3.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS01970 -1.9 -8.0 TIGR04279 domain-containing protein compare
MMP_RS07075 -1.9 -2.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS01890 -1.8 -2.5 nucleotide sugar dehydrogenase compare
MMP_RS01240 -1.8 -1.5 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS00295 -1.8 -1.9 gamma carbonic anhydrase family protein compare
MMP_RS07720 -1.8 -8.3 4Fe-4S binding protein compare
MMP_RS06980 -1.8 -5.3 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS08350 -1.8 -0.8 hypothetical protein compare
MMP_RS07605 -1.8 -1.9 diadenylate cyclase compare
MMP_RS00315 -1.8 -6.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02885 -1.8 -9.3 molybdopterin biosynthesis protein compare
MMP_RS08355 -1.7 -6.2 Na(+)/H(+) antiporter subunit B compare


Specific Phenotypes

For 1 genes in this experiment