Experiment set4IT045 for Methanococcus maripaludis JJ

Compare to:

Iron excess (2.5x) , H2 media

200 most important genes:

  gene name fitness t score description  
MMJJ_RS01810 -5.9 -2.4 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS04485 -5.8 -9.6 riboflavin synthase compare
MMJJ_RS03055 -5.8 -3.0 hypothetical protein compare
MMJJ_RS00580 -5.7 -2.3 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00570 -5.6 -2.2 ribonuclease P compare
MMJJ_RS05450 -5.4 -17.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS02090 -5.2 -5.1 tyramine--L-glutamate ligase compare
MMJJ_RS03895 -5.2 -4.3 hydrogenase expression/formation protein HypE compare
MMJJ_RS02045 -5.1 -3.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS03670 -5.1 -3.5 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS02920 -5.1 -2.3 30S ribosomal protein S27ae compare
MMJJ_RS03760 -5.0 -3.4 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS06930 -4.8 -2.7 type II methionyl aminopeptidase compare
MMJJ_RS06040 -4.8 -3.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS04520 -4.8 -6.5 coenzyme F430 synthase compare
MMJJ_RS01750 -4.8 -2.7 ferrous iron transport protein A compare
MMJJ_RS04475 -4.8 -4.4 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS06625 -4.7 -2.2 pyruvate synthase subunit PorB compare
MMJJ_RS05065 -4.7 -4.4 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS06375 -4.7 -4.3 UbiX family flavin prenyltransferase compare
MMJJ_RS00600 -4.7 -3.5 hydroxymethylbilane synthase compare
MMJJ_RS04200 -4.6 -8.3 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS01935 -4.6 -5.5 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS05995 -4.6 -2.4 ATP-binding cassette domain-containing protein compare
MMJJ_RS01600 -4.6 -2.8 radical SAM protein compare
MMJJ_RS03270 -4.6 -2.8 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS04995 -4.6 -5.4 Tfx family DNA-binding protein compare
MMJJ_RS08080 -4.5 -10.9 TIGR00300 family protein compare
MMJJ_RS07410 -4.5 -4.2 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS00270 -4.5 -3.8 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS00560 -4.4 -4.2 homoisocitrate dehydrogenase compare
MMJJ_RS07980 -4.4 -14.9 biotin synthase BioB compare
MMJJ_RS01690 -4.4 -3.0 methanogenesis marker 12 protein compare
MMJJ_RS04730 -4.4 -2.7 tyrosine decarboxylase MfnA compare
MMJJ_RS03005 -4.4 -3.0 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS06390 -4.4 -2.0 NADPH-dependent F420 reductase compare
MMJJ_RS05070 -4.4 -2.2 DNA primase catalytic subunit PriS compare
MMJJ_RS00275 -4.3 -3.0 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS00645 -4.3 -14.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03580 -4.3 -3.7 TIGR00303 family protein compare
MMJJ_RS07785 -4.3 -2.6 fumarate reductase subunit A compare
MMJJ_RS08035 -4.3 -9.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS07705 -4.3 -2.9 GTP-binding protein EngB compare
MMJJ_RS04050 -4.3 -2.2 dihydroneopterin aldolase family protein compare
MMJJ_RS00450 -4.3 -2.0 DUF126 domain-containing protein compare
MMJJ_RS06155 -4.3 -5.8 phosphatidylglycerophosphatase A compare
MMJJ_RS01870 -4.2 -2.2 methanogenesis marker 15 protein compare
MMJJ_RS03820 -4.2 -4.1 hydrogenase formation protein HypD compare
MMJJ_RS03150 -4.2 -7.0 2-phospho-L-lactate transferase compare
MMJJ_RS08625 -4.2 -5.7 magnesium/cobalt transporter CorA compare
MMJJ_RS01475 -4.2 -2.2 signal recognition particle-docking protein FtsY compare
MMJJ_RS03110 -4.2 -4.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06695 -4.2 -3.5 amidohydrolase compare
MMJJ_RS05810 -4.2 -5.7 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS03095 -4.2 -2.3 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS06175 -4.2 -2.1 DUF1743 domain-containing protein compare
MMJJ_RS06260 -4.1 -7.9 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS08535 -4.1 -4.0 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS08095 -4.1 -4.0 cobyric acid synthase CobQ compare
MMJJ_RS07950 -4.1 -3.4 4Fe-4S binding protein compare
MMJJ_RS06270 -4.1 -7.9 dethiobiotin synthase compare
MMJJ_RS03615 -4.1 -3.9 cobalt-precorrin-8 methylmutase compare
MMJJ_RS05260 -4.1 -7.3 ATP-grasp domain-containing protein compare
MMJJ_RS04800 -4.1 -7.7 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06485 -4.0 -2.6 phosphoglycerate kinase compare
MMJJ_RS05930 -4.0 -2.1 cell division protein SepF compare
MMJJ_RS05575 -4.0 -5.0 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS00205 -4.0 -6.1 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS03815 -4.0 -2.5 nascent polypeptide-associated complex protein compare
MMJJ_RS06725 -4.0 -14.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS00475 -4.0 -2.4 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05620 -4.0 -2.7 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS09175 -4.0 -1.3 anthranilate synthase component I compare
MMJJ_RS08850 -3.9 -2.2 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS03840 -3.9 -3.8 DHH family phosphoesterase compare
MMJJ_RS06840 -3.9 -2.7 nickel-dependent hydrogenase large subunit compare
MMJJ_RS08870 -3.9 -1.3 2-isopropylmalate synthase compare
MMJJ_RS03620 -3.9 -6.6 DUF2097 domain-containing protein compare
MMJJ_RS06510 -3.9 -2.9 LL-diaminopimelate aminotransferase compare
MMJJ_RS09190 -3.9 -2.2 tryptophan synthase subunit beta compare
MMJJ_RS02200 -3.9 -12.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS06760 -3.9 -3.8 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS05490 -3.8 -2.5 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05950 -3.8 -3.6 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS00215 -3.8 -2.7 CCA tRNA nucleotidyltransferase compare
MMJJ_RS07720 -3.7 -2.4 UPF0058 family protein compare
MMJJ_RS05380 -3.7 -1.2 hypothetical protein compare
MMJJ_RS05610 -3.7 -4.4 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03125 -3.7 -5.6 GMC oxidoreductase compare
MMJJ_RS09375 -3.7 -1.9 hypothetical protein compare
MMJJ_RS05590 -3.7 -2.2 homoserine dehydrogenase compare
MMJJ_RS04650 -3.7 -6.5 nitrogenase iron protein compare
MMJJ_RS04155 -3.6 -8.4 hypothetical protein compare
MMJJ_RS00125 -3.6 -2.2 KEOPS complex subunit Cgi121 compare
MMJJ_RS08155 -3.6 -4.6 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS03865 -3.6 -1.4 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS05225 -3.6 -1.1 Gar1/Naf1 family protein compare
MMJJ_RS03490 -3.6 -3.1 ribonuclease VapC compare
MMJJ_RS06200 -3.6 -3.0 phosphoglycerate dehydrogenase compare
MMJJ_RS08250 -3.6 -8.2 hydrogenase maturation peptidase HycI compare
MMJJ_RS06220 -3.6 -5.8 polyamine aminopropyltransferase compare
MMJJ_RS05650 -3.6 -3.6 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05780 -3.5 -3.2 flagellin compare
MMJJ_RS05330 -3.5 -2.1 DNA polymerase II large subunit compare
MMJJ_RS06110 -3.5 -2.0 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS04685 -3.5 -10.2 carbamoyltransferase HypF compare
MMJJ_RS08795 -3.5 -3.1 phosphoglucosamine mutase compare
MMJJ_RS01880 -3.5 -3.5 RlmE family RNA methyltransferase compare
MMJJ_RS06265 -3.5 -14.2 8-amino-7-oxononanoate synthase compare
MMJJ_RS07380 -3.5 -9.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04970 -3.5 -2.2 DUF655 domain-containing protein compare
MMJJ_RS04010 -3.4 -6.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS08320 -3.4 -2.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS04700 -3.4 -6.8 deoxyhypusine synthase compare
MMJJ_RS03785 -3.4 -2.9 hypothetical protein compare
MMJJ_RS08055 -3.4 -7.6 methanogenesis marker 14 protein compare
MMJJ_RS04675 -3.4 -8.0 thiamine pyrophosphate-binding protein compare
MMJJ_RS05295 -3.4 -12.5 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS07470 -3.4 -2.1 50S ribosome-binding GTPase compare
MMJJ_RS03875 -3.3 -5.2 CBS domain-containing protein compare
MMJJ_RS01410 -3.3 -6.9 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS09135 -3.3 -8.2 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS05445 -3.3 -2.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS06490 -3.3 -3.4 methanogenesis marker 2 protein compare
MMJJ_RS01355 -3.2 -3.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01755 -3.2 -2.6 ferrous iron transport protein B compare
MMJJ_RS06225 -3.2 -2.2 adenosylmethionine decarboxylase compare
MMJJ_RS08660 -3.2 -3.6 acetylornithine transaminase compare
MMJJ_RS06180 -3.2 -2.8 tryptophan--tRNA ligase compare
MMJJ_RS00355 -3.2 -3.2 ribonuclease P protein component 4 compare
MMJJ_RS08020 -3.1 -8.4 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03650 -3.1 -6.8 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07725 -3.1 -6.4 DNA primase DnaG compare
MMJJ_RS07000 -3.1 -2.0 TrkH family potassium uptake protein compare
MMJJ_RS07350 -3.1 -3.7 4Fe-4S binding protein compare
MMJJ_RS08925 -3.1 -14.8 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06700 -3.0 -6.4 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS08340 -3.0 -6.1 archaeoflavoprotein AfpA compare
MMJJ_RS07155 -3.0 -11.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS06240 -3.0 -2.6 dihydropteroate synthase-like protein compare
MMJJ_RS04975 -2.9 -2.0 glycosyltransferase family 4 protein compare
MMJJ_RS01350 -2.9 -7.7 sodium:proton antiporter compare
MMJJ_RS07345 -2.9 -8.6 homocysteine biosynthesis protein compare
MMJJ_RS05415 -2.9 -1.5 hypothetical protein compare
MMJJ_RS08010 -2.9 -6.8 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS06875 -2.9 -2.3 hypothetical protein compare
MMJJ_RS05720 -2.8 -2.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS06170 -2.8 -10.0 hypothetical protein compare
MMJJ_RS07415 -2.8 -2.6 polyprenyl diphosphate synthase compare
MMJJ_RS03170 -2.8 -8.0 DUF5612 domain-containing protein compare
MMJJ_RS09130 -2.8 -1.7 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS05655 -2.8 -5.2 HisA/HisF family protein compare
MMJJ_RS02275 -2.8 -3.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07875 -2.7 -2.1 FAD-dependent oxidoreductase compare
MMJJ_RS06905 -2.7 -2.3 hypothetical protein compare
MMJJ_RS08130 -2.7 -0.9 translation initiation factor IF-2 subunit gamma compare
MMJJ_RS07245 -2.7 -4.3 amidohydrolase family protein compare
MMJJ_RS05360 -2.7 -6.0 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS03995 -2.7 -7.1 PHP domain-containing protein compare
MMJJ_RS01345 -2.7 -4.5 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06715 -2.7 -8.7 lactaldehyde dehydrogenase compare
MMJJ_RS07430 -2.7 -3.7 ribonuclease VapC compare
MMJJ_RS07160 -2.7 -15.7 M20 family metallo-hydrolase compare
MMJJ_RS04875 -2.6 -1.6 tRNA-Lys compare
MMJJ_RS04670 -2.6 -3.4 DUF2117 domain-containing protein compare
MMJJ_RS06250 -2.6 -2.6 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS01200 -2.6 -3.0 PRC-barrel domain-containing protein compare
MMJJ_RS03295 -2.6 -11.3 PHP domain-containing protein compare
MMJJ_RS04505 -2.6 -7.6 CDC48 family AAA ATPase compare
MMJJ_RS07375 -2.6 -7.3 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS04110 -2.6 -3.9 hypothetical protein compare
MMJJ_RS06255 -2.6 -7.2 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06805 -2.6 -2.8 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS03200 -2.6 -2.5 uroporphyrinogen-III synthase compare
MMJJ_RS01360 -2.6 -2.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS03830 -2.5 -9.4 CBS domain-containing protein compare
MMJJ_RS06035 -2.5 -7.9 NADH-quinone oxidoreductase subunit B family protein compare
MMJJ_RS04680 -2.5 -10.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMJJ_RS06865 -2.5 -3.3 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS06380 -2.4 -3.5 signal recognition particle protein Srp54 compare
MMJJ_RS04145 -2.4 -6.2 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS08500 -2.4 -6.7 L-sulfolactate dehydrogenase compare
MMJJ_RS03190 -2.4 -3.0 phosphopyruvate hydratase compare
MMJJ_RS02055 -2.4 -13.3 GTP 3',8-cyclase MoaA compare
MMJJ_RS04980 -2.4 -3.5 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS07455 -2.4 -6.9 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS05540 -2.4 -15.1 LysR family transcriptional regulator compare
MMJJ_RS05935 -2.4 -2.3 Era-like GTP-binding protein compare
MMJJ_RS06185 -2.3 -3.7 cobalamin biosynthesis protein compare
MMJJ_RS04615 -2.3 -2.8 methanogenesis marker 3 protein compare
MMJJ_RS06855 -2.3 -1.5 DUF2104 domain-containing protein compare
MMJJ_RS06750 -2.3 -1.9 homoaconitase large subunit compare
MMJJ_RS07360 -2.3 -1.4 TIGR00269 family protein compare
MMJJ_RS06730 -2.3 -5.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS08180 -2.3 -11.3 ABC transporter ATP-binding protein compare
MMJJ_RS08405 -2.3 -11.9 nickel-dependent hydrogenase large subunit compare
MMJJ_RS00530 -2.3 -12.2 cobalt ECF transporter T component CbiQ compare
MMJJ_RS08000 -2.3 -8.6 HesA/MoeB/ThiF family protein compare
MMJJ_RS03060 -2.2 -2.2 methanogenesis marker 7 protein compare
MMJJ_RS03845 -2.2 -4.8 translation initiation factor IF-2 compare


Specific Phenotypes

For 4 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms