Experiment set4IT044 for Pseudomonas fluorescens SBW25-INTG

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Growth at pH6 and carbon source D-Glucose

Group: pH
Media: soilextract_PNNL_Prosser_PlotA_B_20191220 + D-Glucose (10 mM) + Ammonium chloride (10 mM) + MES (40 mM), pH=6
Culturing: PseudoSBW25_INTG_ML3, 96 deep-well microplate; 1 mL volume, Aerobic, at 30 (C)
By: Joshua Elmore on 1/6/20

Specific Phenotypes

For 2 genes in this experiment

For pH D-Glucose in Pseudomonas fluorescens SBW25-INTG

For pH D-Glucose across organisms

SEED Subsystems

Subsystem #Specific
Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1
Phosphate metabolism 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
palmitoleate biosynthesis III (cyanobacteria) 2 1 1
phospholipid remodeling (phosphatidate, yeast) 2 1 1
oleate biosynthesis III (cyanobacteria) 3 2 1
CDP-diacylglycerol biosynthesis II 4 4 1
CDP-diacylglycerol biosynthesis I 4 4 1
phosphatidate biosynthesis (yeast) 5 3 1
CDP-diacylglycerol biosynthesis III 5 3 1
superpathway of phospholipid biosynthesis III (E. coli) 12 10 2
phosphatidylglycerol biosynthesis I 6 5 1
phosphatidylglycerol biosynthesis II 6 5 1
palmitoyl ethanolamide biosynthesis 6 2 1
superpathway of stearidonate biosynthesis (cyanobacteria) 6 2 1
diacylglycerol and triacylglycerol biosynthesis 7 3 1
stigma estolide biosynthesis 7 2 1
anandamide biosynthesis II 8 2 1
anandamide biosynthesis I 12 3 1
superpathway of cardiolipin biosynthesis (bacteria) 13 9 1
superpathway of phospholipid biosynthesis II (plants) 28 9 2
plasmalogen biosynthesis I (aerobic) 16 2 1