Experiment set4IT044 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate and casamino acid FREE

200 most important genes:

  gene name fitness t score description  
MMP_RS07845 -9.1 -2.0 LL-diaminopimelate aminotransferase compare
MMP_RS05500 -7.7 -7.6 2-isopropylmalate synthase compare
MMP_RS08210 -7.2 -1.9 phosphatidylglycerophosphatase A compare
MMP_RS03450 -7.1 -2.2 glycine synthesis protein GlyXS (from data) compare
MMP_RS01455 -6.9 -5.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS09020 -6.9 -1.5 hypothetical protein compare
MMP_RS06730 -6.8 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS06625 -6.7 -1.7 DNA primase compare
MMP_RS04615 -6.7 -3.1 PDGLE domain-containing protein compare
MMP_RS03600 -6.6 -1.9 triose-phosphate isomerase compare
MMP_RS01500 -6.4 -2.0 CBS domain-containing protein compare
MMP_RS00750 -6.4 -1.8 fumarate hydratase compare
MMP_RS01545 -6.3 -0.8 CBS domain-containing protein compare
MMP_RS01175 -6.2 -4.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03435 -6.2 -1.6 ketol-acid reductoisomerase compare
MMP_RS07345 -6.1 -5.4 glycine synthesis protein GlyXL (from data) compare
MMP_RS01020 -6.0 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06895 -6.0 -1.9 selenocysteine-specific translation elongation factor compare
MMP_RS04620 -5.9 -13.7 cobalt transporter CbiM compare
MMP_RS07730 -5.7 -1.6 pyruvate synthase subunit beta compare
MMP_RS03035 -5.7 -3.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03315 -5.7 -1.3 ferrous iron transport protein A compare
MMP_RS06400 -5.6 -1.7 4Fe-4S binding protein compare
MMP_RS05265 -5.5 -1.7 2-isopropylmalate synthase compare
MMP_RS04605 -5.4 -4.6 cobalt ECF transporter T component CbiQ compare
MMP_RS08745 -5.3 -7.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05930 -5.3 -2.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS04215 -5.3 -6.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS04685 -5.2 -3.2 DUF126 domain-containing protein compare
MMP_RS01005 -5.1 -0.9 riboflavin synthase compare
MMP_RS06375 -5.1 -6.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS08650 -5.1 -3.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06270 -4.9 -6.0 TIGR00300 family protein compare
MMP_RS05085 -4.9 -11.2 AAA family ATPase compare
MMP_RS08635 -4.9 -1.6 UbiA family prenyltransferase compare
MMP_RS03445 -4.8 -0.9 methanogenesis marker 17 protein compare
MMP_RS05080 -4.8 -14.5 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS06120 -4.8 -2.0 UPF0147 family protein compare
MMP_RS00300 -4.8 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06230 -4.8 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS05075 -4.8 -17.4 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS05090 -4.8 -11.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS05550 -4.7 -0.6 cation:proton antiporter compare
MMP_RS05070 -4.7 -8.8 4Fe-4S dicluster domain-containing protein compare
MMP_RS03015 -4.6 -9.1 GTP 3' 8-cyclase MoaA compare
MMP_RS05060 -4.6 -11.7 AAA family ATPase compare
MMP_RS05100 -4.6 -19.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS06285 -4.6 -2.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07185 -4.5 -12.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS04720 -4.5 -2.5 DedA family protein compare
MMP_RS08105 -4.5 -7.1 6-carboxyhexanoate--CoA ligase compare
MMP_RS02240 -4.5 -3.2 methanogenesis marker 7 protein compare
MMP_RS03960 -4.5 -0.8 hypothetical protein compare
MMP_RS07635 -4.5 -7.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06370 -4.4 -5.4 biotin synthase BioB compare
MMP_RS06350 -4.4 -6.8 HesA/MoeB/ThiF family protein compare
MMP_RS05095 -4.3 -7.8 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS04780 -4.3 -2.9 ribonuclease P compare
MMP_RS03640 -4.2 -3.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03700 -4.2 -9.2 sodium:proton antiporter compare
MMP_RS04500 -4.2 -17.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS02195 -4.1 -3.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01755 -4.1 -1.0 DUF2097 domain-containing protein compare
MMP_RS03400 -4.1 -2.9 archease compare
MMP_RS00110 -4.1 -2.5 hypothetical protein compare
MMP_RS01800 -4.1 -3.9 TIGR00303 family protein compare
MMP_RS04710 -4.0 -1.5 hypothetical protein compare
MMP_RS06885 -4.0 -2.8 50S ribosome-binding GTPase compare
MMP_RS07645 -4.0 -7.4 aldehyde dehydrogenase family protein compare
MMP_RS01325 -3.9 -2.1 dihydroneopterin aldolase family protein compare
MMP_RS08440 -3.9 -2.4 cell division protein SepF compare
MMP_RS02135 -3.9 -5.4 DUF5612 domain-containing protein compare
MMP_RS08100 -3.9 -6.0 8-amino-7-oxononanoate synthase compare
MMP_RS07390 -3.8 -2.3 cell division protein FtsZ compare
MMP_RS05555 -3.8 -1.2 DUF4040 domain-containing protein compare
MMP_RS02900 -3.8 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08095 -3.8 -8.3 dethiobiotin synthase compare
MMP_RS08790 -3.8 -2.2 translation initiation factor IF-2 subunit alpha compare
MMP_RS08720 -3.7 -1.6 4Fe-4S binding protein compare
MMP_RS02280 -3.7 -0.8 DUF211 domain-containing protein compare
MMP_RS01830 -3.7 -1.5 tRNA-Val compare
MMP_RS05515 -3.7 -5.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06020 -3.7 -4.5 archaeoflavoprotein AfpA compare
MMP_RS05425 -3.7 -5.3 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05055 -3.6 -16.0 DUF166 domain-containing protein compare
MMP_RS07735 -3.6 -0.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS04790 -3.6 -11.7 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08715 -3.6 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS02355 -3.5 -2.9 30S ribosomal protein S27ae compare
MMP_RS01385 -3.4 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08350 -3.4 -1.0 hypothetical protein compare
MMP_RS07600 -3.4 -2.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01700 -3.4 -0.8 dihydroxy-acid dehydratase compare
MMP_RS06295 -3.3 -7.7 methanogenesis marker 14 protein compare
MMP_RS07630 -3.3 -1.4 ATP-binding cassette domain-containing protein compare
MMP_RS06340 -3.3 -8.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04775 -3.2 -3.6 adenosylhomocysteinase compare
MMP_RS03140 -3.2 -13.9 hypothetical protein compare
MMP_RS01265 -3.2 -2.4 hypothetical protein compare
MMP_RS01795 -3.2 -1.7 methanogenesis marker 6 protein compare
MMP_RS03145 -3.2 -6.2 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS01610 -3.1 -3.2 hypothetical protein compare
MMP_RS05065 -3.1 -3.9 CooT family nickel-binding protein compare
MMP_RS06670 -3.1 -5.4 glucose-6-phosphate isomerase compare
MMP_RS07380 -3.1 -2.2 transcription elongation factor Spt5 compare
MMP_RS02010 -3.0 -8.8 PHP domain-containing protein compare
MMP_RS06475 -3.0 -5.3 FAD-dependent oxidoreductase compare
MMP_RS06355 -3.0 -1.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00685 -3.0 -3.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08820 -3.0 -5.9 hypothetical protein compare
MMP_RS03420 -2.9 -3.7 acetolactate synthase small subunit compare
MMP_RS08460 -2.9 -2.1 proteasome-activating nucleotidase compare
MMP_RS06105 -2.9 -9.8 hydrogenase maturation peptidase HycI compare
MMP_RS07005 -2.9 -0.6 4Fe-4S binding protein compare
MMP_RS01900 -2.9 -13.6 hypothetical protein compare
MMP_RS06925 -2.9 -2.1 ribonuclease VapC4 compare
MMP_RS07575 -2.9 -3.9 RNA ligase partner protein compare
MMP_RS03390 -2.8 -5.4 malate dehydrogenase compare
MMP_RS00515 -2.8 -0.9 DUF655 domain-containing protein compare
MMP_RS08165 -2.8 -2.4 phosphoglycerate dehydrogenase compare
MMP_RS08330 -2.8 -5.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS07075 -2.8 -4.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS05920 -2.8 -0.6 50S ribosomal protein L37e compare
MMP_RS02875 -2.8 -9.6 chorismate pyruvate-lyase family protein compare
MMP_RS01905 -2.7 -12.0 glycosyltransferase compare
MMP_RS00695 -2.7 -0.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07195 -2.7 -8.7 M20 family metallo-hydrolase compare
MMP_RS07875 -2.7 -5.1 hypothetical protein compare
MMP_RS07365 -2.7 -9.8 2-phosphoglycerate kinase compare
MMP_RS07955 -2.6 -6.7 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01380 -2.6 -4.0 PHP domain-containing protein compare
MMP_RS00305 -2.6 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS00895 -2.6 -3.6 hypothetical protein compare
MMP_RS00735 -2.6 -4.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07710 -2.6 -8.7 cell division protein FtsZ compare
MMP_RS05640 -2.6 -5.9 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07605 -2.5 -3.1 diadenylate cyclase compare
MMP_RS01910 -2.5 -10.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS01955 -2.5 -2.7 hypothetical protein compare
MMP_RS08435 -2.5 -2.0 Era-like GTP-binding protein compare
MMP_RS08240 -2.5 -7.3 methanogenesis marker 16 metalloprotein compare
MMP_RS01225 -2.5 -4.0 DUF5379 domain-containing protein compare
MMP_RS03580 -2.5 -2.8 signal recognition particle-docking protein FtsY compare
MMP_RS07750 -2.4 -4.2 DUF357 domain-containing protein compare
MMP_RS07525 -2.4 -7.7 4Fe-4S binding protein compare
MMP_RS03025 -2.4 -4.7 molybdenum cofactor guanylyltransferase compare
MMP_RS06725 -2.4 -9.1 hypothetical protein compare
MMP_RS01960 -2.4 -0.6 hypothetical protein compare
MMP_RS02145 -2.3 -5.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS02345 -2.3 -2.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07200 -2.3 -5.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00810 -2.3 -7.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01925 -2.3 -5.1 DUF1616 domain-containing protein compare
MMP_RS07615 -2.3 -6.6 energy-coupling factor ABC transporter permease compare
MMP_RS08645 -2.3 -5.4 UPF0179 family protein compare
MMP_RS04890 -2.2 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07755 -2.2 -0.9 DUF555 domain-containing protein compare
MMP_RS07445 -2.2 -4.5 helix-turn-helix domain-containing protein compare
MMP_RS05925 -2.1 -2.6 small nuclear ribonucleoprotein compare
MMP_RS07355 -2.1 -0.9 transcription factor S compare
MMP_RS01725 -2.1 -4.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS03205 -2.1 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00130 -2.1 -1.1 nickel-responsive transcriptional regulator NikR compare
MMP_RS03475 -2.1 -0.6 hypothetical protein compare
MMP_RS04585 -2.0 -8.1 AIR synthase related protein compare
MMP_RS02885 -2.0 -12.8 molybdopterin biosynthesis protein compare
MMP_RS01220 -2.0 -6.1 hypothetical protein compare
MMP_RS01915 -2.0 -11.0 DUF354 domain-containing protein compare
MMP_RS07580 -2.0 -2.4 DUF356 domain-containing protein compare
MMP_RS01540 -2.0 -2.3 DUF504 domain-containing protein compare
MMP_RS04785 -2.0 -8.5 hypothetical protein compare
MMP_RS07540 -2.0 -3.6 CBS domain-containing protein compare
MMP_RS05845 -2.0 -1.5 tRNA-intron lyase compare
MMP_RS06940 -2.0 -2.0 polyprenyl diphosphate synthase compare
MMP_RS02190 -2.0 -2.3 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS01875 -2.0 -7.0 N-acetyltransferase compare
MMP_RS05540 -2.0 -2.0 hypothetical protein compare
MMP_RS01975 -2.0 -12.1 hypothetical protein compare
MMP_RS01895 -1.9 -9.4 flippase compare
MMP_RS07620 -1.9 -3.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07820 -1.9 -4.6 UPF0104 family protein compare
MMP_RS06630 -1.9 -0.9 UPF0058 family protein compare
MMP_RS08320 -1.9 -4.3 molybdopterin molybdotransferase MoeA compare
MMP_RS07385 -1.9 -1.9 protein translocase SEC61 complex subunit gamma compare
MMP_RS00900 -1.9 -1.2 50S ribosomal protein L39e compare
MMP_RS02235 -1.9 -7.3 CBS domain-containing protein compare
MMP_RS07625 -1.9 -2.6 cobalt ECF transporter T component CbiQ compare
MMP_RS03250 -1.8 -2.8 MJ1244 family protein compare
MMP_RS02800 -1.8 -3.5 nucleotidyltransferase domain-containing protein compare
MMP_RS08300 -1.8 -0.8 metal-sulfur cluster assembly factor compare
MMP_RS05950 -1.8 -7.8 nickel-dependent hydrogenase large subunit compare
MMP_RS00315 -1.8 -4.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08785 -1.8 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS02790 -1.8 -1.1 class III signal peptide-containing protein compare
MMP_RS00985 -1.8 -4.7 CDC48 family AAA ATPase compare
MMP_RS06770 -1.8 -7.4 DHH family phosphoesterase compare
MMP_RS08445 -1.8 -3.7 DUF2099 family protein compare
MMP_RS08370 -1.8 -0.6 cation:proton antiporter subunit C compare
MMP_RS04850 -1.7 -10.9 UPF0254 family protein compare
MMP_RS02130 -1.7 -5.5 zinc metalloprotease HtpX compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Mc_vitamins in Methanococcus maripaludis S2

For nutrient t2 Mc_vitamins across organisms