Experiment set4IT044 for Methanococcus maripaludis S2

Compare to:

H2 deepwell acetate and casamino acid FREE

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS03620 +3.1 18.6 hypothetical protein compare
MMP_RS03615 +3.0 14.1 4Fe-4S binding protein compare
MMP_RS04550 +2.3 16.2 S-layer protein compare
MMP_RS01310 +1.7 10.9 hypothetical protein compare
MMP_RS08860 +1.7 4.4 MinD/ParA family protein compare
MMP_RS01295 +1.6 8.1 hypothetical protein compare
MMP_RS00240 +1.6 9.4 type II secretion system F family protein compare
MMP_RS01290 +1.6 7.8 class III signal peptide-containing protein compare
MMP_RS05355 +1.5 1.3 hypothetical protein compare
MMP_RS00245 +1.5 10.8 type II secretion system F family protein compare
MMP_RS01285 +1.4 7.0 hypothetical protein compare
MMP_RS08855 +1.4 5.9 hypothetical protein compare
MMP_RS01305 +1.4 9.7 hypothetical protein compare
MMP_RS01280 +1.3 8.6 DUF515 domain-containing protein compare
MMP_RS08675 +1.3 3.1 class III signal peptide-containing protein compare
MMP_RS06840 +1.2 1.1 DNA-directed RNA polymerase subunit N compare
MMP_RS01315 +1.2 8.9 DUF2341 domain-containing protein compare
MMP_RS01270 +1.2 6.6 prepilin peptidase compare
MMP_RS03125 +1.2 3.9 cell division ATPase MinD compare
MMP_RS00250 +1.1 8.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS07860 +1.1 0.7 hypothetical protein compare
MMP_RS09045 +1.1 6.4 class III signal peptide-containing protein compare
MMP_RS03090 +1.1 3.8 cation:proton antiporter compare
MMP_RS08775 +1.1 4.3 methanogenesis marker 9 domain-containing protein compare
MMP_RS05635 +1.0 4.7 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS08665 +1.0 7.5 hypothetical protein compare
MMP_RS06070 +1.0 5.0 iron ABC transporter substrate-binding protein compare
MMP_RS00395 +1.0 1.5 MGMT family protein compare
MMP_RS01075 +1.0 1.5 hypothetical protein compare
MMP_RS05970 +1.0 3.1 class II SORL domain-containing protein compare
MMP_RS06175 +1.0 3.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS08090 +0.9 3.6 hypothetical protein compare
MMP_RS07330 +0.9 6.7 membrane protein compare
MMP_RS06715 +0.9 4.2 cache domain-containing protein compare
MMP_RS07815 +0.9 1.1 DUF2120 domain-containing protein compare
MMP_RS01750 +0.9 5.1 DUF63 family protein compare
MMP_RS02415 +0.9 2.0 site-specific integrase compare
MMP_RS06525 +0.9 1.0 YciI family protein compare
MMP_RS09025 +0.8 0.9 hypothetical protein compare
MMP_RS00140 +0.8 2.1 DUF192 domain-containing protein compare
MMP_RS02595 +0.8 1.1 putative zinc-binding protein compare
MMP_RS07890 +0.8 1.7 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS02490 +0.8 1.7 hypothetical protein compare
MMP_RS01275 +0.8 2.6 class III signal peptide-containing protein compare
MMP_RS01495 +0.8 3.1 TraB/GumN family protein compare
MMP_RS03220 +0.8 2.0 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07125 +0.8 1.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS08275 +0.8 5.1 hypothetical protein compare
MMP_RS02540 +0.8 3.1 DUF2283 domain-containing protein compare
MMP_RS06910 +0.8 3.2 RlmF-related methyltransferase compare
MMP_RS07770 +0.8 2.4 alanine racemase compare
MMP_RS03490 +0.8 1.2 DUF2115 domain-containing protein compare
MMP_RS07840 +0.8 1.9 ribonuclease III compare
MMP_RS03300 +0.8 0.7 TOBE domain-containing protein compare
MMP_RS01460 +0.8 2.1 hypothetical protein compare
MMP_RS05825 +0.8 1.7 peptidyl-prolyl cis-trans isomerase compare
MMP_RS07915 +0.8 2.4 DUF4870 domain-containing protein compare
MMP_RS02675 +0.8 1.7 hypothetical protein compare
MMP_RS07120 +0.7 3.4 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS02915 +0.7 2.7 amino acid ABC transporter permease compare
MMP_RS07130 +0.7 4.1 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS01370 +0.7 4.2 acetate--CoA ligase family protein compare
MMP_RS00325 +0.7 1.0 RNA-binding protein compare
MMP_RS01055 +0.7 2.3 hypothetical protein compare
MMP_RS08130 +0.7 3.6 IGHMBP2 family helicase compare
MMP_RS04610 +0.7 3.1 Dabb family protein compare
MMP_RS07905 +0.7 2.5 DUF3343 domain-containing protein compare
MMP_RS06500 +0.7 2.9 ATP-binding protein compare
MMP_RS08670 +0.7 2.2 metallophosphoesterase compare
MMP_RS02965 +0.7 2.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS03065 +0.7 1.3 AzlC family ABC transporter permease compare
MMP_RS03120 +0.7 2.0 hypothetical protein compare
MMP_RS01300 +0.6 3.7 hypothetical protein compare
MMP_RS03625 +0.6 3.0 cell wall-binding protein compare
MMP_RS08940 +0.6 0.7 MetS family NSS transporter small subunit compare
MMP_RS00905 +0.6 1.2 phenylacetate--CoA ligase compare
MMP_RS00280 +0.6 2.9 DUF2118 domain-containing protein compare
MMP_RS05325 +0.6 3.3 hypothetical protein compare
MMP_RS08615 +0.6 1.1 flagellar protein G compare
MMP_RS04520 +0.6 1.2 nucleoside deaminase compare
MMP_RS08200 +0.6 3.4 archaeosine synthase subunit alpha compare
MMP_RS00185 +0.6 2.9 potassium channel protein compare
MMP_RS04410 +0.6 2.0 hypothetical protein compare
MMP_RS06035 +0.6 3.5 glycosyltransferase family 2 protein compare
MMP_RS03340 +0.6 0.5 ABC transporter ATP-binding protein compare
MMP_RS08980 +0.6 2.0 hypothetical protein compare
MMP_RS02745 +0.6 0.8 hypothetical protein compare
MMP_RS08250 +0.6 3.1 pyruvate kinase compare
MMP_RS04430 +0.6 3.2 DUF1847 domain-containing protein compare
MMP_RS08215 +0.6 0.9 DUF483 domain-containing protein compare
MMP_RS08620 +0.6 1.6 flagellar accessory protein FlaH compare
MMP_RS01085 +0.6 0.9 hypothetical protein compare
MMP_RS05910 +0.6 1.3 cell division ATPase MinD compare
MMP_RS05865 +0.6 1.8 hypothetical protein compare
MMP_RS05965 +0.6 1.8 carboxymuconolactone decarboxylase family protein compare
MMP_RS05785 +0.6 3.4 ATP-binding protein compare
MMP_RS07135 +0.6 2.4 coenzyme F420 hydrogenase subunit beta compare
MMP_RS08580 +0.5 2.2 flagellin compare
MMP_RS03520 +0.5 1.1 YwbE family protein compare
MMP_RS02545 +0.5 2.5 hypothetical protein compare
MMP_RS08430 +0.5 1.8 HAD family hydrolase compare
MMP_RS01490 +0.5 1.6 tetratricopeptide repeat protein compare
MMP_RS06760 +0.5 1.8 hypothetical protein compare
MMP_RS07885 +0.5 1.2 tripartite tricarboxylate transporter permease compare
MMP_RS00150 +0.5 1.7 AAA family ATPase compare
MMP_RS07095 +0.5 0.7 PspC domain-containing protein compare
MMP_RS02305 +0.5 3.0 DUF378 domain-containing protein compare
MMP_RS06335 +0.5 2.1 HAD family hydrolase compare
MMP_RS06365 +0.5 0.9 hypothetical protein compare
MMP_RS08610 +0.5 2.0 flagellar protein F compare
MMP_RS08850 +0.5 3.2 hypothetical protein compare
MMP_RS04060 +0.5 2.2 hypothetical protein compare
MMP_RS05720 +0.5 1.6 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06990 +0.5 1.6 CatB-related O-acetyltransferase compare
MMP_RS07550 +0.5 2.4 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS08770 +0.5 2.1 hypothetical protein compare
MMP_RS03385 +0.5 0.4 cation diffusion facilitator family transporter compare
MMP_RS08315 +0.5 0.7 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS07650 +0.5 2.4 TldD/PmbA family protein compare
MMP_RS05715 +0.5 1.7 hypothetical protein compare
MMP_RS06140 +0.5 1.1 radical SAM protein compare
MMP_RS04145 +0.5 0.7 hypothetical protein compare
MMP_RS03840 +0.5 1.7 hypothetical protein compare
MMP_RS02405 +0.5 1.1 hypothetical protein compare
MMP_RS06550 +0.5 1.6 AMP-binding protein compare
MMP_RS01650 +0.5 0.4 sulfurtransferase TusA family protein compare
MMP_RS05985 +0.4 1.1 hypothetical protein compare
MMP_RS01620 +0.4 1.3 hypothetical protein compare
MMP_RS03965 +0.4 0.9 hypothetical protein compare
MMP_RS07570 +0.4 2.3 nucleotidyltransferase family protein compare
MMP_RS02300 +0.4 1.7 NAD(P)H-dependent oxidoreductase compare
MMP_RS02265 +0.4 0.8 nitroreductase family protein compare
MMP_RS04285 +0.4 2.2 Ni/Fe hydrogenase subunit alpha compare
MMP_RS02450 +0.4 1.1 hypothetical protein compare
MMP_RS03080 +0.4 0.7 universal stress protein compare
MMP_RS00700 +0.4 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS06225 +0.4 1.8 DNA double-strand break repair nuclease NurA compare
MMP_RS01690 +0.4 2.2 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05035 +0.4 1.4 hypothetical protein compare
MMP_RS06720 +0.4 1.5 response regulator transcription factor compare
MMP_RS08475 +0.4 1.5 ABC transporter permease compare
MMP_RS01100 +0.4 0.6 ABC transporter ATP-binding protein compare
MMP_RS06765 +0.4 1.3 flap endonuclease-1 compare
MMP_RS06915 +0.4 1.1 metallophosphoesterase compare
MMP_RS08385 +0.4 1.2 ABC transporter substrate-binding protein compare
MMP_RS00090 +0.4 1.3 CoA-binding protein compare
MMP_RS01980 +0.4 2.1 trimeric intracellular cation channel family protein compare
MMP_RS00235 +0.4 1.7 HDIG domain-containing protein compare
MMP_RS00670 +0.4 0.6 TIM barrel protein compare
MMP_RS03235 +0.4 1.4 tRNA pseudouridine(13) synthase TruD compare
MMP_RS01130 +0.4 1.7 flavoprotein compare
MMP_RS06100 +0.4 1.8 GNAT family N-acetyltransferase compare
MMP_RS01120 +0.4 1.2 permease compare
MMP_RS01165 +0.4 1.2 DUF434 domain-containing protein compare
MMP_RS03100 +0.4 1.1 hypothetical protein compare
MMP_RS02770 +0.4 0.9 hypothetical protein compare
MMP_RS04290 +0.4 1.4 4Fe-4S binding protein compare
MMP_RS00145 +0.4 1.9 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS05140 +0.4 0.8 helix-turn-helix transcriptional regulator compare
MMP_RS06535 +0.4 1.2 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS02025 +0.4 2.0 DNA-directed DNA polymerase compare
MMP_RS08245 +0.4 1.4 DUF4013 domain-containing protein compare
MMP_RS07590 +0.4 1.9 hypothetical protein compare
MMP_RS08640 +0.4 1.5 TIM barrel protein compare
MMP_RS01210 +0.4 1.5 sodium:solute symporter compare
MMP_RS08230 +0.4 1.2 50S ribosomal protein L11 methyltransferase compare
MMP_RS06920 +0.4 1.4 AAA family ATPase compare
MMP_RS07560 +0.3 1.0 prefoldin subunit alpha compare
MMP_RS01435 +0.3 0.9 DMT family transporter compare
MMP_RS07715 +0.3 1.8 YfcE family phosphodiesterase compare
MMP_RS07140 +0.3 2.1 TIGR00341 family protein compare
MMP_RS01195 +0.3 0.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08500 +0.3 0.8 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS02310 +0.3 0.4 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00125 +0.3 0.4 DUF2798 domain-containing protein compare
MMP_RS06585 +0.3 0.5 DMT family protein compare
MMP_RS07765 +0.3 1.5 sodium:alanine symporter family protein compare
MMP_RS08755 +0.3 1.8 sodium:solute symporter family protein compare
MMP_RS01125 +0.3 0.9 thioredoxin family protein compare
MMP_RS06530 +0.3 0.9 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS05830 +0.3 0.8 peptidyl-prolyl cis-trans isomerase compare
MMP_RS03675 +0.3 1.4 RimK family alpha-L-glutamate ligase compare
MMP_RS04415 +0.3 1.2 peptide-methionine (S)-S-oxide reductase MsrA compare
MMP_RS03305 +0.3 1.3 winged helix-turn-helix domain-containing protein compare
MMP_RS08290 +0.3 1.4 DNA-binding protein Alba compare
MMP_RS08205 +0.3 1.1 stage II sporulation protein M compare
MMP_RS01745 +0.3 1.1 AMP phosphorylase compare
MMP_RS00135 +0.3 1.1 DUF2121 domain-containing protein compare
MMP_RS06250 +0.3 1.1 hypothetical protein compare
MMP_RS02370 +0.3 1.0 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08160 +0.3 0.8 EamA family transporter compare
MMP_RS05580 +0.3 2.3 glycosyltransferase compare
MMP_RS06745 +0.3 0.7 DUF2119 domain-containing protein compare
MMP_RS06005 +0.3 0.9 heavy-metal-associated domain-containing protein compare
MMP_RS05000 +0.3 1.6 FmdE family protein compare
MMP_RS00650 +0.3 1.4 ABC transporter ATP-binding protein compare
MMP_RS01185 +0.3 1.1 hypothetical protein compare
MMP_RS00645 +0.3 1.3 iron ABC transporter permease compare
MMP_RS02700 +0.3 1.3 formylmethanofuran dehydrogenase subunit C compare
MMP_RS08470 +0.3 1.0 ATP-binding cassette domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For nutrient t2 Mc_vitamins in Methanococcus maripaludis S2

For nutrient t2 Mc_vitamins across organisms