Experiment set4IT044 for Methanococcus maripaludis JJ

Compare to:

Iron excess (2.5x) , H2 media

200 most important genes:

  gene name fitness t score description  
MMJJ_RS02045 -6.0 -2.6 molybdenum cofactor guanylyltransferase compare
MMJJ_RS00580 -5.8 -1.8 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS00600 -5.4 -2.4 hydroxymethylbilane synthase compare
MMJJ_RS01935 -5.2 -3.0 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS00275 -5.1 -2.1 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS09375 -5.0 -1.6 hypothetical protein compare
MMJJ_RS05935 -5.0 -2.0 Era-like GTP-binding protein compare
MMJJ_RS03760 -5.0 -2.7 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS00270 -5.0 -2.5 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS02090 -4.8 -6.1 tyramine--L-glutamate ligase compare
MMJJ_RS04485 -4.8 -9.3 riboflavin synthase compare
MMJJ_RS06625 -4.7 -1.7 pyruvate synthase subunit PorB compare
MMJJ_RS03620 -4.7 -6.8 DUF2097 domain-containing protein compare
MMJJ_RS00210 -4.7 -1.9 DUF530 family protein compare
MMJJ_RS01600 -4.6 -2.2 radical SAM protein compare
MMJJ_RS01810 -4.6 -2.0 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS08035 -4.6 -7.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS03615 -4.6 -3.0 cobalt-precorrin-8 methylmutase compare
MMJJ_RS09190 -4.5 -1.4 tryptophan synthase subunit beta compare
MMJJ_RS05995 -4.5 -1.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS07950 -4.5 -2.9 4Fe-4S binding protein compare
MMJJ_RS00570 -4.5 -1.9 ribonuclease P compare
MMJJ_RS03230 -4.5 -4.2 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04995 -4.4 -5.7 Tfx family DNA-binding protein compare
MMJJ_RS04200 -4.4 -7.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS03005 -4.4 -2.5 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS04730 -4.4 -2.1 tyrosine decarboxylase MfnA compare
MMJJ_RS03580 -4.3 -3.0 TIGR00303 family protein compare
MMJJ_RS00560 -4.3 -3.6 homoisocitrate dehydrogenase compare
MMJJ_RS05070 -4.3 -1.7 DNA primase catalytic subunit PriS compare
MMJJ_RS04685 -4.3 -9.9 carbamoyltransferase HypF compare
MMJJ_RS08155 -4.3 -3.4 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS05650 -4.3 -2.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05450 -4.3 -17.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMJJ_RS01870 -4.3 -1.7 methanogenesis marker 15 protein compare
MMJJ_RS01475 -4.2 -1.7 signal recognition particle-docking protein FtsY compare
MMJJ_RS08620 -4.2 -3.8 DUF373 family protein compare
MMJJ_RS02920 -4.2 -2.0 30S ribosomal protein S27ae compare
MMJJ_RS02275 -4.2 -5.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS03125 -4.2 -4.2 GMC oxidoreductase compare
MMJJ_RS01415 -4.2 -2.5 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS04520 -4.2 -7.3 coenzyme F430 synthase compare
MMJJ_RS03270 -4.2 -2.4 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS03095 -4.2 -1.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05810 -4.1 -6.3 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS07945 -4.1 -2.7 4Fe-4S binding protein compare
MMJJ_RS06240 -4.1 -2.5 dihydropteroate synthase-like protein compare
MMJJ_RS02200 -4.1 -12.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS07000 -4.1 -1.5 TrkH family potassium uptake protein compare
MMJJ_RS06040 -4.0 -3.6 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS03200 -4.0 -1.6 uroporphyrinogen-III synthase compare
MMJJ_RS05930 -4.0 -1.6 cell division protein SepF compare
MMJJ_RS06725 -3.9 -15.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06840 -3.9 -2.4 nickel-dependent hydrogenase large subunit compare
MMJJ_RS03670 -3.9 -5.0 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS07980 -3.9 -13.4 biotin synthase BioB compare
MMJJ_RS03895 -3.9 -3.6 hydrogenase expression/formation protein HypE compare
MMJJ_RS06155 -3.8 -6.0 phosphatidylglycerophosphatase A compare
MMJJ_RS00355 -3.8 -2.4 ribonuclease P protein component 4 compare
MMJJ_RS03055 -3.8 -2.7 hypothetical protein compare
MMJJ_RS06695 -3.8 -2.9 amidohydrolase compare
MMJJ_RS06220 -3.8 -5.5 polyamine aminopropyltransferase compare
MMJJ_RS04155 -3.8 -7.2 hypothetical protein compare
MMJJ_RS08340 -3.8 -7.1 archaeoflavoprotein AfpA compare
MMJJ_RS06875 -3.8 -2.4 hypothetical protein compare
MMJJ_RS04675 -3.8 -7.6 thiamine pyrophosphate-binding protein compare
MMJJ_RS05490 -3.8 -1.9 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS00645 -3.8 -12.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03820 -3.7 -4.4 hydrogenase formation protein HypD compare
MMJJ_RS08660 -3.7 -2.8 acetylornithine transaminase compare
MMJJ_RS03150 -3.7 -7.3 2-phospho-L-lactate transferase compare
MMJJ_RS00205 -3.7 -5.1 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS06700 -3.7 -5.1 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS06730 -3.7 -7.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS03840 -3.7 -4.2 DHH family phosphoesterase compare
MMJJ_RS05770 -3.7 -2.0 flagellar protein D compare
MMJJ_RS03660 -3.7 -3.9 DUF447 family protein compare
MMJJ_RS08840 -3.7 -4.7 calcium/sodium antiporter compare
MMJJ_RS05590 -3.7 -1.8 homoserine dehydrogenase compare
MMJJ_RS07410 -3.7 -3.9 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07350 -3.6 -2.5 4Fe-4S binding protein compare
MMJJ_RS07370 -3.6 -5.6 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS01755 -3.6 -1.7 ferrous iron transport protein B compare
MMJJ_RS06175 -3.6 -2.0 DUF1743 domain-containing protein compare
MMJJ_RS03245 -3.6 -1.3 UMP kinase compare
MMJJ_RS08095 -3.6 -4.3 cobyric acid synthase CobQ compare
MMJJ_RS08250 -3.6 -8.2 hydrogenase maturation peptidase HycI compare
MMJJ_RS04800 -3.6 -6.3 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS05225 -3.6 -0.9 Gar1/Naf1 family protein compare
MMJJ_RS08020 -3.5 -8.8 nucleotidyltransferase domain-containing protein compare
MMJJ_RS01355 -3.5 -2.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS05620 -3.5 -4.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS04970 -3.5 -1.7 DUF655 domain-containing protein compare
MMJJ_RS06510 -3.5 -2.5 LL-diaminopimelate aminotransferase compare
MMJJ_RS03875 -3.5 -3.7 CBS domain-containing protein compare
MMJJ_RS08010 -3.5 -8.7 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS08575 -3.5 -3.8 hypothetical protein compare
MMJJ_RS08080 -3.5 -9.6 TIGR00300 family protein compare
MMJJ_RS06250 -3.5 -1.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS02040 -3.4 -1.9 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS06110 -3.4 -1.5 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS04790 -3.4 -4.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS05330 -3.4 -1.6 DNA polymerase II large subunit compare
MMJJ_RS00450 -3.4 -1.7 DUF126 domain-containing protein compare
MMJJ_RS08055 -3.4 -8.9 methanogenesis marker 14 protein compare
MMJJ_RS04650 -3.4 -6.9 nitrogenase iron protein compare
MMJJ_RS08850 -3.4 -2.0 succinate dehydrogenase/fumarate reductase iron-sulfur subunit compare
MMJJ_RS06390 -3.4 -1.6 NADPH-dependent F420 reductase compare
MMJJ_RS03785 -3.3 -2.2 hypothetical protein compare
MMJJ_RS06490 -3.3 -2.7 methanogenesis marker 2 protein compare
MMJJ_RS01690 -3.3 -3.2 methanogenesis marker 12 protein compare
MMJJ_RS07380 -3.3 -8.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS07720 -3.3 -2.0 UPF0058 family protein compare
MMJJ_RS08625 -3.3 -8.1 magnesium/cobalt transporter CorA compare
MMJJ_RS00370 -3.3 -1.6 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS06270 -3.2 -10.0 dethiobiotin synthase compare
MMJJ_RS03190 -3.2 -2.2 phosphopyruvate hydratase compare
MMJJ_RS08535 -3.2 -3.4 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS06260 -3.2 -7.6 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS03830 -3.2 -11.9 CBS domain-containing protein compare
MMJJ_RS05950 -3.1 -3.2 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS03225 -3.1 -2.9 4Fe-4S binding protein compare
MMJJ_RS04700 -3.1 -6.2 deoxyhypusine synthase compare
MMJJ_RS03650 -3.1 -7.7 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS00235 -3.1 -14.1 hypothetical protein compare
MMJJ_RS05295 -3.1 -12.4 cobyrinic acid a,c-diamide synthase compare
MMJJ_RS06375 -3.1 -3.4 UbiX family flavin prenyltransferase compare
MMJJ_RS05260 -3.1 -6.3 ATP-grasp domain-containing protein compare
MMJJ_RS00475 -3.1 -1.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS09130 -3.1 -1.5 NFYB/HAP3 family transcription factor subunit compare
MMJJ_RS05610 -3.1 -4.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS03865 -3.1 -1.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS01880 -3.1 -2.8 RlmE family RNA methyltransferase compare
MMJJ_RS01750 -3.0 -2.7 ferrous iron transport protein A compare
MMJJ_RS07190 -3.0 -3.8 RtcB family protein compare
MMJJ_RS06265 -3.0 -12.7 8-amino-7-oxononanoate synthase compare
MMJJ_RS09135 -3.0 -8.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMJJ_RS04145 -3.0 -8.6 glutamate-1-semialdehyde 2,1-aminomutase compare
MMJJ_RS07155 -3.0 -9.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS07725 -3.0 -6.0 DNA primase DnaG compare
MMJJ_RS03170 -3.0 -7.5 DUF5612 domain-containing protein compare
MMJJ_RS05720 -3.0 -2.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS04975 -2.9 -1.6 glycosyltransferase family 4 protein compare
MMJJ_RS01410 -2.9 -6.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS03110 -2.9 -4.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS04475 -2.9 -3.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS04670 -2.9 -4.1 DUF2117 domain-containing protein compare
MMJJ_RS00215 -2.9 -2.3 CCA tRNA nucleotidyltransferase compare
MMJJ_RS08320 -2.9 -2.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS06760 -2.8 -4.7 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS07705 -2.8 -3.3 GTP-binding protein EngB compare
MMJJ_RS06880 -2.8 -1.4 EhaG family protein compare
MMJJ_RS06905 -2.8 -1.9 hypothetical protein compare
MMJJ_RS07245 -2.8 -5.3 amidohydrolase family protein compare
MMJJ_RS06715 -2.8 -10.3 lactaldehyde dehydrogenase compare
MMJJ_RS01200 -2.8 -2.5 PRC-barrel domain-containing protein compare
MMJJ_RS06600 -2.7 -1.7 DUF555 domain-containing protein compare
MMJJ_RS09175 -2.7 -1.2 anthranilate synthase component I compare
MMJJ_RS03310 -2.7 -3.7 hypothetical protein compare
MMJJ_RS04010 -2.7 -5.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS04110 -2.7 -6.0 hypothetical protein compare
MMJJ_RS01350 -2.7 -7.2 sodium:proton antiporter compare
MMJJ_RS07785 -2.7 -2.6 fumarate reductase subunit A compare
MMJJ_RS05360 -2.7 -5.9 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS07375 -2.6 -8.3 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMJJ_RS08925 -2.6 -12.7 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS06180 -2.6 -2.3 tryptophan--tRNA ligase compare
MMJJ_RS06805 -2.6 -2.4 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS06255 -2.6 -5.0 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06215 -2.6 -4.4 agmatinase compare
MMJJ_RS07160 -2.6 -15.3 M20 family metallo-hydrolase compare
MMJJ_RS01830 -2.6 -3.6 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS06865 -2.6 -3.0 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS07455 -2.5 -6.5 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS05065 -2.5 -2.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS01345 -2.5 -4.1 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS06750 -2.5 -1.7 homoaconitase large subunit compare
MMJJ_RS06170 -2.5 -9.3 hypothetical protein compare
MMJJ_RS05380 -2.5 -1.1 hypothetical protein compare
MMJJ_RS02055 -2.5 -11.0 GTP 3',8-cyclase MoaA compare
MMJJ_RS03845 -2.5 -5.2 translation initiation factor IF-2 compare
MMJJ_RS07875 -2.5 -1.5 FAD-dependent oxidoreductase compare
MMJJ_RS06225 -2.5 -1.8 adenosylmethionine decarboxylase compare
MMJJ_RS04655 -2.4 -5.0 FAD-dependent oxidoreductase compare
MMJJ_RS05655 -2.4 -4.2 HisA/HisF family protein compare
MMJJ_RS07430 -2.4 -2.3 ribonuclease VapC compare
MMJJ_RS07585 -2.4 -8.1 DHH family phosphoesterase compare
MMJJ_RS04980 -2.4 -3.3 bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase compare
MMJJ_RS05415 -2.4 -1.3 hypothetical protein compare
MMJJ_RS03995 -2.4 -5.5 PHP domain-containing protein compare
MMJJ_RS03815 -2.4 -1.8 nascent polypeptide-associated complex protein compare
MMJJ_RS05540 -2.4 -14.0 LysR family transcriptional regulator compare
MMJJ_RS04750 -2.4 -7.7 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS06485 -2.4 -2.3 phosphoglycerate kinase compare
MMJJ_RS03965 -2.4 -1.3 DNA-directed RNA polymerase subunit L compare
MMJJ_RS03295 -2.3 -11.7 PHP domain-containing protein compare
MMJJ_RS07355 -2.3 -5.3 MoaD/ThiS family protein compare
MMJJ_RS06705 -2.3 -3.9 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS08905 -2.3 -10.7 YcaO-related McrA-glycine thioamidation protein compare
MMJJ_RS06650 -2.2 -11.4 cell division protein FtsZ compare


Specific Phenotypes

For 4 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis JJ

For iron Iron (II) chloride tetrahydrate across organisms